Experiment set7S416 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete Sodium phosphite dibasic pentahydrate 25 mM

200 most important genes:

  gene name fitness t score description  
MMJJ_RS05590 -4.1 -1.8 homoserine dehydrogenase compare
MMJJ_RS04485 -4.0 -8.5 riboflavin synthase compare
MMJJ_RS03865 -3.7 -1.0 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS06695 -3.5 -1.5 amidohydrolase compare
MMJJ_RS00210 -3.5 -1.2 DUF530 family protein compare
MMJJ_RS07950 -3.4 -1.4 4Fe-4S binding protein compare
MMJJ_RS09175 -3.4 -0.8 anthranilate synthase component I compare
MMJJ_RS08320 -3.3 -1.1 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS02045 -3.3 -1.7 molybdenum cofactor guanylyltransferase compare
MMJJ_RS05575 -3.3 -2.8 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS08575 -3.2 -2.8 hypothetical protein compare
MMJJ_RS08625 -3.2 -4.4 magnesium/cobalt transporter CorA compare
MMJJ_RS03875 -3.2 -2.1 CBS domain-containing protein compare
MMJJ_RS05065 -3.1 -2.9 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS01355 -3.1 -1.5 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS08535 -3.1 -2.5 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS03200 -3.1 -1.1 uroporphyrinogen-III synthase compare
MMJJ_RS08170 -3.0 -1.2 diaminopimelate decarboxylase compare
MMJJ_RS01865 -3.0 -4.6 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS03190 -2.9 -1.3 phosphopyruvate hydratase compare
MMJJ_RS03230 -2.9 -2.4 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS08010 -2.8 -6.5 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS04800 -2.8 -3.6 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS06750 -2.8 -1.0 homoaconitase large subunit compare
MMJJ_RS07360 -2.8 -1.0 TIGR00269 family protein compare
MMJJ_RS03815 -2.8 -0.9 nascent polypeptide-associated complex protein compare
MMJJ_RS06910 -2.8 -1.0 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS05930 -2.7 -0.9 cell division protein SepF compare
MMJJ_RS05415 -2.7 -0.9 hypothetical protein compare
MMJJ_RS06860 -2.7 -1.9 hypothetical protein compare
MMJJ_RS02200 -2.7 -6.5 chorismate pyruvate-lyase family protein compare
MMJJ_RS08660 -2.7 -2.1 acetylornithine transaminase compare
MMJJ_RS03225 -2.7 -2.2 4Fe-4S binding protein compare
MMJJ_RS02040 -2.7 -1.4 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS07715 -2.7 -2.6 UbiD family decarboxylase compare
MMJJ_RS00045 -2.6 -12.7 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMJJ_RS00600 -2.6 -1.7 hydroxymethylbilane synthase compare
MMJJ_RS08020 -2.6 -7.7 nucleotidyltransferase domain-containing protein compare
MMJJ_RS04970 -2.6 -1.4 DUF655 domain-containing protein compare
MMJJ_RS04975 -2.5 -1.4 glycosyltransferase family 4 protein compare
MMJJ_RS08500 -2.5 -4.5 L-sulfolactate dehydrogenase compare
MMJJ_RS06200 -2.4 -1.5 phosphoglycerate dehydrogenase compare
MMJJ_RS05770 -2.4 -1.6 flagellar protein D compare
MMJJ_RS06250 -2.4 -1.6 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS04475 -2.4 -2.8 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS07945 -2.4 -1.4 4Fe-4S binding protein compare
MMJJ_RS06915 -2.4 -10.6 helix-turn-helix domain-containing protein compare
MMJJ_RS03580 -2.4 -1.0 TIGR00303 family protein compare
MMJJ_RS00035 -2.4 -13.4 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMJJ_RS00040 -2.3 -6.6 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS00050 -2.3 -8.3 AAA family ATPase compare
MMJJ_RS00075 -2.3 -8.6 AAA family ATPase compare
MMJJ_RS04685 -2.3 -5.2 carbamoyltransferase HypF compare
MMJJ_RS04150 -2.3 -1.6 DUF5379 domain-containing protein compare
MMJJ_RS00355 -2.2 -2.1 ribonuclease P protein component 4 compare
MMJJ_RS08795 -2.2 -1.6 phosphoglucosamine mutase compare
MMJJ_RS05360 -2.2 -4.1 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS00560 -2.2 -1.8 homoisocitrate dehydrogenase compare
MMJJ_RS04050 -2.1 -0.8 dihydroneopterin aldolase family protein compare
MMJJ_RS08490 -2.1 -3.2 rubrerythrin family protein compare
MMJJ_RS01830 -2.1 -2.1 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS00080 -2.1 -10.4 DUF166 domain-containing protein compare
MMJJ_RS05535 -2.1 -9.9 hypothetical protein compare
MMJJ_RS06180 -2.1 -2.0 tryptophan--tRNA ligase compare
MMJJ_RS00055 -2.1 -6.8 CO dehydrogenase/acetyl-CoA synthase subunit delta compare
MMJJ_RS03785 -2.0 -1.4 hypothetical protein compare
MMJJ_RS00060 -2.0 -11.5 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMJJ_RS08430 -2.0 -4.4 small nuclear ribonucleoprotein compare
MMJJ_RS03660 -2.0 -1.6 DUF447 family protein compare
MMJJ_RS05995 -2.0 -1.3 ATP-binding cassette domain-containing protein compare
MMJJ_RS07350 -2.0 -1.7 4Fe-4S binding protein compare
MMJJ_RS08335 -2.0 -1.2 ABC transporter ATP-binding protein compare
MMJJ_RS00125 -2.0 -1.4 KEOPS complex subunit Cgi121 compare
MMJJ_RS05780 -2.0 -1.8 flagellin compare
MMJJ_RS03765 -2.0 -5.2 hypothetical protein compare
MMJJ_RS04750 -2.0 -6.9 5,10-methenyltetrahydromethanopterin hydrogenase compare
MMJJ_RS05070 -2.0 -1.2 DNA primase catalytic subunit PriS compare
MMJJ_RS06255 -2.0 -4.8 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS06875 -2.0 -1.3 hypothetical protein compare
MMJJ_RS06660 -1.9 -6.3 DUF1188 domain-containing protein compare
MMJJ_RS04655 -1.9 -4.3 FAD-dependent oxidoreductase compare
MMJJ_RS06725 -1.9 -8.1 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS04995 -1.9 -3.2 Tfx family DNA-binding protein compare
MMJJ_RS04200 -1.9 -2.9 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS09035 -1.9 -2.7 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS07155 -1.9 -6.4 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS01870 -1.9 -0.6 methanogenesis marker 15 protein compare
MMJJ_RS06175 -1.8 -1.3 DUF1743 domain-containing protein compare
MMJJ_RS07380 -1.8 -6.1 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS04760 -1.8 -10.1 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMJJ_RS00065 -1.8 -6.4 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS00070 -1.8 -2.0 CooT family nickel-binding protein compare
MMJJ_RS03170 -1.8 -4.7 DUF5612 domain-containing protein compare
MMJJ_RS00270 -1.8 -1.7 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS04010 -1.8 -5.6 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS03895 -1.8 -1.2 hydrogenase expression/formation protein HypE compare
MMJJ_RS05710 -1.8 -3.4 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS01360 -1.8 -0.9 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS04700 -1.8 -3.6 deoxyhypusine synthase compare
MMJJ_RS06705 -1.8 -1.7 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS07000 -1.7 -0.7 TrkH family potassium uptake protein compare
MMJJ_RS07410 -1.7 -1.7 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS07470 -1.7 -0.7 50S ribosome-binding GTPase compare
MMJJ_RS03840 -1.7 -2.0 DHH family phosphoesterase compare
MMJJ_RS07190 -1.7 -2.8 RtcB family protein compare
MMJJ_RS09375 -1.7 -0.6 hypothetical protein compare
MMJJ_RS01405 -1.7 -0.8 proline--tRNA ligase compare
MMJJ_RS01765 -1.7 -5.8 winged helix-turn-helix domain-containing protein compare
MMJJ_RS07665 -1.7 -10.9 formate dehydrogenase subunit alpha compare
MMJJ_RS00275 -1.6 -0.8 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS07705 -1.6 -1.5 GTP-binding protein EngB compare
MMJJ_RS06220 -1.6 -3.2 polyamine aminopropyltransferase compare
MMJJ_RS07670 -1.6 -10.0 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS02935 -1.6 -1.6 DNA-directed RNA polymerase subunit E'' compare
MMJJ_RS09085 -1.6 -6.3 minichromosome maintenance protein MCM compare
MMJJ_RS06835 -1.6 -6.7 4Fe-4S binding protein compare
MMJJ_RS04875 -1.6 -0.6 tRNA-Lys compare
MMJJ_RS04985 -1.6 -1.8 glutamyl-tRNA reductase compare
MMJJ_RS05260 -1.6 -2.7 ATP-grasp domain-containing protein compare
MMJJ_RS02090 -1.6 -2.9 tyramine--L-glutamate ligase compare
MMJJ_RS03140 -1.6 -5.3 tRNA-dihydrouridine synthase compare
MMJJ_RS04565 -1.5 -1.9 sirohydrochlorin nickelochelatase compare
MMJJ_RS08080 -1.5 -4.9 TIGR00300 family protein compare
MMJJ_RS04755 -1.5 -5.9 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMJJ_RS05330 -1.5 -0.6 DNA polymerase II large subunit compare
MMJJ_RS07345 -1.5 -4.4 homocysteine biosynthesis protein compare
MMJJ_RS01755 -1.5 -0.6 ferrous iron transport protein B compare
MMJJ_RS01935 -1.5 -1.4 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS01750 -1.5 -1.0 ferrous iron transport protein A compare
MMJJ_RS06375 -1.5 -2.1 UbiX family flavin prenyltransferase compare
MMJJ_RS05620 -1.5 -1.6 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS07590 -1.5 -6.1 flap endonuclease-1 compare
MMJJ_RS03930 -1.5 -6.8 hypothetical protein compare
MMJJ_RS00195 -1.5 -2.1 precorrin-3B C(17)-methyltransferase compare
MMJJ_RS00645 -1.5 -6.1 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMJJ_RS05135 -1.5 -0.8 50S ribosomal protein L18Ae compare
MMJJ_RS03760 -1.5 -0.9 hydrogenase maturation nickel metallochaperone HypA compare
MMJJ_RS03920 -1.5 -8.1 nickel pincer cofactor biosynthesis protein LarC compare
MMJJ_RS04730 -1.4 -1.1 tyrosine decarboxylase MfnA compare
MMJJ_RS00550 -1.4 -3.7 AIR synthase-related protein compare
MMJJ_RS03110 -1.4 -1.6 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS08155 -1.4 -1.7 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS05190 -1.4 -3.4 gamma carbonic anhydrase family protein compare
MMJJ_RS08340 -1.4 -2.6 archaeoflavoprotein AfpA compare
MMJJ_RS06940 -1.4 -6.3 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS07275 -1.4 -1.2 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS03620 -1.4 -1.9 DUF2097 domain-containing protein compare
MMJJ_RS06510 -1.4 -0.7 LL-diaminopimelate aminotransferase compare
MMJJ_RS03820 -1.4 -1.4 hydrogenase formation protein HypD compare
MMJJ_RS07425 -1.4 -6.3 MBL fold metallo-hydrolase compare
MMJJ_RS00450 -1.4 -0.8 DUF126 domain-containing protein compare
MMJJ_RS04790 -1.4 -1.5 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS00370 -1.4 -0.7 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS05650 -1.4 -0.8 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS00205 -1.4 -2.3 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS07975 -1.4 -4.2 ATP-dependent sacrificial sulfur transferase LarE compare
MMJJ_RS02855 -1.3 -4.6 DEAD/DEAH box helicase compare
MMJJ_RS06490 -1.3 -0.5 methanogenesis marker 2 protein compare
MMJJ_RS06150 -1.3 -2.5 DUF483 domain-containing protein compare
MMJJ_RS08585 -1.3 -3.7 M42 family metallopeptidase compare
MMJJ_RS05420 -1.3 -2.0 DNA-directed DNA polymerase II small subunit compare
MMJJ_RS03655 -1.3 -2.4 replication factor C large subunit compare
MMJJ_RS00285 -1.3 -6.1 UPF0254 family protein compare
MMJJ_RS00935 -1.3 -5.1 nickel pincer cofactor biosynthesis protein LarB compare
MMJJ_RS03150 -1.3 -2.7 2-phospho-L-lactate transferase compare
MMJJ_RS04180 -1.3 -1.3 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS06865 -1.2 -1.1 NADH-quinone oxidoreductase subunit H compare
MMJJ_RS08035 -1.2 -3.9 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS07955 -1.2 -3.9 ThiF family adenylyltransferase compare
MMJJ_RS00425 -1.2 -1.9 hypothetical protein compare
MMJJ_RS05655 -1.2 -2.8 HisA/HisF family protein compare
MMJJ_RS01960 -1.2 -2.8 glycosyltransferase family 2 protein compare
MMJJ_RS06840 -1.2 -1.1 nickel-dependent hydrogenase large subunit compare
MMJJ_RS06260 -1.2 -3.7 6-carboxyhexanoate--CoA ligase compare
MMJJ_RS09030 -1.2 -6.7 hypothetical protein compare
MMJJ_RS05490 -1.2 -1.1 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS05170 -1.2 -4.5 Nif3-like dinuclear metal center hexameric protein compare
MMJJ_RS03205 -1.2 -3.9 metallophosphoesterase compare
MMJJ_RS08230 -1.1 -1.3 ribose-5-phosphate isomerase RpiA compare
MMJJ_RS01200 -1.1 -1.1 PRC-barrel domain-containing protein compare
MMJJ_RS03490 -1.1 -0.8 ribonuclease VapC compare
MMJJ_RS07960 -1.1 -1.2 quinolinate synthase NadA compare
MMJJ_RS00475 -1.1 -0.7 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS05765 -1.1 -0.6 flagellar protein E compare
MMJJ_RS08060 -1.1 -4.1 DNA repair and recombination protein RadA compare
MMJJ_RS01690 -1.1 -1.0 methanogenesis marker 12 protein compare
MMJJ_RS04520 -1.1 -2.0 coenzyme F430 synthase compare
MMJJ_RS05810 -1.1 -2.5 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS04720 -1.1 -1.0 IMP dehydrogenase compare
MMJJ_RS07720 -1.1 -0.6 UPF0058 family protein compare
MMJJ_RS06485 -1.1 -1.1 phosphoglycerate kinase compare
MMJJ_RS03155 -1.1 -4.9 hypothetical protein compare
MMJJ_RS04615 -1.1 -1.5 methanogenesis marker 3 protein compare
MMJJ_RS03095 -1.1 -0.9 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS03430 -1.1 -2.3 winged helix-turn-helix domain-containing protein compare
MMJJ_RS08005 -1.1 -6.5 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMJJ_RS02205 -1.1 -4.9 hypothetical protein compare
MMJJ_RS07725 -1.1 -2.3 DNA primase DnaG compare
MMJJ_RS03115 -1.1 -2.8 sulfopyruvate decarboxylase subunit alpha compare
MMJJ_RS08130 -1.1 -0.4 translation initiation factor IF-2 subunit gamma compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in stress experiments

For stress Sodium phosphite dibasic pentahydrate across organisms