Experiment set7S401 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete Ticarcillin disodium salt 12.5 mM

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS07015 +4.0 2.6 PFL family protein compare
MMJJ_RS07650 +3.5 22.0 formate/nitrite transporter family protein compare
MMJJ_RS08065 +3.0 1.8 precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT compare
MMJJ_RS07660 +2.7 12.9 carbonic anhydrase compare
MMJJ_RS07635 +2.7 15.3 response regulator transcription factor compare
MMJJ_RS00440 +2.6 9.8 selenide, water dikinase SelD compare
MMJJ_RS05160 +2.5 3.6 RNA-binding protein compare
MMJJ_RS07640 +2.4 20.9 cache domain-containing protein compare
MMJJ_RS06945 +2.4 11.3 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMJJ_RS08830 +2.4 3.1 hypothetical protein compare
MMJJ_RS09295 +2.3 1.2 hypothetical protein compare
MMJJ_RS03725 +2.3 2.4 sulfurtransferase TusA family protein compare
MMJJ_RS09120 +2.2 1.3 aspartate kinase compare
MMJJ_RS04415 +2.1 3.4 hypothetical protein compare
MMJJ_RS08810 +1.9 0.9 DUF4040 domain-containing protein compare
MMJJ_RS06050 +1.9 6.9 molybdopterin molybdotransferase MoeA compare
MMJJ_RS06975 +1.8 2.3 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS06925 +1.7 1.6 GMP synthase subunit A compare
MMJJ_RS02190 +1.7 9.1 molybdopterin biosynthesis protein compare
MMJJ_RS06575 +1.6 1.8 prephenate dehydrogenase compare
MMJJ_RS07455 +1.6 3.1 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS01855 +1.6 5.3 MBL fold metallo-hydrolase compare
MMJJ_RS07280 +1.6 4.2 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS02120 +1.5 2.3 DJ-1/PfpI family protein compare
MMJJ_RS08870 +1.5 0.8 2-isopropylmalate synthase compare
MMJJ_RS01915 +1.5 5.0 precorrin-6A reductase compare
MMJJ_RS05540 +1.5 9.8 LysR family transcriptional regulator compare
MMJJ_RS02275 +1.5 2.3 nucleotidyltransferase domain-containing protein compare
MMJJ_RS07040 +1.4 1.1 preprotein translocase subunit SecY compare
MMJJ_RS05595 +1.4 1.4 hypothetical protein compare
MMJJ_RS06535 +1.4 6.3 UPF0104 family protein compare
MMJJ_RS06295 +1.3 4.2 DUF2096 family protein compare
MMJJ_RS06365 +1.3 8.1 methyl coenzyme M reductase-arginine methyltransferase Mmp10 compare
MMJJ_RS08005 +1.3 8.3 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMJJ_RS06950 +1.3 3.4 4-demethylwyosine synthase TYW1 compare
MMJJ_RS06730 +1.3 3.1 ATP-binding cassette domain-containing protein compare
MMJJ_RS08710 +1.3 3.3 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMJJ_RS05400 +1.3 3.3 CoA-binding protein compare
MMJJ_RS00840 +1.3 1.8 hypothetical protein compare
MMJJ_RS04005 +1.2 4.2 acetate--CoA ligase family protein compare
MMJJ_RS00405 +1.2 4.3 flavodoxin family protein compare
MMJJ_RS06655 +1.2 4.1 transcriptional regulator compare
MMJJ_RS00665 +1.2 4.8 lysine 2,3-aminomutase compare
MMJJ_RS01785 +1.2 0.8 50S ribosomal protein L14e compare
MMJJ_RS07935 +1.1 0.8 protein fwdD compare
MMJJ_RS03360 +1.1 0.8 hypothetical protein compare
MMJJ_RS08750 +1.1 4.0 glycosyltransferase compare
MMJJ_RS05685 +1.1 2.8 class III signal peptide-containing protein compare
MMJJ_RS00660 +1.1 3.7 putative beta-lysine N-acetyltransferase compare
MMJJ_RS09020 +1.1 2.2 hypothetical protein compare
MMJJ_RS00900 +1.1 1.8 PC4/YdbC family ssDNA-binding protein compare
MMJJ_RS01375 +1.0 4.3 tetrahydromethanopterin:alpha-L-glutamate ligase compare
MMJJ_RS06540 +1.0 1.1 DUF2120 domain-containing protein compare
MMJJ_RS07270 +1.0 3.0 ribonuclease HII compare
MMJJ_RS06150 +1.0 1.5 DUF483 domain-containing protein compare
MMJJ_RS06700 +1.0 1.8 L-seryl-tRNA(Sec) kinase compare
MMJJ_RS08725 +1.0 3.1 flippase compare
MMJJ_RS05870 +1.0 1.5 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMJJ_RS02985 +0.9 3.9 MBL fold metallo-hydrolase compare
MMJJ_RS06455 +0.9 3.5 YeeE/YedE family protein compare
MMJJ_RS03410 +0.9 1.4 hypothetical protein compare
MMJJ_RS08390 +0.9 1.3 carboxymuconolactone decarboxylase family protein compare
MMJJ_RS03510 +0.9 2.4 acyl-CoA dehydratase activase compare
MMJJ_RS07215 +0.9 4.1 TIGR00341 family protein compare
MMJJ_RS05745 +0.9 3.3 type II/IV secretion system ATPase subunit compare
MMJJ_RS01470 +0.9 1.4 Hsp20/alpha crystallin family protein compare
MMJJ_RS07850 +0.9 4.5 ATP-binding protein compare
MMJJ_RS08730 +0.9 3.5 glycosyltransferase family 4 protein compare
MMJJ_RS01070 +0.9 1.1 PadR family transcriptional regulator compare
MMJJ_RS07775 +0.9 2.6 fluoride efflux transporter CrcB compare
MMJJ_RS07910 +0.9 3.4 CBS domain-containing protein compare
MMJJ_RS05790 +0.9 2.4 flagellin compare
MMJJ_RS01745 +0.9 1.9 metal-dependent transcriptional regulator compare
MMJJ_RS05530 +0.9 1.6 roadblock/LC7 domain-containing protein compare
MMJJ_RS06505 +0.9 1.1 prephenate dehydratase compare
MMJJ_RS05755 +0.9 3.2 flagellar protein G compare
MMJJ_RS06395 +0.9 4.5 sugar phosphate isomerase/epimerase compare
MMJJ_RS08760 +0.9 2.5 glycosyltransferase family 9 protein compare
MMJJ_RS07810 +0.9 2.7 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMJJ_RS02115 +0.9 2.7 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS07260 +0.8 2.6 PspC domain-containing protein compare
MMJJ_RS05740 +0.8 3.3 archaellar assembly protein FlaJ compare
MMJJ_RS00520 +0.8 1.7 PDGLE domain-containing protein compare
MMJJ_RS04105 +0.8 3.6 prepilin peptidase compare
MMJJ_RS05760 +0.8 3.6 flagellar protein F compare
MMJJ_RS02195 +0.8 3.4 AmmeMemoRadiSam system radical SAM enzyme compare
MMJJ_RS03065 +0.8 4.3 CBS domain-containing protein compare
MMJJ_RS07025 +0.8 1.8 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMJJ_RS07185 +0.8 1.1 DUF371 domain-containing protein compare
MMJJ_RS07860 +0.8 2.1 hypothetical protein compare
MMJJ_RS09230 +0.8 1.6 hypothetical protein compare
MMJJ_RS07450 +0.8 1.6 hypothetical protein compare
MMJJ_RS06285 +0.8 2.9 YchF/TatD family DNA exonuclease compare
MMJJ_RS06440 +0.8 2.6 DUF4870 domain-containing protein compare
MMJJ_RS00305 +0.8 1.9 chemotaxis protein CheC compare
MMJJ_RS01970 +0.8 1.8 hypothetical protein compare
MMJJ_RS05435 +0.8 4.4 DUF2254 domain-containing protein compare
MMJJ_RS05335 +0.8 1.7 heavy metal-binding domain-containing protein compare
MMJJ_RS07440 +0.8 2.3 metallophosphoesterase compare
MMJJ_RS05750 +0.8 2.4 flagellar accessory protein FlaH compare
MMJJ_RS04085 +0.8 1.9 class III signal peptide-containing protein compare
MMJJ_RS06055 +0.7 2.4 S-methyl-5-thioribose-1-phosphate isomerase compare
MMJJ_RS01475 +0.7 0.4 signal recognition particle-docking protein FtsY compare
MMJJ_RS06190 +0.7 3.0 7-cyano-7-deazaguanine synthase compare
MMJJ_RS06290 +0.7 2.1 DUF749 domain-containing protein compare
MMJJ_RS02665 +0.7 0.5 methyl-accepting chemotaxis protein compare
MMJJ_RS00630 +0.7 2.4 betaine/proline/choline family ABC transporter ATP-binding protein compare
MMJJ_RS04410 +0.7 1.1 hypothetical protein compare
MMJJ_RS04480 +0.7 0.9 hypothetical protein compare
MMJJ_RS05245 +0.7 2.5 type II secretion system F family protein compare
MMJJ_RS07210 +0.7 2.8 AmmeMemoRadiSam system protein B compare
MMJJ_RS06470 +0.7 2.5 tripartite tricarboxylate transporter permease compare
MMJJ_RS00765 +0.7 2.7 DUF4013 domain-containing protein compare
MMJJ_RS04815 +0.7 1.4 TIM barrel protein compare
MMJJ_RS03345 +0.7 1.3 hypothetical protein compare
MMJJ_RS07680 +0.7 2.1 glucose-6-phosphate isomerase compare
MMJJ_RS04375 +0.7 0.9 hypothetical protein compare
MMJJ_RS08885 +0.7 2.4 cysteine--tRNA ligase compare
MMJJ_RS07435 +0.7 3.3 SMC family ATPase compare
MMJJ_RS06675 +0.7 2.4 TIGR01212 family radical SAM protein compare
MMJJ_RS06800 +0.7 1.1 prefoldin subunit alpha compare
MMJJ_RS01300 +0.7 2.4 MarR family transcriptional regulator compare
MMJJ_RS01125 +0.7 1.0 hypothetical protein compare
MMJJ_RS02340 +0.7 2.3 SAM-dependent methyltransferase compare
MMJJ_RS08125 +0.7 3.3 DNA double-strand break repair nuclease NurA compare
MMJJ_RS05900 +0.7 2.7 ATP-binding cassette domain-containing protein compare
MMJJ_RS05495 +0.7 2.3 MinD/ParA family protein compare
MMJJ_RS09250 +0.7 1.2 hypothetical protein compare
MMJJ_RS07905 +0.6 1.7 DUF89 domain-containing protein compare
MMJJ_RS08380 +0.6 1.0 hypothetical protein compare
MMJJ_RS06805 +0.6 0.6 monovalent cation/H+ antiporter subunit E compare
MMJJ_RS08250 +0.6 1.7 hydrogenase maturation peptidase HycI compare
MMJJ_RS05820 +0.6 1.2 DUF2304 domain-containing protein compare
MMJJ_RS05345 +0.6 2.1 ATP-dependent Clp protease proteolytic subunit compare
MMJJ_RS02315 +0.6 2.1 magnesium chelatase compare
MMJJ_RS00950 +0.6 1.3 DUF111 family protein compare
MMJJ_RS05605 +0.6 1.2 hypothetical protein compare
MMJJ_RS03835 +0.6 1.0 DUF504 domain-containing protein compare
MMJJ_RS05645 +0.6 1.0 4Fe-4S binding protein compare
MMJJ_RS01320 +0.6 1.8 indolepyruvate ferredoxin oxidoreductase subunit alpha compare
MMJJ_RS03285 +0.6 1.0 gamma-glutamylcyclotransferase compare
MMJJ_RS07240 +0.6 2.9 MBL fold metallo-hydrolase compare
MMJJ_RS02305 +0.6 2.0 hypothetical protein compare
MMJJ_RS01850 +0.6 1.4 RNA 2',3'-cyclic phosphodiesterase compare
MMJJ_RS01990 +0.6 1.4 universal stress protein compare
MMJJ_RS07485 +0.6 2.0 DedA family protein compare
MMJJ_RS04195 +0.6 1.7 XTP/dITP diphosphatase compare
MMJJ_RS06120 +0.6 2.2 DUF4013 domain-containing protein compare
MMJJ_RS01520 +0.6 0.8 helix-turn-helix transcriptional regulator compare
MMJJ_RS04535 +0.6 2.3 coenzyme gamma-F420-2:alpha-L-glutamate ligase compare
MMJJ_RS04250 +0.6 1.3 thioredoxin family protein compare
MMJJ_RS03455 +0.6 2.6 DUF4868 domain-containing protein compare
MMJJ_RS08630 +0.6 1.2 signal recognition particle subunit SRP19/SEC65 family protein compare
MMJJ_RS04055 +0.6 0.8 hypothetical protein compare
MMJJ_RS07690 +0.6 1.8 glycosyltransferase family 4 protein compare
MMJJ_RS00415 +0.6 0.9 DedA family protein compare
MMJJ_RS05200 +0.5 2.7 TIGR04013 family B12-binding domain/radical SAM domain-containing protein compare
MMJJ_RS00830 +0.5 1.4 corrinoid protein compare
MMJJ_RS06400 +0.5 0.8 FumA C-terminus/TtdB family hydratase beta subunit compare
MMJJ_RS03575 +0.5 1.5 NUDIX hydrolase compare
MMJJ_RS09245 +0.5 1.3 hypothetical protein compare
MMJJ_RS06770 +0.5 2.2 hypothetical protein compare
MMJJ_RS03375 +0.5 0.8 hypothetical protein compare
MMJJ_RS00715 +0.5 1.5 DUF1847 domain-containing protein compare
MMJJ_RS07665 +0.5 3.9 formate dehydrogenase subunit alpha compare
MMJJ_RS04325 +0.5 1.5 tyrosine-type recombinase/integrase compare
MMJJ_RS04450 +0.5 1.5 diphthamide biosynthesis enzyme Dph2 compare
MMJJ_RS06430 +0.5 1.1 haloacid dehalogenase compare
MMJJ_RS08905 +0.5 2.0 YcaO-related McrA-glycine thioamidation protein compare
MMJJ_RS07865 +0.5 1.0 zinc ribbon domain-containing protein compare
MMJJ_RS05560 +0.5 0.6 30S ribosomal protein S27e compare
MMJJ_RS04725 +0.5 1.8 branched-chain-amino-acid transaminase compare
MMJJ_RS07655 +0.5 2.8 hypothetical protein compare
MMJJ_RS03720 +0.5 1.2 DsrE family protein compare
MMJJ_RS02055 +0.5 2.2 GTP 3',8-cyclase MoaA compare
MMJJ_RS02870 +0.5 1.1 hypothetical protein compare
MMJJ_RS07645 +0.5 1.3 selenium-binding protein compare
MMJJ_RS04120 +0.5 1.2 amino acid ABC transporter ATP-binding protein compare
MMJJ_RS01975 +0.5 1.8 diphthine synthase compare
MMJJ_RS07670 +0.5 3.3 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS05695 +0.5 1.2 class III signal peptide-containing protein compare
MMJJ_RS06650 +0.5 2.0 cell division protein FtsZ compare
MMJJ_RS03300 +0.5 1.7 RNA ligase compare
MMJJ_RS00760 +0.5 1.6 hypothetical protein compare
MMJJ_RS05705 +0.5 1.7 hypothetical protein compare
MMJJ_RS01510 +0.5 1.8 ATP-binding protein compare
MMJJ_RS06460 +0.5 1.3 cytochrome c compare
MMJJ_RS05510 +0.5 1.4 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS05410 +0.5 1.1 RecB-family nuclease compare
MMJJ_RS02125 +0.4 0.4 hypothetical protein compare
MMJJ_RS03545 +0.4 1.5 flagella protein F compare
MMJJ_RS06205 +0.4 1.3 EamA family transporter compare
MMJJ_RS04465 +0.4 1.6 MTAP family purine nucleoside phosphorylase compare
MMJJ_RS00175 +0.4 1.5 cytochrome c biogenesis CcdA family protein compare
MMJJ_RS08655 +0.4 1.8 phospholipase D-like domain-containing protein compare
MMJJ_RS01260 +0.4 1.7 hypothetical protein compare
MMJJ_RS03530 +0.4 1.9 phosphate ABC transporter substrate-binding protein compare
MMJJ_RS00290 +0.4 1.5 CheF family chemotaxis protein compare
MMJJ_RS08260 +0.4 1.4 ABC transporter ATP-binding protein compare
MMJJ_RS06520 +0.4 1.5 TldD/PmbA family protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in stress experiments

For stress Ticarcillin disodium salt across organisms