Experiment set7S389 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete no stress control

200 most important genes:

  gene name fitness t score description  
MMJJ_RS00570 -4.2 -1.1 ribonuclease P compare
MMJJ_RS00370 -3.9 -1.2 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS07950 -3.7 -1.5 4Fe-4S binding protein compare
MMJJ_RS09375 -3.7 -1.0 hypothetical protein compare
MMJJ_RS05935 -3.7 -1.2 Era-like GTP-binding protein compare
MMJJ_RS09175 -3.6 -0.8 anthranilate synthase component I compare
MMJJ_RS07505 -3.6 -0.8 DNA-directed RNA polymerase subunit K compare
MMJJ_RS07035 -3.6 -1.2 glycosyl transferase compare
MMJJ_RS04485 -3.6 -7.1 riboflavin synthase compare
MMJJ_RS02045 -3.6 -1.9 molybdenum cofactor guanylyltransferase compare
MMJJ_RS07350 -3.5 -2.1 4Fe-4S binding protein compare
MMJJ_RS07190 -3.4 -3.1 RtcB family protein compare
MMJJ_RS06250 -3.3 -1.9 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS04475 -3.3 -3.1 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS05575 -3.3 -2.8 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS04970 -3.3 -1.5 DUF655 domain-containing protein compare
MMJJ_RS00050 -3.2 -8.6 AAA family ATPase compare
MMJJ_RS00055 -3.2 -9.3 CO dehydrogenase/acetyl-CoA synthase subunit delta compare
MMJJ_RS07360 -3.2 -1.2 TIGR00269 family protein compare
MMJJ_RS04200 -3.1 -3.2 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS06485 -3.1 -1.3 phosphoglycerate kinase compare
MMJJ_RS05930 -3.0 -1.0 cell division protein SepF compare
MMJJ_RS06390 -3.0 -0.9 NADPH-dependent F420 reductase compare
MMJJ_RS00560 -3.0 -2.1 homoisocitrate dehydrogenase compare
MMJJ_RS03865 -2.9 -1.0 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS00045 -2.9 -13.2 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMJJ_RS08625 -2.8 -5.7 magnesium/cobalt transporter CorA compare
MMJJ_RS06180 -2.8 -2.3 tryptophan--tRNA ligase compare
MMJJ_RS05490 -2.8 -1.2 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS00060 -2.8 -15.0 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMJJ_RS00075 -2.8 -9.4 AAA family ATPase compare
MMJJ_RS00035 -2.8 -13.0 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMJJ_RS06875 -2.7 -1.7 hypothetical protein compare
MMJJ_RS00040 -2.7 -7.2 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS08010 -2.7 -6.3 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS05770 -2.6 -1.7 flagellar protein D compare
MMJJ_RS08535 -2.6 -2.7 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS04800 -2.5 -4.0 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS03875 -2.5 -2.4 CBS domain-containing protein compare
MMJJ_RS08020 -2.5 -6.5 nucleotidyltransferase domain-containing protein compare
MMJJ_RS08795 -2.5 -1.8 phosphoglucosamine mutase compare
MMJJ_RS00065 -2.5 -8.7 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS06915 -2.5 -10.4 helix-turn-helix domain-containing protein compare
MMJJ_RS03230 -2.4 -2.4 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS04730 -2.4 -1.4 tyrosine decarboxylase MfnA compare
MMJJ_RS02200 -2.4 -7.1 chorismate pyruvate-lyase family protein compare
MMJJ_RS04050 -2.4 -0.9 dihydroneopterin aldolase family protein compare
MMJJ_RS07380 -2.4 -6.7 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS06855 -2.4 -0.6 DUF2104 domain-containing protein compare
MMJJ_RS03110 -2.4 -2.2 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS07705 -2.4 -1.5 GTP-binding protein EngB compare
MMJJ_RS08500 -2.4 -6.1 L-sulfolactate dehydrogenase compare
MMJJ_RS06240 -2.4 -1.2 dihydropteroate synthase-like protein compare
MMJJ_RS00070 -2.4 -2.3 CooT family nickel-binding protein compare
MMJJ_RS03150 -2.3 -4.2 2-phospho-L-lactate transferase compare
MMJJ_RS00355 -2.3 -2.3 ribonuclease P protein component 4 compare
MMJJ_RS06910 -2.3 -1.5 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS01935 -2.3 -1.5 O-phosphoseryl-tRNA(Sec) selenium transferase compare
MMJJ_RS00270 -2.3 -2.1 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS03490 -2.3 -1.3 ribonuclease VapC compare
MMJJ_RS03840 -2.3 -2.2 DHH family phosphoesterase compare
MMJJ_RS03270 -2.3 -1.4 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS05710 -2.2 -3.8 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS00125 -2.2 -1.5 KEOPS complex subunit Cgi121 compare
MMJJ_RS02040 -2.2 -1.2 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS05535 -2.2 -9.1 hypothetical protein compare
MMJJ_RS07590 -2.2 -8.8 flap endonuclease-1 compare
MMJJ_RS03190 -2.2 -2.0 phosphopyruvate hydratase compare
MMJJ_RS08575 -2.2 -1.9 hypothetical protein compare
MMJJ_RS00080 -2.2 -9.7 DUF166 domain-containing protein compare
MMJJ_RS06175 -2.1 -1.4 DUF1743 domain-containing protein compare
MMJJ_RS01355 -2.1 -2.4 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS06375 -2.1 -2.4 UbiX family flavin prenyltransferase compare
MMJJ_RS00275 -2.1 -1.0 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS07425 -2.1 -7.2 MBL fold metallo-hydrolase compare
MMJJ_RS04655 -2.1 -5.2 FAD-dependent oxidoreductase compare
MMJJ_RS06840 -2.1 -1.1 nickel-dependent hydrogenase large subunit compare
MMJJ_RS05610 -2.0 -2.9 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS07275 -2.0 -1.3 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS05195 -2.0 -4.2 hypothetical protein compare
MMJJ_RS05620 -2.0 -1.3 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS07000 -2.0 -0.8 TrkH family potassium uptake protein compare
MMJJ_RS05650 -2.0 -1.2 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS04790 -2.0 -2.0 biotin--[acetyl-CoA-carboxylase] ligase compare
MMJJ_RS06860 -2.0 -1.7 hypothetical protein compare
MMJJ_RS04700 -1.9 -4.2 deoxyhypusine synthase compare
MMJJ_RS04150 -1.9 -1.7 DUF5379 domain-containing protein compare
MMJJ_RS06260 -1.9 -4.3 6-carboxyhexanoate--CoA ligase compare
MMJJ_RS06725 -1.9 -8.4 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS06600 -1.9 -1.3 DUF555 domain-containing protein compare
MMJJ_RS03615 -1.9 -1.4 cobalt-precorrin-8 methylmutase compare
MMJJ_RS07155 -1.9 -6.8 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS03785 -1.9 -1.3 hypothetical protein compare
MMJJ_RS05155 -1.9 -2.8 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS06625 -1.8 -0.8 pyruvate synthase subunit PorB compare
MMJJ_RS00935 -1.8 -7.6 nickel pincer cofactor biosynthesis protein LarB compare
MMJJ_RS05330 -1.8 -0.7 DNA polymerase II large subunit compare
MMJJ_RS06255 -1.8 -4.7 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 compare
MMJJ_RS05720 -1.8 -1.7 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS05360 -1.8 -4.4 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS08490 -1.8 -2.4 rubrerythrin family protein compare
MMJJ_RS01865 -1.8 -2.8 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS01415 -1.8 -1.1 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS06220 -1.8 -3.2 polyamine aminopropyltransferase compare
MMJJ_RS06695 -1.8 -1.4 amidohydrolase compare
MMJJ_RS06510 -1.8 -0.6 LL-diaminopimelate aminotransferase compare
MMJJ_RS07945 -1.7 -1.5 4Fe-4S binding protein compare
MMJJ_RS07345 -1.7 -5.3 homocysteine biosynthesis protein compare
MMJJ_RS04760 -1.7 -9.3 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMJJ_RS03125 -1.7 -2.0 GMC oxidoreductase compare
MMJJ_RS09030 -1.7 -9.1 hypothetical protein compare
MMJJ_RS06750 -1.7 -1.1 homoaconitase large subunit compare
MMJJ_RS03765 -1.7 -4.3 hypothetical protein compare
MMJJ_RS06660 -1.7 -5.9 DUF1188 domain-containing protein compare
MMJJ_RS03225 -1.7 -1.7 4Fe-4S binding protein compare
MMJJ_RS01880 -1.7 -1.5 RlmE family RNA methyltransferase compare
MMJJ_RS00475 -1.7 -1.5 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
MMJJ_RS05415 -1.7 -0.9 hypothetical protein compare
MMJJ_RS08430 -1.7 -4.3 small nuclear ribonucleoprotein compare
MMJJ_RS03140 -1.7 -5.6 tRNA-dihydrouridine synthase compare
MMJJ_RS03920 -1.7 -9.0 nickel pincer cofactor biosynthesis protein LarC compare
MMJJ_RS05655 -1.7 -4.2 HisA/HisF family protein compare
MMJJ_RS05190 -1.7 -4.1 gamma carbonic anhydrase family protein compare
MMJJ_RS08055 -1.6 -3.3 methanogenesis marker 14 protein compare
MMJJ_RS00205 -1.6 -2.7 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS04180 -1.6 -1.4 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS08340 -1.6 -3.0 archaeoflavoprotein AfpA compare
MMJJ_RS07975 -1.6 -4.9 ATP-dependent sacrificial sulfur transferase LarE compare
MMJJ_RS06705 -1.6 -2.5 bifunctional NADP phosphatase/NAD kinase compare
MMJJ_RS03815 -1.6 -0.9 nascent polypeptide-associated complex protein compare
MMJJ_RS05070 -1.6 -0.9 DNA primase catalytic subunit PriS compare
MMJJ_RS09035 -1.6 -2.9 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS04985 -1.6 -1.8 glutamyl-tRNA reductase compare
MMJJ_RS00210 -1.5 -1.0 DUF530 family protein compare
MMJJ_RS02855 -1.5 -5.0 DEAD/DEAH box helicase compare
MMJJ_RS05995 -1.5 -1.0 ATP-binding cassette domain-containing protein compare
MMJJ_RS05590 -1.5 -0.7 homoserine dehydrogenase compare
MMJJ_RS06835 -1.5 -6.0 4Fe-4S binding protein compare
MMJJ_RS05170 -1.5 -6.0 Nif3-like dinuclear metal center hexameric protein compare
MMJJ_RS04685 -1.5 -4.1 carbamoyltransferase HypF compare
MMJJ_RS01875 -1.5 -3.5 global nitrogen regulator NrpR compare
MMJJ_RS01830 -1.5 -1.7 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS08230 -1.5 -1.6 ribose-5-phosphate isomerase RpiA compare
MMJJ_RS00645 -1.5 -6.3 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMJJ_RS03930 -1.5 -8.1 hypothetical protein compare
MMJJ_RS06880 -1.5 -0.6 EhaG family protein compare
MMJJ_RS08080 -1.5 -4.8 TIGR00300 family protein compare
MMJJ_RS03895 -1.5 -1.2 hydrogenase expression/formation protein HypE compare
MMJJ_RS06930 -1.5 -1.2 type II methionyl aminopeptidase compare
MMJJ_RS01405 -1.5 -0.5 proline--tRNA ligase compare
MMJJ_RS04720 -1.4 -1.2 IMP dehydrogenase compare
MMJJ_RS03005 -1.4 -1.3 Ni-sirohydrochlorin a,c-diamide reductive cyclase catalytic subunit compare
MMJJ_RS00215 -1.4 -1.1 CCA tRNA nucleotidyltransferase compare
MMJJ_RS08660 -1.4 -1.9 acetylornithine transaminase compare
MMJJ_RS04755 -1.4 -5.0 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMJJ_RS08840 -1.4 -2.3 calcium/sodium antiporter compare
MMJJ_RS03200 -1.4 -0.8 uroporphyrinogen-III synthase compare
MMJJ_RS06635 -1.4 -7.3 4Fe-4S binding protein compare
MMJJ_RS04750 -1.4 -3.7 5,10-methenyltetrahydromethanopterin hydrogenase compare
MMJJ_RS04975 -1.4 -0.9 glycosyltransferase family 4 protein compare
MMJJ_RS04010 -1.3 -4.9 archaeal proteasome endopeptidase complex subunit alpha compare
MMJJ_RS07160 -1.3 -8.5 M20 family metallo-hydrolase compare
MMJJ_RS08170 -1.3 -1.2 diaminopimelate decarboxylase compare
MMJJ_RS01765 -1.3 -4.9 winged helix-turn-helix domain-containing protein compare
MMJJ_RS03820 -1.3 -1.5 hydrogenase formation protein HypD compare
MMJJ_RS06380 -1.3 -2.0 signal recognition particle protein Srp54 compare
MMJJ_RS07245 -1.3 -1.9 amidohydrolase family protein compare
MMJJ_RS03580 -1.3 -1.1 TIGR00303 family protein compare
MMJJ_RS04155 -1.3 -2.7 hypothetical protein compare
MMJJ_RS08620 -1.3 -2.1 DUF373 family protein compare
MMJJ_RS08585 -1.3 -3.8 M42 family metallopeptidase compare
MMJJ_RS03845 -1.3 -2.8 translation initiation factor IF-2 compare
MMJJ_RS06270 -1.2 -4.3 dethiobiotin synthase compare
MMJJ_RS08935 -1.2 -0.6 TIGR00288 family NYN domain-containing protein compare
MMJJ_RS00285 -1.2 -6.3 UPF0254 family protein compare
MMJJ_RS07410 -1.2 -1.5 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS07630 -1.2 -5.8 hypothetical protein compare
MMJJ_RS08335 -1.2 -1.0 ABC transporter ATP-binding protein compare
MMJJ_RS02090 -1.2 -2.2 tyramine--L-glutamate ligase compare
MMJJ_RS00345 -1.2 -4.3 4-hydroxy-tetrahydrodipicolinate reductase compare
MMJJ_RS08035 -1.2 -3.0 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS06715 -1.2 -5.9 lactaldehyde dehydrogenase compare
MMJJ_RS01410 -1.2 -3.2 archaeal proteasome endopeptidase complex subunit beta compare
MMJJ_RS03135 -1.2 -2.6 CBS domain-containing protein compare
MMJJ_RS05420 -1.2 -1.9 DNA-directed DNA polymerase II small subunit compare
MMJJ_RS08470 -1.2 -1.1 ferredoxin family protein compare
MMJJ_RS03660 -1.2 -1.2 DUF447 family protein compare
MMJJ_RS01755 -1.2 -0.6 ferrous iron transport protein B compare
MMJJ_RS08060 -1.2 -4.5 DNA repair and recombination protein RadA compare
MMJJ_RS00550 -1.2 -4.6 AIR synthase-related protein compare
MMJJ_RS06225 -1.2 -0.8 adenosylmethionine decarboxylase compare
MMJJ_RS02235 -1.2 -5.9 DUF123 domain-containing protein compare
MMJJ_RS06830 -1.2 -4.0 4Fe-4S binding protein compare
MMJJ_RS00580 -1.2 -0.6 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS05560 -1.1 -2.5 30S ribosomal protein S27e compare
MMJJ_RS05765 -1.1 -0.5 flagellar protein E compare
MMJJ_RS03965 -1.1 -0.8 DNA-directed RNA polymerase subunit L compare
MMJJ_RS01360 -1.1 -0.8 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMJJ_RS08330 -1.1 -1.0 SufD family Fe-S cluster assembly protein compare
MMJJ_RS00480 -1.1 -5.4 flippase compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in no stress control experiments