Experiment set7S389 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete no stress control

200 most detrimental genes:

  gene name fitness t score description  
MMJJ_RS04005 +2.3 11.4 acetate--CoA ligase family protein compare
MMJJ_RS07015 +2.3 2.2 PFL family protein compare
MMJJ_RS08725 +2.2 10.6 flippase compare
MMJJ_RS03725 +2.2 5.6 sulfurtransferase TusA family protein compare
MMJJ_RS08720 +1.9 10.2 UDP-glucose/GDP-mannose dehydrogenase family protein compare
MMJJ_RS00440 +1.9 8.5 selenide, water dikinase SelD compare
MMJJ_RS05160 +1.8 3.7 RNA-binding protein compare
MMJJ_RS08750 +1.7 9.3 glycosyltransferase compare
MMJJ_RS05950 +1.7 2.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
MMJJ_RS07280 +1.6 6.9 phosphomannomutase/phosphoglucomutase compare
MMJJ_RS06535 +1.6 9.4 UPF0104 family protein compare
MMJJ_RS06945 +1.6 7.9 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMJJ_RS07490 +1.6 2.9 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMJJ_RS08760 +1.6 7.1 glycosyltransferase family 9 protein compare
MMJJ_RS07680 +1.6 7.9 glucose-6-phosphate isomerase compare
MMJJ_RS01785 +1.5 1.6 50S ribosomal protein L14e compare
MMJJ_RS07405 +1.5 4.8 histone family protein compare
MMJJ_RS01210 +1.5 2.1 hypothetical protein compare
MMJJ_RS05750 +1.4 7.0 flagellar accessory protein FlaH compare
MMJJ_RS06110 +1.4 1.7 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC compare
MMJJ_RS01915 +1.3 4.5 precorrin-6A reductase compare
MMJJ_RS07455 +1.3 3.3 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS07635 +1.3 6.7 response regulator transcription factor compare
MMJJ_RS07875 +1.3 1.5 FAD-dependent oxidoreductase compare
MMJJ_RS05595 +1.3 1.7 hypothetical protein compare
MMJJ_RS05745 +1.2 7.5 type II/IV secretion system ATPase subunit compare
MMJJ_RS08730 +1.2 6.7 glycosyltransferase family 4 protein compare
MMJJ_RS05760 +1.2 7.4 flagellar protein F compare
MMJJ_RS05740 +1.2 7.5 archaellar assembly protein FlaJ compare
MMJJ_RS06575 +1.2 0.9 prephenate dehydrogenase compare
MMJJ_RS00415 +1.2 3.6 DedA family protein compare
MMJJ_RS05820 +1.2 5.3 DUF2304 domain-containing protein compare
MMJJ_RS08770 +1.2 5.0 HAD family hydrolase compare
MMJJ_RS08615 +1.2 4.8 oligosaccharide repeat unit polymerase family protein compare
MMJJ_RS05755 +1.2 6.8 flagellar protein G compare
MMJJ_RS08040 +1.2 5.2 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS06650 +1.2 6.7 cell division protein FtsZ compare
MMJJ_RS03070 +1.1 1.7 MetS family NSS transporter small subunit compare
MMJJ_RS08710 +1.1 4.3 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMJJ_RS08775 +1.1 6.0 PfkB family carbohydrate kinase compare
MMJJ_RS03650 +1.1 4.1 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS07440 +1.1 4.9 metallophosphoesterase compare
MMJJ_RS07850 +1.1 7.4 ATP-binding protein compare
MMJJ_RS05510 +1.1 5.7 archaellum operon transcriptional activator EarA family protein compare
MMJJ_RS08125 +1.1 5.6 DNA double-strand break repair nuclease NurA compare
MMJJ_RS07175 +1.0 6.5 DEAD/DEAH box helicase compare
MMJJ_RS07650 +1.0 7.2 formate/nitrite transporter family protein compare
MMJJ_RS08325 +1.0 0.8 glycosyltransferase family 2 protein compare
MMJJ_RS03605 +1.0 3.0 TIGR00297 family protein compare
MMJJ_RS07660 +1.0 5.0 carbonic anhydrase compare
MMJJ_RS05870 +1.0 2.3 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMJJ_RS08785 +1.0 4.5 D-sedoheptulose 7-phosphate isomerase compare
MMJJ_RS05790 +1.0 3.7 flagellin compare
MMJJ_RS07030 +0.9 6.9 hypothetical protein compare
MMJJ_RS00665 +0.9 5.6 lysine 2,3-aminomutase compare
MMJJ_RS06480 +0.9 4.0 hypothetical protein compare
MMJJ_RS05400 +0.9 2.2 CoA-binding protein compare
MMJJ_RS09020 +0.9 2.2 hypothetical protein compare
MMJJ_RS05685 +0.9 3.2 class III signal peptide-containing protein compare
MMJJ_RS06675 +0.9 4.4 TIGR01212 family radical SAM protein compare
MMJJ_RS03585 +0.9 0.6 methanogenesis marker 6 protein compare
MMJJ_RS05505 +0.9 7.6 hypothetical protein compare
MMJJ_RS06700 +0.9 1.9 L-seryl-tRNA(Sec) kinase compare
MMJJ_RS08630 +0.8 3.3 signal recognition particle subunit SRP19/SEC65 family protein compare
MMJJ_RS00300 +0.8 3.2 chemotaxis protein CheC compare
MMJJ_RS06950 +0.8 4.6 4-demethylwyosine synthase TYW1 compare
MMJJ_RS08870 +0.8 0.6 2-isopropylmalate synthase compare
MMJJ_RS08225 +0.8 1.6 peptidylprolyl isomerase compare
MMJJ_RS00885 +0.8 2.2 coenzyme F420-reducing hydrogenase, FrhD protein compare
MMJJ_RS01070 +0.8 0.9 PadR family transcriptional regulator compare
MMJJ_RS04575 +0.8 3.8 DUF116 domain-containing protein compare
MMJJ_RS00420 +0.8 2.9 CBS domain-containing protein compare
MMJJ_RS06365 +0.8 5.8 methyl coenzyme M reductase-arginine methyltransferase Mmp10 compare
MMJJ_RS01855 +0.8 3.9 MBL fold metallo-hydrolase compare
MMJJ_RS07170 +0.8 1.6 pyridoxal phosphate-dependent aminotransferase compare
MMJJ_RS01300 +0.8 3.3 MarR family transcriptional regulator compare
MMJJ_RS08780 +0.8 3.3 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
MMJJ_RS04105 +0.8 5.1 prepilin peptidase compare
MMJJ_RS05540 +0.8 5.8 LysR family transcriptional regulator compare
MMJJ_RS00320 +0.8 2.8 chemotaxis protein CheD compare
MMJJ_RS06975 +0.8 2.1 protein translocase SEC61 complex subunit gamma compare
MMJJ_RS08905 +0.8 3.9 YcaO-related McrA-glycine thioamidation protein compare
MMJJ_RS01565 +0.8 2.0 TIGR00267 family protein compare
MMJJ_RS01375 +0.7 3.3 tetrahydromethanopterin:alpha-L-glutamate ligase compare
MMJJ_RS02340 +0.7 2.3 SAM-dependent methyltransferase compare
MMJJ_RS04480 +0.7 1.5 hypothetical protein compare
MMJJ_RS04040 +0.7 3.0 prefoldin subunit beta compare
MMJJ_RS07640 +0.7 5.9 cache domain-containing protein compare
MMJJ_RS08765 +0.7 4.6 glycosyltransferase family 9 protein compare
MMJJ_RS05785 +0.7 3.2 flagellin compare
MMJJ_RS03515 +0.7 2.3 GPR1/FUN34/YaaH family transporter compare
MMJJ_RS01350 +0.7 1.8 sodium:proton antiporter compare
MMJJ_RS01975 +0.7 2.7 diphthine synthase compare
MMJJ_RS02115 +0.7 2.8 class I SAM-dependent methyltransferase family protein compare
MMJJ_RS07775 +0.7 2.0 fluoride efflux transporter CrcB compare
MMJJ_RS04415 +0.7 1.1 hypothetical protein compare
MMJJ_RS06395 +0.7 3.9 sugar phosphate isomerase/epimerase compare
MMJJ_RS07435 +0.6 4.4 SMC family ATPase compare
MMJJ_RS08715 +0.6 2.1 NAD-dependent epimerase/dehydratase family protein compare
MMJJ_RS02190 +0.6 3.7 molybdopterin biosynthesis protein compare
MMJJ_RS07185 +0.6 0.9 DUF371 domain-containing protein compare
MMJJ_RS03545 +0.6 3.0 flagella protein F compare
MMJJ_RS04195 +0.6 2.5 XTP/dITP diphosphatase compare
MMJJ_RS00305 +0.6 3.1 chemotaxis protein CheC compare
MMJJ_RS04955 +0.6 2.2 tRNA pseudouridine(54/55) synthase Pus10 compare
MMJJ_RS01060 +0.6 1.7 ABC transporter ATP-binding protein compare
MMJJ_RS03830 +0.6 2.4 CBS domain-containing protein compare
MMJJ_RS01035 +0.6 1.4 hypothetical protein compare
MMJJ_RS04350 +0.6 1.8 hypothetical protein compare
MMJJ_RS01515 +0.6 1.1 DUF2178 domain-containing protein compare
MMJJ_RS08655 +0.6 3.2 phospholipase D-like domain-containing protein compare
MMJJ_RS07865 +0.6 2.0 zinc ribbon domain-containing protein compare
MMJJ_RS05885 +0.5 3.7 tungstate ABC transporter substrate-binding protein WtpA compare
MMJJ_RS07905 +0.5 2.3 DUF89 domain-containing protein compare
MMJJ_RS04515 +0.5 3.6 HD domain-containing protein compare
MMJJ_RS08705 +0.5 2.3 AEC family transporter compare
MMJJ_RS02275 +0.5 1.0 nucleotidyltransferase domain-containing protein compare
MMJJ_RS07750 +0.5 1.2 class III signal peptide-containing protein compare
MMJJ_RS03455 +0.5 3.5 DUF4868 domain-containing protein compare
MMJJ_RS06205 +0.5 2.3 EamA family transporter compare
MMJJ_RS01380 +0.5 1.7 DUF1890 domain-containing protein compare
MMJJ_RS06655 +0.5 2.1 transcriptional regulator compare
MMJJ_RS07235 +0.5 3.3 coenzyme F420 hydrogenase subunit alpha compare
MMJJ_RS03530 +0.5 2.7 phosphate ABC transporter substrate-binding protein compare
MMJJ_RS04825 +0.5 3.5 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MMJJ_RS09230 +0.5 1.3 hypothetical protein compare
MMJJ_RS00310 +0.5 2.1 protein-glutamate O-methyltransferase CheR compare
MMJJ_RS04245 +0.5 1.5 flavoprotein compare
MMJJ_RS07910 +0.5 2.7 CBS domain-containing protein compare
MMJJ_RS02195 +0.5 3.0 AmmeMemoRadiSam system radical SAM enzyme compare
MMJJ_RS05005 +0.5 2.5 hypothetical protein compare
MMJJ_RS07610 +0.5 1.4 DUF2119 domain-containing protein compare
MMJJ_RS01110 +0.5 1.1 hypothetical protein compare
MMJJ_RS07210 +0.5 2.3 AmmeMemoRadiSam system protein B compare
MMJJ_RS00960 +0.5 1.7 flavodoxin family protein compare
MMJJ_RS06730 +0.5 1.8 ATP-binding cassette domain-containing protein compare
MMJJ_RS01940 +0.5 1.9 hypothetical protein compare
MMJJ_RS07215 +0.5 3.0 TIGR00341 family protein compare
MMJJ_RS05530 +0.5 1.5 roadblock/LC7 domain-containing protein compare
MMJJ_RS02325 +0.5 2.4 hypothetical protein compare
MMJJ_RS07225 +0.5 2.0 coenzyme F420 hydrogenase subunit gamma compare
MMJJ_RS06800 +0.5 1.5 prefoldin subunit alpha compare
MMJJ_RS00925 +0.5 1.2 hypothetical protein compare
MMJJ_RS01920 +0.5 2.7 phosphoglycerate mutase compare
MMJJ_RS01125 +0.5 1.0 hypothetical protein compare
MMJJ_RS07935 +0.5 0.4 protein fwdD compare
MMJJ_RS08885 +0.5 2.3 cysteine--tRNA ligase compare
MMJJ_RS06440 +0.5 1.8 DUF4870 domain-containing protein compare
MMJJ_RS07595 +0.5 1.5 hypothetical protein compare
MMJJ_RS06050 +0.4 1.8 molybdopterin molybdotransferase MoeA compare
MMJJ_RS03285 +0.4 1.2 gamma-glutamylcyclotransferase compare
MMJJ_RS08830 +0.4 0.8 hypothetical protein compare
MMJJ_RS00180 +0.4 1.2 DNA topoisomerase I compare
MMJJ_RS00400 +0.4 0.9 tautomerase family protein compare
MMJJ_RS05345 +0.4 1.8 ATP-dependent Clp protease proteolytic subunit compare
MMJJ_RS05250 +0.4 1.5 HDIG domain-containing protein compare
MMJJ_RS05105 +0.4 1.4 P-II family nitrogen regulator compare
MMJJ_RS04580 +0.4 2.4 2-phosphosulfolactate phosphatase compare
MMJJ_RS05795 +0.4 2.9 hypothetical protein compare
MMJJ_RS03835 +0.4 0.9 DUF504 domain-containing protein compare
MMJJ_RS04620 +0.4 0.8 homocitrate synthase family protein compare
MMJJ_RS00530 +0.4 1.8 cobalt ECF transporter T component CbiQ compare
MMJJ_RS04785 +0.4 1.8 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS04870 +0.4 0.6 tRNA-Asp compare
MMJJ_RS02120 +0.4 0.8 DJ-1/PfpI family protein compare
MMJJ_RS02985 +0.4 2.2 MBL fold metallo-hydrolase compare
MMJJ_RS08065 +0.4 0.4 precorrin-6Y C5,15-methyltransferase (decarboxylating) subunit CbiT compare
MMJJ_RS05035 +0.4 1.1 4Fe-4S binding protein compare
MMJJ_RS00405 +0.4 1.5 flavodoxin family protein compare
MMJJ_RS00615 +0.4 0.7 nucleoside deaminase compare
MMJJ_RS08320 +0.4 0.3 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS03410 +0.4 0.9 hypothetical protein compare
MMJJ_RS07765 +0.4 1.1 DMT family protein compare
MMJJ_RS00135 +0.4 1.4 FmdE family protein compare
MMJJ_RS06210 +0.4 1.0 hypothetical protein compare
MMJJ_RS06190 +0.4 2.2 7-cyano-7-deazaguanine synthase compare
MMJJ_RS00660 +0.4 2.2 putative beta-lysine N-acetyltransferase compare
MMJJ_RS05495 +0.4 1.9 MinD/ParA family protein compare
MMJJ_RS04210 +0.4 1.3 DUF434 domain-containing protein compare
MMJJ_RS00290 +0.4 1.7 CheF family chemotaxis protein compare
MMJJ_RS08100 +0.4 1.7 hypothetical protein compare
MMJJ_RS00655 +0.4 1.2 CBS domain-containing protein compare
MMJJ_RS00295 +0.4 1.6 response regulator compare
MMJJ_RS03625 +0.4 2.1 DUF63 family protein compare
MMJJ_RS00650 +0.4 1.5 cation:proton antiporter compare
MMJJ_RS03175 +0.4 1.4 zinc metalloprotease HtpX compare
MMJJ_RS09050 +0.4 0.5 hypothetical protein compare
MMJJ_RS00390 +0.4 1.6 proteasome assembly chaperone family protein compare
MMJJ_RS09330 +0.4 0.9 hypothetical protein compare
MMJJ_RS09065 +0.4 1.2 hypothetical protein compare
MMJJ_RS00315 +0.4 1.7 methyl-accepting chemotaxis protein compare
MMJJ_RS04450 +0.4 1.4 diphthamide biosynthesis enzyme Dph2 compare
MMJJ_RS04585 +0.4 1.3 phenylacetate--CoA ligase compare
MMJJ_RS03160 +0.4 1.8 winged helix-turn-helix transcriptional regulator compare
MMJJ_RS03510 +0.4 1.4 acyl-CoA dehydratase activase compare
MMJJ_RS02000 +0.3 1.1 AzlD domain-containing protein compare
MMJJ_RS01315 +0.3 1.3 indolepyruvate oxidoreductase subunit beta compare
MMJJ_RS06460 +0.3 1.4 cytochrome c compare
MMJJ_RS04690 +0.3 1.8 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS09250 +0.3 0.6 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in no stress control experiments