Experiment set7S388 for Methanococcus maripaludis JJ

Compare to:

McCas_formate_complete no stress control

200 most important genes:

  gene name fitness t score description  
MMJJ_RS04485 -5.1 -8.0 riboflavin synthase compare
MMJJ_RS00570 -4.4 -1.4 ribonuclease P compare
MMJJ_RS06905 -4.2 -1.5 hypothetical protein compare
MMJJ_RS04975 -4.2 -1.7 glycosyltransferase family 4 protein compare
MMJJ_RS05575 -4.2 -3.3 2-amino-5-formylamino-6-ribosylaminopyrimidin- 4(3H)-one 5'-monophosphate deformylase compare
MMJJ_RS03865 -4.1 -1.3 phosphoribosyl-AMP cyclohydrolase compare
MMJJ_RS04475 -3.9 -3.9 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
MMJJ_RS00210 -3.9 -1.6 DUF530 family protein compare
MMJJ_RS06695 -3.8 -1.9 amidohydrolase compare
MMJJ_RS09375 -3.8 -1.2 hypothetical protein compare
MMJJ_RS05765 -3.7 -1.0 flagellar protein E compare
MMJJ_RS09175 -3.7 -1.0 anthranilate synthase component I compare
MMJJ_RS00215 -3.6 -1.6 CCA tRNA nucleotidyltransferase compare
MMJJ_RS03490 -3.6 -2.3 ribonuclease VapC compare
MMJJ_RS04150 -3.6 -2.0 DUF5379 domain-containing protein compare
MMJJ_RS01830 -3.5 -2.6 tRNA(Ile)(2)-agmatinylcytidine synthase compare
MMJJ_RS00580 -3.5 -1.1 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofG compare
MMJJ_RS06875 -3.4 -2.4 hypothetical protein compare
MMJJ_RS00125 -3.4 -1.7 KEOPS complex subunit Cgi121 compare
MMJJ_RS00050 -3.3 -7.9 AAA family ATPase compare
MMJJ_RS05720 -3.3 -2.1 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMJJ_RS04700 -3.3 -5.0 deoxyhypusine synthase compare
MMJJ_RS03110 -3.3 -2.6 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase compare
MMJJ_RS06860 -3.3 -2.4 hypothetical protein compare
MMJJ_RS06180 -3.2 -2.7 tryptophan--tRNA ligase compare
MMJJ_RS08500 -3.2 -5.8 L-sulfolactate dehydrogenase compare
MMJJ_RS05535 -3.2 -11.6 hypothetical protein compare
MMJJ_RS02920 -3.2 -1.1 30S ribosomal protein S27ae compare
MMJJ_RS00035 -3.2 -15.3 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMJJ_RS03815 -3.1 -1.2 nascent polypeptide-associated complex protein compare
MMJJ_RS01750 -3.1 -1.4 ferrous iron transport protein A compare
MMJJ_RS00275 -3.1 -1.3 coenzyme F420-0:L-glutamate ligase compare
MMJJ_RS06750 -3.1 -1.3 homoaconitase large subunit compare
MMJJ_RS01880 -3.0 -2.3 RlmE family RNA methyltransferase compare
MMJJ_RS06915 -3.0 -13.3 helix-turn-helix domain-containing protein compare
MMJJ_RS02200 -3.0 -7.0 chorismate pyruvate-lyase family protein compare
MMJJ_RS07950 -3.0 -2.0 4Fe-4S binding protein compare
MMJJ_RS07360 -3.0 -1.3 TIGR00269 family protein compare
MMJJ_RS01865 -3.0 -4.8 peptidyl-tRNA hydrolase Pth2 compare
MMJJ_RS05415 -3.0 -1.2 hypothetical protein compare
MMJJ_RS07000 -3.0 -1.1 TrkH family potassium uptake protein compare
MMJJ_RS00450 -3.0 -1.5 DUF126 domain-containing protein compare
MMJJ_RS03270 -3.0 -1.7 ribosome biogenesis/translation initiation ATPase RLI compare
MMJJ_RS00270 -3.0 -2.5 adenosylcobinamide-GDP ribazoletransferase compare
MMJJ_RS08625 -3.0 -6.3 magnesium/cobalt transporter CorA compare
MMJJ_RS00065 -2.9 -8.4 4Fe-4S dicluster domain-containing protein compare
MMJJ_RS08020 -2.9 -8.1 nucleotidyltransferase domain-containing protein compare
MMJJ_RS08660 -2.9 -2.6 acetylornithine transaminase compare
MMJJ_RS06240 -2.9 -1.3 dihydropteroate synthase-like protein compare
MMJJ_RS08855 -2.8 -3.4 cyclic pyranopterin monophosphate synthase MoaC compare
MMJJ_RS08795 -2.8 -2.2 phosphoglucosamine mutase compare
MMJJ_RS00370 -2.8 -1.7 asparagine synthase (glutamine-hydrolyzing) compare
MMJJ_RS07705 -2.8 -1.5 GTP-binding protein EngB compare
MMJJ_RS02090 -2.8 -3.9 tyramine--L-glutamate ligase compare
MMJJ_RS05995 -2.8 -1.9 ATP-binding cassette domain-containing protein compare
MMJJ_RS01410 -2.7 -6.0 archaeal proteasome endopeptidase complex subunit beta compare
MMJJ_RS07945 -2.7 -1.8 4Fe-4S binding protein compare
MMJJ_RS08490 -2.7 -3.1 rubrerythrin family protein compare
MMJJ_RS00075 -2.7 -8.8 AAA family ATPase compare
MMJJ_RS00060 -2.7 -13.0 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMJJ_RS08010 -2.7 -6.0 phosphoadenosine phosphosulfate reductase family protein compare
MMJJ_RS04685 -2.7 -5.6 carbamoyltransferase HypF compare
MMJJ_RS04730 -2.6 -1.8 tyrosine decarboxylase MfnA compare
MMJJ_RS00045 -2.6 -11.5 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMJJ_RS07190 -2.6 -3.8 RtcB family protein compare
MMJJ_RS03660 -2.6 -1.9 DUF447 family protein compare
MMJJ_RS00080 -2.6 -10.7 DUF166 domain-containing protein compare
MMJJ_RS08080 -2.6 -9.1 TIGR00300 family protein compare
MMJJ_RS08170 -2.6 -1.7 diaminopimelate decarboxylase compare
MMJJ_RS05610 -2.6 -2.8 CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMJJ_RS08320 -2.6 -1.8 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
MMJJ_RS08840 -2.5 -3.4 calcium/sodium antiporter compare
MMJJ_RS04800 -2.5 -4.6 2-phospho-L-lactate guanylyltransferase compare
MMJJ_RS08430 -2.5 -5.0 small nuclear ribonucleoprotein compare
MMJJ_RS06910 -2.5 -1.5 energy-converting NiFe hydrogenase A subunit EhaA compare
MMJJ_RS06835 -2.5 -9.5 4Fe-4S binding protein compare
MMJJ_RS04050 -2.5 -1.1 dihydroneopterin aldolase family protein compare
MMJJ_RS04655 -2.5 -5.6 FAD-dependent oxidoreductase compare
MMJJ_RS00040 -2.5 -6.8 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMJJ_RS04720 -2.5 -1.7 IMP dehydrogenase compare
MMJJ_RS08230 -2.5 -2.6 ribose-5-phosphate isomerase RpiA compare
MMJJ_RS06725 -2.5 -10.4 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMJJ_RS09035 -2.5 -3.5 OB-fold nucleic acid binding domain-containing protein compare
MMJJ_RS06390 -2.5 -1.3 NADPH-dependent F420 reductase compare
MMJJ_RS02045 -2.4 -2.1 molybdenum cofactor guanylyltransferase compare
MMJJ_RS05155 -2.4 -4.3 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMJJ_RS03840 -2.4 -2.3 DHH family phosphoesterase compare
MMJJ_RS07370 -2.4 -4.9 tRNA 4-thiouridine(8) synthase ThiI compare
MMJJ_RS07380 -2.4 -6.6 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMJJ_RS03230 -2.3 -2.9 NAD(P)/FAD-dependent oxidoreductase compare
MMJJ_RS07995 -2.3 -4.3 molybdenum cofactor biosynthesis protein MoaE compare
MMJJ_RS08575 -2.3 -2.6 hypothetical protein compare
MMJJ_RS05445 -2.3 -1.1 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMJJ_RS03060 -2.3 -1.9 methanogenesis marker 7 protein compare
MMJJ_RS01600 -2.3 -1.1 radical SAM protein compare
MMJJ_RS01870 -2.3 -0.9 methanogenesis marker 15 protein compare
MMJJ_RS04875 -2.3 -0.8 tRNA-Lys compare
MMJJ_RS00055 -2.3 -8.5 CO dehydrogenase/acetyl-CoA synthase subunit delta compare
MMJJ_RS05770 -2.2 -1.7 flagellar protein D compare
MMJJ_RS05650 -2.2 -1.1 formylmethanofuran dehydrogenase subunit B compare
MMJJ_RS05490 -2.2 -1.7 imidazole glycerol phosphate synthase subunit HisF compare
MMJJ_RS03095 -2.2 -1.8 bifunctional N(6)-L-threonylcarbamoyladenine synthase/serine/threonine protein kinase compare
MMJJ_RS05590 -2.2 -1.1 homoserine dehydrogenase compare
MMJJ_RS03820 -2.2 -2.2 hydrogenase formation protein HypD compare
MMJJ_RS06220 -2.2 -4.1 polyamine aminopropyltransferase compare
MMJJ_RS08535 -2.1 -2.9 NOL1/NOP2/sun family putative RNA methylase compare
MMJJ_RS03310 -2.1 -2.9 hypothetical protein compare
MMJJ_RS08340 -2.1 -3.9 archaeoflavoprotein AfpA compare
MMJJ_RS01690 -2.1 -1.6 methanogenesis marker 12 protein compare
MMJJ_RS04200 -2.1 -3.8 triphosphoribosyl-dephospho-CoA synthase compare
MMJJ_RS08250 -2.1 -3.9 hydrogenase maturation peptidase HycI compare
MMJJ_RS04760 -2.1 -11.1 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMJJ_RS03785 -2.1 -2.1 hypothetical protein compare
MMJJ_RS05360 -2.0 -4.2 nickel-responsive transcriptional regulator NikR compare
MMJJ_RS05710 -2.0 -3.9 single-stranded-DNA-specific exonuclease RecJ compare
MMJJ_RS01415 -2.0 -1.5 beta-CASP ribonuclease aCPSF1 compare
MMJJ_RS04750 -2.0 -6.3 5,10-methenyltetrahydromethanopterin hydrogenase compare
MMJJ_RS03190 -2.0 -1.8 phosphopyruvate hydratase compare
MMJJ_RS00560 -2.0 -2.0 homoisocitrate dehydrogenase compare
MMJJ_RS01200 -2.0 -1.9 PRC-barrel domain-containing protein compare
MMJJ_RS00205 -2.0 -3.8 adenosylcobinamide-phosphate synthase CbiB compare
MMJJ_RS08055 -2.0 -4.3 methanogenesis marker 14 protein compare
MMJJ_RS04995 -2.0 -3.7 Tfx family DNA-binding protein compare
MMJJ_RS01355 -2.0 -2.3 UDP-N-acetyl-D-mannosamine dehydrogenase compare
MMJJ_RS01755 -1.9 -0.9 ferrous iron transport protein B compare
MMJJ_RS08000 -1.9 -7.5 HesA/MoeB/ThiF family protein compare
MMJJ_RS05190 -1.9 -4.5 gamma carbonic anhydrase family protein compare
MMJJ_RS02040 -1.9 -1.4 Asp-tRNA(Asn) amidotransferase subunit GatC compare
MMJJ_RS00600 -1.9 -2.1 hydroxymethylbilane synthase compare
MMJJ_RS07275 -1.9 -1.7 formate--phosphoribosylaminoimidazolecarboxamide ligase compare
MMJJ_RS06760 -1.9 -2.9 Ni-sirohydrochlorin a,c-diamide synthase compare
MMJJ_RS07245 -1.9 -3.3 amidohydrolase family protein compare
MMJJ_RS00355 -1.9 -2.0 ribonuclease P protein component 4 compare
MMJJ_RS02055 -1.9 -8.0 GTP 3',8-cyclase MoaA compare
MMJJ_RS06840 -1.9 -2.0 nickel-dependent hydrogenase large subunit compare
MMJJ_RS06270 -1.9 -5.7 dethiobiotin synthase compare
MMJJ_RS03150 -1.9 -3.8 2-phospho-L-lactate transferase compare
MMJJ_RS07430 -1.9 -2.3 ribonuclease VapC compare
MMJJ_RS05330 -1.9 -0.9 DNA polymerase II large subunit compare
MMJJ_RS00550 -1.9 -5.7 AIR synthase-related protein compare
MMJJ_RS06510 -1.8 -0.8 LL-diaminopimelate aminotransferase compare
MMJJ_RS05065 -1.8 -2.2 (4-{4-[2-(gamma-L- glutamylamino)ethyl]phenoxymethyl}furan-2-yl)methanamine synthase compare
MMJJ_RS07715 -1.8 -2.6 UbiD family decarboxylase compare
MMJJ_RS06225 -1.8 -1.2 adenosylmethionine decarboxylase compare
MMJJ_RS03295 -1.8 -7.1 PHP domain-containing protein compare
MMJJ_RS05935 -1.8 -1.2 Era-like GTP-binding protein compare
MMJJ_RS05810 -1.8 -3.9 precorrin-4 C(11)-methyltransferase compare
MMJJ_RS07960 -1.8 -1.7 quinolinate synthase NadA compare
MMJJ_RS06250 -1.8 -1.7 nicotinamide-nucleotide adenylyltransferase compare
MMJJ_RS05655 -1.8 -4.7 HisA/HisF family protein compare
MMJJ_RS07355 -1.8 -2.9 MoaD/ThiS family protein compare
MMJJ_RS02855 -1.8 -5.9 DEAD/DEAH box helicase compare
MMJJ_RS03615 -1.8 -1.6 cobalt-precorrin-8 methylmutase compare
MMJJ_RS04755 -1.8 -5.2 5,10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMJJ_RS07155 -1.8 -6.6 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMJJ_RS05620 -1.8 -2.1 CoB--CoM heterodisulfide reductase iron-sulfur subunit A family protein compare
MMJJ_RS00285 -1.8 -7.8 UPF0254 family protein compare
MMJJ_RS03930 -1.8 -7.0 hypothetical protein compare
MMJJ_RS03200 -1.8 -1.1 uroporphyrinogen-III synthase compare
MMJJ_RS08035 -1.8 -5.2 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMJJ_RS09030 -1.8 -9.2 hypothetical protein compare
MMJJ_RS01765 -1.7 -5.2 winged helix-turn-helix domain-containing protein compare
MMJJ_RS01345 -1.7 -3.9 (5-formylfuran-3-yl)methyl phosphate synthase compare
MMJJ_RS04985 -1.7 -2.4 glutamyl-tRNA reductase compare
MMJJ_RS00195 -1.7 -2.3 precorrin-3B C(17)-methyltransferase compare
MMJJ_RS07975 -1.7 -8.6 ATP-dependent sacrificial sulfur transferase LarE compare
MMJJ_RS06660 -1.7 -4.6 DUF1188 domain-containing protein compare
MMJJ_RS07425 -1.7 -6.2 MBL fold metallo-hydrolase compare
MMJJ_RS07980 -1.7 -7.0 biotin synthase BioB compare
MMJJ_RS04595 -1.7 -2.3 hypothetical protein compare
MMJJ_RS08155 -1.7 -2.1 cobalt-precorrin-5B (C(1))-methyltransferase CbiD compare
MMJJ_RS09085 -1.7 -7.7 minichromosome maintenance protein MCM compare
MMJJ_RS06490 -1.7 -0.8 methanogenesis marker 2 protein compare
MMJJ_RS07345 -1.7 -5.3 homocysteine biosynthesis protein compare
MMJJ_RS03670 -1.7 -2.4 precorrin-2 C(20)-methyltransferase compare
MMJJ_RS07955 -1.7 -5.7 ThiF family adenylyltransferase compare
MMJJ_RS00070 -1.7 -2.1 CooT family nickel-binding protein compare
MMJJ_RS07410 -1.7 -2.4 methanogenesis marker protein Mmp4/MtxX compare
MMJJ_RS07670 -1.6 -9.6 Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C-terminal domain compare
MMJJ_RS07665 -1.6 -10.7 formate dehydrogenase subunit alpha compare
MMJJ_RS06940 -1.6 -7.5 metalloregulator ArsR/SmtB family transcription factor compare
MMJJ_RS02205 -1.6 -6.6 hypothetical protein compare
MMJJ_RS06485 -1.6 -1.7 phosphoglycerate kinase compare
MMJJ_RS06635 -1.6 -8.9 4Fe-4S binding protein compare
MMJJ_RS00345 -1.6 -5.5 4-hydroxy-tetrahydrodipicolinate reductase compare
MMJJ_RS05070 -1.6 -1.3 DNA primase catalytic subunit PriS compare
MMJJ_RS00935 -1.6 -6.6 nickel pincer cofactor biosynthesis protein LarB compare
MMJJ_RS03920 -1.6 -7.9 nickel pincer cofactor biosynthesis protein LarC compare
MMJJ_RS06785 -1.6 -5.4 RNA ligase partner protein compare
MMJJ_RS00785 -1.6 -1.6 hypothetical protein compare
MMJJ_RS08620 -1.6 -2.8 DUF373 family protein compare
MMJJ_RS03115 -1.5 -3.5 sulfopyruvate decarboxylase subunit alpha compare
MMJJ_RS01810 -1.5 -1.2 methyl coenzyme M reductase system, component A2 compare
MMJJ_RS08005 -1.5 -8.2 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMJJ_RS01875 -1.5 -3.3 global nitrogen regulator NrpR compare
MMJJ_RS03065 -1.5 -7.3 CBS domain-containing protein compare
MMJJ_RS03655 -1.5 -2.3 replication factor C large subunit compare
MMJJ_RS03155 -1.5 -5.7 hypothetical protein compare
MMJJ_RS00645 -1.4 -6.2 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMJJ_RS03225 -1.4 -1.7 4Fe-4S binding protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis JJ in no stress control experiments