Experiment set7S376 for Enterobacter sp. TBS_079

Compare to:

0.1X LB plate, Mixed culture; Streptomyces collinus SAI_078 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

200 most important genes:

  gene name fitness t score description  
MPMX20_04489 -5.2 -13.5 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_03017 -4.9 -12.3 hypothetical protein compare
MPMX20_04530 -4.7 -15.6 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03019 -4.6 -10.2 hypothetical protein compare
MPMX20_02591 -4.5 -4.4 DNA-binding protein H-NS compare
MPMX20_00105 -4.4 -19.1 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_00108 -4.3 -26.3 hypothetical protein compare
MPMX20_00110 -4.2 -18.7 hypothetical protein compare
MPMX20_00109 -4.1 -22.5 hypothetical protein compare
MPMX20_03020 -4.0 -9.2 hypothetical protein compare
MPMX20_01334 -4.0 -8.9 Phosphoglucomutase compare
MPMX20_04443 -3.9 -2.7 Sec-independent protein translocase protein TatB compare
MPMX20_03015 -3.9 -24.7 Phosphoglucosamine mutase compare
MPMX20_03396 -3.9 -2.7 Nucleoside diphosphate kinase compare
MPMX20_03016 -3.8 -22.2 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_04279 -3.8 -3.7 Shikimate kinase 1 compare
MPMX20_03018 -3.8 -3.7 hypothetical protein compare
MPMX20_04442 -3.7 -2.6 Sec-independent protein translocase protein TatC compare
MPMX20_01350 -3.7 -3.6 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_03021 -3.6 -6.0 hypothetical protein compare
MPMX20_01813 -3.6 -4.2 hypothetical protein compare
MPMX20_01368 -3.4 -2.3 hypothetical protein compare
MPMX20_01950 -3.4 -2.3 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_03215 -3.3 -2.3 NADH-quinone oxidoreductase subunit E compare
MPMX20_03986 -3.3 -3.8 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_04242 -3.2 -2.6 hypothetical protein compare
MPMX20_03390 -3.2 -6.1 Outer membrane protein assembly factor BamB compare
MPMX20_01607 -3.2 -3.1 Outer membrane protein A compare
MPMX20_00136 -3.2 -1.2 hypothetical protein compare
MPMX20_02696 -3.1 -6.9 Murein tetrapeptide carboxypeptidase compare
MPMX20_04768 -3.1 -2.1 hypothetical protein compare
MPMX20_01972 -3.1 -1.2 tRNA-Val compare
MPMX20_04483 -3.1 -2.1 Lipid III flippase compare
MPMX20_03386 -3.1 -1.2 putative protein YfgJ compare
MPMX20_00106 -3.0 -3.6 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_04374 -3.0 -5.0 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_04444 -3.0 -1.7 Sec-independent protein translocase protein TatA compare
MPMX20_02020 -3.0 -11.8 Mannose-6-phosphate isomerase compare
MPMX20_04375 -3.0 -8.4 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_01370 -2.9 -2.0 Peptidoglycan-associated lipoprotein compare
MPMX20_03153 -2.9 -1.9 hypothetical protein compare
MPMX20_00453 -2.9 -2.6 RNA-binding protein Hfq compare
MPMX20_01354 -2.8 -2.7 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_01369 -2.8 -2.0 Tol-Pal system protein TolB compare
MPMX20_00102 -2.8 -2.0 hypothetical protein compare
MPMX20_02737 -2.8 -9.1 Tail-specific protease compare
MPMX20_01367 -2.7 -1.9 Tol-Pal system protein TolR compare
MPMX20_04377 -2.7 -9.0 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_04440 -2.7 -1.8 Transcription antitermination protein RfaH compare
MPMX20_02879 -2.6 -3.2 hypothetical protein compare
MPMX20_02997 -2.6 -4.0 Exodeoxyribonuclease I compare
MPMX20_04730 -2.6 -5.4 hypothetical protein compare
MPMX20_01366 -2.6 -1.8 Tol-Pal system protein TolQ compare
MPMX20_01355 -2.6 -1.0 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_00197 -2.6 -1.7 tRNA-Tyr compare
MPMX20_00111 -2.5 -12.4 hypothetical protein compare
MPMX20_03490 -2.5 -4.5 SsrA-binding protein compare
MPMX20_03010 -2.5 -1.7 UDP-glucose 4-epimerase compare
MPMX20_01958 -2.5 -1.0 Fumarase D compare
MPMX20_03211 -2.5 -2.9 NADH-quinone oxidoreductase subunit I compare
MPMX20_03212 -2.4 -2.9 NADH-quinone oxidoreductase subunit H compare
MPMX20_04275 -2.4 -1.7 Ribulose-phosphate 3-epimerase compare
MPMX20_04626 -2.4 -3.3 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_03408 -2.4 -1.7 Co-chaperone protein HscB compare
MPMX20_00419 -2.4 -8.6 Aspartate ammonia-lyase compare
MPMX20_02768 -2.4 -1.7 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_04650 -2.4 -2.3 tRNA modification GTPase MnmE compare
MPMX20_00258 -2.4 -4.8 Diacylglycerol kinase compare
MPMX20_00241 -2.3 -7.5 Glucose-6-phosphate isomerase compare
MPMX20_00801 -2.3 -3.1 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX20_00998 -2.3 -3.5 Sec translocon accessory complex subunit YajC compare
MPMX20_03208 -2.3 -4.1 NADH-quinone oxidoreductase subunit L compare
MPMX20_03022 -2.3 -1.6 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_00570 -2.3 -11.0 putative BsuMI modification methylase subunit YdiO compare
MPMX20_00745 -2.3 -2.7 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_04140 -2.2 -5.2 Malate dehydrogenase compare
MPMX20_02882 -2.2 -8.6 hypothetical protein compare
MPMX20_01352 -2.2 -5.6 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_02672 -2.2 -9.1 hypothetical protein compare
MPMX20_04133 -2.1 -5.6 Stringent starvation protein A compare
MPMX20_00976 -2.1 -2.9 Pyrroline-5-carboxylate reductase compare
MPMX20_01365 -2.1 -3.1 Acyl-CoA thioester hydrolase YbgC compare
MPMX20_01869 -2.1 -5.2 Succinylglutamate desuccinylase compare
MPMX20_04197 -2.1 -1.4 Trk system potassium uptake protein TrkA compare
MPMX20_03161 -2.1 -3.7 hypothetical protein compare
MPMX20_03210 -2.0 -3.4 NADH-quinone oxidoreductase subunit J compare
MPMX20_01156 -2.0 -3.8 hypothetical protein compare
MPMX20_01542 -2.0 -2.4 Cold shock-like protein CspD compare
MPMX20_03443 -2.0 -5.4 Anti-sigma-E factor RseA compare
MPMX20_03214 -2.0 -4.4 NADH-quinone oxidoreductase subunit F compare
MPMX20_04518 -2.0 -4.2 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_02767 -2.0 -2.7 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_02766 -2.0 -2.3 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_01353 -1.9 -4.0 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_04038 -1.9 -4.5 Glucitol operon repressor compare
MPMX20_00720 -1.9 -1.3 Chaperone protein DnaK compare
MPMX20_01722 -1.9 -1.3 putative csgAB operon transcriptional regulatory protein compare
MPMX20_04731 -1.9 -4.4 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_00831 -1.9 -3.8 RNA polymerase-binding transcription factor DksA compare
MPMX20_04276 -1.9 -3.1 DNA adenine methylase compare
MPMX20_03753 -1.9 -4.1 Tyrosine recombinase XerD compare
MPMX20_01357 -1.9 -3.7 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_04601 -1.9 -1.8 DNA polymerase I compare
MPMX20_04552 -1.8 -3.5 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_03047 -1.8 -3.0 dCTP deaminase compare
MPMX20_03264 -1.8 -3.7 Chorismate synthase compare
MPMX20_04170 -1.8 -2.4 DNA-binding protein Fis compare
MPMX20_03440 -1.8 -2.1 Elongation factor 4 compare
MPMX20_03376 -1.8 -4.4 HTH-type transcriptional regulator MurR compare
MPMX20_04137 -1.8 -3.3 Inner membrane protein YhcB compare
MPMX20_02736 -1.8 -3.6 Protease HtpX compare
MPMX20_03207 -1.8 -3.2 NADH-quinone oxidoreductase subunit M compare
MPMX20_01073 -1.8 -2.2 Nucleoid-associated protein YbaB compare
MPMX20_01567 -1.8 -4.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_02885 -1.7 -5.7 hypothetical protein compare
MPMX20_03435 -1.7 -2.0 Pyridoxine 5'-phosphate synthase compare
MPMX20_00480 -1.7 -2.9 50S ribosomal protein L9 compare
MPMX20_03213 -1.7 -5.2 NADH-quinone oxidoreductase subunit G compare
MPMX20_02899 -1.7 -4.2 hypothetical protein compare
MPMX20_01570 -1.7 -1.2 Integration host factor subunit beta compare
MPMX20_01356 -1.7 -4.2 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_04119 -1.7 -1.2 DNA polymerase III subunit chi compare
MPMX20_01019 -1.7 -4.6 Protoheme IX farnesyltransferase compare
MPMX20_00107 -1.7 -4.4 Lipopolysaccharide core heptosyltransferase RfaQ compare
MPMX20_02098 -1.7 -5.1 HTH-type transcriptional repressor RspR compare
MPMX20_00747 -1.7 -3.8 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_03683 -1.7 -1.1 RecBCD enzyme subunit RecB compare
MPMX20_01386 -1.7 -4.7 UDP-glucose 4-epimerase compare
MPMX20_02355 -1.6 -2.7 D-alanyl-D-alanine dipeptidase compare
MPMX20_03218 -1.6 -2.4 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_03756 -1.6 -3.1 FAD assembly factor SdhE compare
MPMX20_03216 -1.6 -5.4 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_02884 -1.6 -7.9 hypothetical protein compare
MPMX20_00875 -1.6 -3.5 putative protein YaeQ compare
MPMX20_03154 -1.6 -3.1 Inner membrane protein YejM compare
MPMX20_01989 -1.6 -1.6 hypothetical protein compare
MPMX20_03385 -1.6 -2.5 hypothetical protein compare
MPMX20_00134 -1.6 -5.0 Mannitol-1-phosphate 5-dehydrogenase compare
MPMX20_03685 -1.6 -1.1 RecBCD enzyme subunit RecC compare
MPMX20_02891 -1.6 -7.8 hypothetical protein compare
MPMX20_03308 -1.5 -3.6 Cysteine synthase A compare
MPMX20_04463 -1.5 -4.0 DNA helicase II compare
MPMX20_01286 -1.5 -1.4 Sec-independent protein translocase protein TatE compare
MPMX20_00455 -1.5 -6.0 Modulator of FtsH protease HflK compare
MPMX20_02890 -1.5 -6.7 hypothetical protein compare
MPMX20_03355 -1.5 -4.8 Phosphoribosylglycinamide formyltransferase compare
MPMX20_00537 -1.5 -5.7 Trehalose-6-phosphate hydrolase compare
MPMX20_03206 -1.4 -4.4 NADH-quinone oxidoreductase subunit N compare
MPMX20_02496 -1.4 -1.1 Lipopolysaccharide assembly protein A compare
MPMX20_02707 -1.4 -1.8 Septum site-determining protein MinC compare
MPMX20_01866 -1.4 -1.7 Arginine N-succinyltransferase compare
MPMX20_01695 -1.4 -2.4 putative malonic semialdehyde reductase RutE compare
MPMX20_00459 -1.4 -4.9 HTH-type transcriptional repressor NsrR compare
MPMX20_02006 -1.4 -3.0 Ion-translocating oxidoreductase complex subunit E compare
MPMX20_01098 -1.4 -2.5 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_02926 -1.4 -2.7 hypothetical protein compare
MPMX20_03641 -1.4 -4.4 Phosphoadenosine phosphosulfate reductase compare
MPMX20_00266 -1.4 -2.6 Phage shock protein G compare
MPMX20_03487 -1.4 -3.6 Outer membrane protein assembly factor BamE compare
MPMX20_00746 -1.4 -2.3 Protein ApaG compare
MPMX20_00764 -1.4 -1.2 hypothetical protein compare
MPMX20_01023 -1.4 -8.2 Cytochrome bo(3) ubiquinol oxidase subunit 2 compare
MPMX20_02889 -1.4 -7.8 hypothetical protein compare
MPMX20_02477 -1.4 -2.1 Peptide transport system ATP-binding protein SapD compare
MPMX20_03407 -1.4 -1.3 Chaperone protein HscA compare
MPMX20_01135 -1.4 -4.2 HTH-type transcriptional regulator BetI compare
MPMX20_00452 -1.4 -5.9 tRNA dimethylallyltransferase compare
MPMX20_03409 -1.4 -1.3 Iron-binding protein IscA compare
MPMX20_00514 -1.4 -3.5 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_01488 -1.4 -1.3 hypothetical protein compare
MPMX20_01005 -1.4 -2.0 Transcriptional repressor NrdR compare
MPMX20_00085 -1.3 -4.5 tRNA (guanosine(18)-2'-O)-methyltransferase compare
MPMX20_04301 -1.3 -1.8 Fe/S biogenesis protein NfuA compare
MPMX20_02665 -1.3 -3.6 hypothetical protein compare
MPMX20_00749 -1.3 -3.0 Chaperone SurA compare
MPMX20_04642 -1.3 -0.9 Phosphate import ATP-binding protein PstB compare
MPMX20_02646 -1.3 -1.1 hypothetical protein compare
MPMX20_02657 -1.3 -9.1 hypothetical protein compare
MPMX20_04595 -1.3 -0.9 Glutamine synthetase compare
MPMX20_02476 -1.3 -1.2 Putrescine export system permease protein SapC compare
MPMX20_01868 -1.3 -5.3 N-succinylarginine dihydrolase compare
MPMX20_02147 -1.3 -3.9 2,3-dehydroadipyl-CoA hydratase compare
MPMX20_02475 -1.3 -1.9 Putrescine export system permease protein SapB compare
MPMX20_01323 -1.3 -5.1 N-acetylglucosamine-6-phosphate deacetylase compare
MPMX20_01750 -1.3 -3.5 Negative regulator of flagellin synthesis compare
MPMX20_01552 -1.3 -1.7 hypothetical protein compare
MPMX20_04465 -1.3 -2.8 Tyrosine recombinase XerC compare
MPMX20_02227 -1.2 -6.3 hypothetical protein compare
MPMX20_04110 -1.2 -2.9 Nitrogen regulatory protein compare
MPMX20_02919 -1.2 -4.0 hypothetical protein compare
MPMX20_02008 -1.2 -4.7 Ion-translocating oxidoreductase complex subunit D compare
MPMX20_00807 -1.2 -1.2 Pyruvate dehydrogenase E1 component compare
MPMX20_01022 -1.2 -5.3 Cytochrome bo(3) ubiquinol oxidase subunit 1 compare
MPMX20_03267 -1.2 -1.6 Phosphohistidine phosphatase SixA compare
MPMX20_01975 -1.2 -8.3 Cyclopropane-fatty-acyl-phospholipid synthase compare
MPMX20_04462 -1.2 -3.4 Magnesium transport protein CorA compare
MPMX20_02576 -1.2 -1.6 Protein TonB compare
MPMX20_00226 -1.2 -4.3 Bifunctional purine biosynthesis protein PurH compare
MPMX20_03272 -1.2 -3.5 Intermembrane phospholipid transport system lipoprotein MlaA compare
MPMX20_04472 -1.2 -2.2 Protein HemX compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in mixed community experiments

For mixed community Mixed culture; Streptomyces collinus SAI_078 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct across organisms