Experiment set7S369 for Enterobacter sp. TBS_079

1X LB plate, Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

Group: mixed community
Media: LB + Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct
Culturing: Enterobacter_TBS_079_ML3, agar plate, Aerobic, at 30 (C), (Solid)
By: Robin on 3/9/24
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride

Specific Phenotypes

For 8 genes in this experiment

For mixed community Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct in Enterobacter sp. TBS_079

For mixed community Mixed culture; Streptomyces albogriseolus SAI_072 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct across organisms

SEED Subsystems

Subsystem	#Specific
Molybdenum cofactor biosynthesis	3
Transport of Molybdenum	2

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Ubiquinone and menaquinone biosynthesis
• Puromycin biosynthesis
• Methionine metabolism
• Tryptophan metabolism
• Lipopolysaccharide biosynthesis
• Riboflavin metabolism
• Porphyrin and chlorophyll metabolism
• Terpenoid biosynthesis
• Carotenoid biosynthesis - General
• Biosynthesis of terpenoids and steroids

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
demethylmenaquinol-6 biosynthesis I	1	1	1
demethylmenaquinol-8 biosynthesis I	1	1	1
demethylmenaquinol-9 biosynthesis	1	1	1
demethylmenaquinol-4 biosynthesis	1	1	1
molybdenum cofactor biosynthesis	3	3	2
formate to dimethyl sulfoxide electron transfer	2	2	1
menaquinol-10 biosynthesis	2	2	1
menaquinol-12 biosynthesis	2	2	1
NADH to dimethyl sulfoxide electron transfer	2	2	1
menaquinol-11 biosynthesis	2	2	1
menaquinol-13 biosynthesis	2	2	1
menaquinol-7 biosynthesis	2	2	1
hydrogen to dimethyl sulfoxide electron transfer	2	1	1
bis(tungstenpterin) cofactor biosynthesis	4	1	1
molybdopterin biosynthesis	6	6	1
superpathway of demethylmenaquinol-8 biosynthesis I	9	9	1
superpathway of demethylmenaquinol-6 biosynthesis I	9	8	1
superpathway of demethylmenaquinol-9 biosynthesis	9	8	1
superpathway of menaquinol-8 biosynthesis I	10	10	1
superpathway of menaquinol-6 biosynthesis	10	9	1
superpathway of menaquinol-13 biosynthesis	10	9	1
superpathway of menaquinol-9 biosynthesis	10	9	1
superpathway of menaquinol-12 biosynthesis	10	9	1
superpathway of menaquinol-11 biosynthesis	10	9	1
superpathway of menaquinol-7 biosynthesis	10	9	1
superpathway of menaquinol-10 biosynthesis	10	9	1
superpathway of chorismate metabolism	59	54	1