Experiment set7S360 for Enterobacter sp. TBS_079

Compare to:

0.1X LB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

200 most important genes:

  gene name fitness t score description  
MPMX20_00105 -5.3 -21.2 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_04489 -5.0 -18.8 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_03019 -4.9 -14.7 hypothetical protein compare
MPMX20_02591 -4.8 -4.7 DNA-binding protein H-NS compare
MPMX20_03017 -4.8 -16.9 hypothetical protein compare
MPMX20_01334 -4.7 -9.6 Phosphoglucomutase compare
MPMX20_03018 -4.6 -3.2 hypothetical protein compare
MPMX20_00110 -4.5 -20.9 hypothetical protein compare
MPMX20_00109 -4.5 -25.6 hypothetical protein compare
MPMX20_00108 -4.2 -24.7 hypothetical protein compare
MPMX20_03020 -4.2 -12.4 hypothetical protein compare
MPMX20_03021 -4.2 -7.5 hypothetical protein compare
MPMX20_04443 -4.1 -2.8 Sec-independent protein translocase protein TatB compare
MPMX20_04530 -4.1 -13.9 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03016 -3.9 -23.2 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_03154 -3.9 -8.6 Inner membrane protein YejM compare
MPMX20_01368 -3.7 -2.6 hypothetical protein compare
MPMX20_01950 -3.7 -2.6 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_03986 -3.6 -4.8 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_03390 -3.5 -6.4 Outer membrane protein assembly factor BamB compare
MPMX20_03015 -3.4 -21.7 Phosphoglucosamine mutase compare
MPMX20_00106 -3.4 -2.4 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_00764 -3.4 -2.1 hypothetical protein compare
MPMX20_04768 -3.4 -2.3 hypothetical protein compare
MPMX20_00825 -3.3 -2.1 Aspartate 1-decarboxylase compare
MPMX20_00136 -3.3 -1.2 hypothetical protein compare
MPMX20_00998 -3.3 -3.9 Sec translocon accessory complex subunit YajC compare
MPMX20_03153 -3.3 -1.9 hypothetical protein compare
MPMX20_04442 -3.3 -3.9 Sec-independent protein translocase protein TatC compare
MPMX20_01370 -3.2 -2.2 Peptidoglycan-associated lipoprotein compare
MPMX20_04483 -3.2 -2.2 Lipid III flippase compare
MPMX20_04279 -3.2 -4.4 Shikimate kinase 1 compare
MPMX20_01369 -3.1 -2.2 Tol-Pal system protein TolB compare
MPMX20_02767 -3.1 -2.1 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_00453 -3.1 -3.0 RNA-binding protein Hfq compare
MPMX20_02737 -3.1 -15.8 Tail-specific protease compare
MPMX20_01367 -3.0 -2.1 Tol-Pal system protein TolR compare
MPMX20_00102 -3.0 -2.1 hypothetical protein compare
MPMX20_01813 -3.0 -12.1 hypothetical protein compare
MPMX20_03010 -2.9 -2.0 UDP-glucose 4-epimerase compare
MPMX20_03435 -2.9 -2.7 Pyridoxine 5'-phosphate synthase compare
MPMX20_04730 -2.9 -4.3 hypothetical protein compare
MPMX20_02997 -2.8 -6.1 Exodeoxyribonuclease I compare
MPMX20_01355 -2.8 -1.0 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_04440 -2.8 -1.9 Transcription antitermination protein RfaH compare
MPMX20_04639 -2.8 -1.7 Phosphate-binding protein PstS compare
MPMX20_02020 -2.7 -11.8 Mannose-6-phosphate isomerase compare
MPMX20_00747 -2.7 -4.8 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_03022 -2.7 -1.8 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_00197 -2.7 -1.6 tRNA-Tyr compare
MPMX20_04374 -2.6 -3.6 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_00728 -2.6 -1.3 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_03396 -2.6 -4.8 Nucleoside diphosphate kinase compare
MPMX20_01350 -2.5 -3.4 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_01353 -2.5 -5.4 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_04465 -2.5 -3.4 Tyrosine recombinase XerC compare
MPMX20_03213 -2.5 -6.8 NADH-quinone oxidoreductase subunit G compare
MPMX20_00745 -2.4 -3.3 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_00241 -2.4 -8.5 Glucose-6-phosphate isomerase compare
MPMX20_04650 -2.4 -2.8 tRNA modification GTPase MnmE compare
MPMX20_03301 -2.3 -1.8 hypothetical protein compare
MPMX20_02672 -2.3 -11.5 hypothetical protein compare
MPMX20_01352 -2.3 -6.9 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_03264 -2.3 -4.6 Chorismate synthase compare
MPMX20_04626 -2.3 -4.1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_00111 -2.3 -10.8 hypothetical protein compare
MPMX20_02879 -2.3 -3.7 hypothetical protein compare
MPMX20_03212 -2.2 -3.7 NADH-quinone oxidoreductase subunit H compare
MPMX20_04275 -2.2 -2.1 Ribulose-phosphate 3-epimerase compare
MPMX20_03408 -2.2 -2.1 Co-chaperone protein HscB compare
MPMX20_00749 -2.2 -4.6 Chaperone SurA compare
MPMX20_04377 -2.2 -8.6 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_01354 -2.1 -2.9 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_02766 -2.1 -2.9 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_03678 -2.1 -1.5 tRNA-Met compare
MPMX20_02885 -2.1 -6.4 hypothetical protein compare
MPMX20_00720 -2.1 -1.2 Chaperone protein DnaK compare
MPMX20_02768 -2.0 -2.4 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_02476 -2.0 -1.4 Putrescine export system permease protein SapC compare
MPMX20_03309 -2.0 -1.4 Phosphocarrier protein HPr compare
MPMX20_01984 -2.0 -1.4 Ribonuclease T compare
MPMX20_01607 -2.0 -4.0 Outer membrane protein A compare
MPMX20_03210 -2.0 -3.9 NADH-quinone oxidoreductase subunit J compare
MPMX20_03405 -2.0 -1.9 Protein IscX compare
MPMX20_04140 -2.0 -6.2 Malate dehydrogenase compare
MPMX20_02701 -1.9 -1.3 Fatty acid metabolism regulator protein compare
MPMX20_03490 -1.9 -4.7 SsrA-binding protein compare
MPMX20_03498 -1.9 -2.5 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_02696 -1.8 -4.8 Murein tetrapeptide carboxypeptidase compare
MPMX20_01552 -1.8 -2.2 hypothetical protein compare
MPMX20_01366 -1.8 -2.5 Tol-Pal system protein TolQ compare
MPMX20_03214 -1.8 -5.3 NADH-quinone oxidoreductase subunit F compare
MPMX20_04133 -1.8 -4.9 Stringent starvation protein A compare
MPMX20_00030 -1.8 -1.4 hypothetical protein compare
MPMX20_03440 -1.8 -2.7 Elongation factor 4 compare
MPMX20_03217 -1.8 -3.0 NADH-quinone oxidoreductase subunit B compare
MPMX20_01567 -1.8 -5.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_01357 -1.8 -3.6 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_00570 -1.8 -11.3 putative BsuMI modification methylase subunit YdiO compare
MPMX20_03683 -1.8 -1.2 RecBCD enzyme subunit RecB compare
MPMX20_04197 -1.8 -3.1 Trk system potassium uptake protein TrkA compare
MPMX20_02882 -1.8 -6.4 hypothetical protein compare
MPMX20_04731 -1.8 -4.0 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_03385 -1.7 -4.3 hypothetical protein compare
MPMX20_03407 -1.7 -1.2 Chaperone protein HscA compare
MPMX20_04119 -1.7 -1.2 DNA polymerase III subunit chi compare
MPMX20_04100 -1.7 -4.8 Intermembrane phospholipid transport system permease protein MlaE compare
MPMX20_00419 -1.7 -8.3 Aspartate ammonia-lyase compare
MPMX20_02576 -1.7 -2.3 Protein TonB compare
MPMX20_01989 -1.7 -2.2 hypothetical protein compare
MPMX20_02890 -1.7 -8.3 hypothetical protein compare
MPMX20_02086 -1.7 -4.3 hypothetical protein compare
MPMX20_00831 -1.7 -4.3 RNA polymerase-binding transcription factor DksA compare
MPMX20_04668 -1.7 -1.9 hypothetical protein compare
MPMX20_03806 -1.7 -1.6 hypothetical protein compare
MPMX20_03882 -1.7 -6.6 Outer membrane protein TolC compare
MPMX20_03443 -1.7 -3.8 Anti-sigma-E factor RseA compare
MPMX20_03206 -1.6 -5.3 NADH-quinone oxidoreductase subunit N compare
MPMX20_03636 -1.6 -4.1 Adenylyl-sulfate kinase compare
MPMX20_04301 -1.6 -2.4 Fe/S biogenesis protein NfuA compare
MPMX20_04278 -1.6 -3.3 3-dehydroquinate synthase compare
MPMX20_01156 -1.6 -3.2 hypothetical protein compare
MPMX20_00480 -1.6 -2.7 50S ribosomal protein L9 compare
MPMX20_04670 -1.6 -1.1 hypothetical protein compare
MPMX20_03447 -1.6 -5.4 ATP-dependent RNA helicase SrmB compare
MPMX20_03208 -1.6 -4.9 NADH-quinone oxidoreductase subunit L compare
MPMX20_02657 -1.6 -11.6 hypothetical protein compare
MPMX20_03216 -1.6 -6.5 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_04105 -1.6 -1.9 Lipopolysaccharide export system protein LptC compare
MPMX20_04141 -1.6 -4.4 Arginine repressor compare
MPMX20_01974 -1.6 -1.2 Riboflavin synthase compare
MPMX20_04110 -1.6 -3.8 Nitrogen regulatory protein compare
MPMX20_02886 -1.5 -5.2 hypothetical protein compare
MPMX20_02899 -1.5 -4.2 hypothetical protein compare
MPMX20_04309 -1.5 -3.3 Aerobic glycerol-3-phosphate dehydrogenase compare
MPMX20_03310 -1.5 -1.0 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_03756 -1.5 -3.4 FAD assembly factor SdhE compare
MPMX20_02477 -1.5 -2.6 Peptide transport system ATP-binding protein SapD compare
MPMX20_02892 -1.5 -5.1 hypothetical protein compare
MPMX20_02098 -1.5 -5.0 HTH-type transcriptional repressor RspR compare
MPMX20_04518 -1.4 -4.3 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_04427 -1.4 -1.0 5S ribosomal RNA compare
MPMX20_03174 -1.4 -4.4 FAD:protein FMN transferase compare
MPMX20_02769 -1.4 -1.7 putative transcriptional regulatory protein YebC compare
MPMX20_03163 -1.4 -1.4 hypothetical protein compare
MPMX20_00801 -1.4 -1.3 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX20_00843 -1.4 -3.0 hypothetical protein compare
MPMX20_00899 -1.4 -0.9 Ribonuclease HI compare
MPMX20_01869 -1.4 -4.9 Succinylglutamate desuccinylase compare
MPMX20_00773 -1.4 -5.2 Catabolite repressor/activator compare
MPMX20_01022 -1.4 -6.7 Cytochrome bo(3) ubiquinol oxidase subunit 1 compare
MPMX20_03308 -1.4 -4.0 Cysteine synthase A compare
MPMX20_03046 -1.4 -6.6 hypothetical protein compare
MPMX20_04375 -1.4 -1.4 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_01019 -1.4 -4.2 Protoheme IX farnesyltransferase compare
MPMX20_00812 -1.4 -3.7 Aconitate hydratase B compare
MPMX20_01901 -1.4 -0.9 Integration host factor subunit alpha compare
MPMX20_03685 -1.4 -1.8 RecBCD enzyme subunit RecC compare
MPMX20_01381 -1.4 -2.8 Phospho-2-dehydro-3-deoxyheptonate aldolase, Phe-sensitive compare
MPMX20_01023 -1.4 -8.8 Cytochrome bo(3) ubiquinol oxidase subunit 2 compare
MPMX20_02929 -1.4 -2.0 hypothetical protein compare
MPMX20_04137 -1.4 -2.8 Inner membrane protein YhcB compare
MPMX20_04552 -1.4 -3.4 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_03488 -1.3 -2.1 Persistence and stress-resistance antitoxin PasI compare
MPMX20_01135 -1.3 -5.0 HTH-type transcriptional regulator BetI compare
MPMX20_01029 -1.3 -0.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_04642 -1.3 -0.9 Phosphate import ATP-binding protein PstB compare
MPMX20_04276 -1.3 -3.4 DNA adenine methylase compare
MPMX20_01097 -1.3 -4.0 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_02884 -1.3 -5.9 hypothetical protein compare
MPMX20_04467 -1.3 -4.8 Diaminopimelate epimerase compare
MPMX20_04595 -1.3 -0.9 Glutamine synthetase compare
MPMX20_00133 -1.3 -3.9 Mannitol operon repressor compare
MPMX20_04463 -1.3 -3.1 DNA helicase II compare
MPMX20_02142 -1.3 -5.0 1,2-phenylacetyl-CoA epoxidase, subunit A compare
MPMX20_02891 -1.3 -6.9 hypothetical protein compare
MPMX20_00807 -1.3 -1.5 Pyruvate dehydrogenase E1 component compare
MPMX20_02897 -1.3 -3.5 hypothetical protein compare
MPMX20_01386 -1.3 -4.0 UDP-glucose 4-epimerase compare
MPMX20_01356 -1.3 -4.8 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_02472 -1.3 -2.8 Phage shock protein A compare
MPMX20_04189 -1.3 -3.1 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_04104 -1.2 -2.5 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC compare
MPMX20_04009 -1.2 -2.2 hypothetical protein compare
MPMX20_00838 -1.2 -4.5 Iron(3+)-hydroxamate-binding protein FhuD compare
MPMX20_02635 -1.2 -1.6 Release factor glutamine methyltransferase compare
MPMX20_03094 -1.2 -2.4 HTH-type transcriptional regulator MlrA compare
MPMX20_01750 -1.2 -4.3 Negative regulator of flagellin synthesis compare
MPMX20_04491 -1.2 -3.0 Thioredoxin 1 compare
MPMX20_04153 -1.2 -3.6 Ribonuclease G compare
MPMX20_03211 -1.2 -2.6 NADH-quinone oxidoreductase subunit I compare
MPMX20_02471 -1.2 -2.3 Phage shock protein B compare
MPMX20_00775 -1.2 -2.3 Ribosomal RNA small subunit methyltransferase H compare
MPMX20_03338 -1.2 -2.2 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_01021 -1.2 -1.9 Cytochrome bo(3) ubiquinol oxidase subunit 3 compare
MPMX20_03248 -1.2 -2.9 Colicin V production protein compare
MPMX20_04601 -1.2 -1.5 DNA polymerase I compare
MPMX20_04687 -1.2 -4.2 hypothetical protein compare
MPMX20_04003 -1.2 -2.6 Putative L-lactate dehydrogenase operon regulatory protein compare
MPMX20_00514 -1.2 -3.6 Fructose-1,6-bisphosphatase class 1 compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in mixed community experiments

For mixed community Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct across organisms