Experiment set7S359 for Enterobacter sp. TBS_079

Compare to:

TSB plate, Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

200 most important genes:

  gene name fitness t score description  
MPMX20_04374 -4.8 -3.3 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_00105 -4.6 -11.9 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_03020 -4.0 -7.1 hypothetical protein compare
MPMX20_00108 -3.9 -19.3 hypothetical protein compare
MPMX20_03017 -3.8 -11.1 hypothetical protein compare
MPMX20_00109 -3.7 -13.8 hypothetical protein compare
MPMX20_04489 -3.7 -10.7 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_00110 -3.6 -11.5 hypothetical protein compare
MPMX20_02591 -3.5 -3.4 DNA-binding protein H-NS compare
MPMX20_03019 -3.5 -8.1 hypothetical protein compare
MPMX20_03016 -3.4 -20.4 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_03015 -3.4 -20.5 Phosphoglucosamine mutase compare
MPMX20_02020 -3.2 -11.0 Mannose-6-phosphate isomerase compare
MPMX20_04730 -3.2 -5.8 hypothetical protein compare
MPMX20_04427 -3.2 -1.2 5S ribosomal RNA compare
MPMX20_03986 -3.2 -3.1 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_04530 -3.2 -11.6 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_00453 -2.7 -1.9 RNA-binding protein Hfq compare
MPMX20_03260 -2.7 -1.9 hypothetical protein compare
MPMX20_00030 -2.6 -1.6 hypothetical protein compare
MPMX20_04377 -2.6 -8.3 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_00998 -2.6 -2.5 Sec translocon accessory complex subunit YajC compare
MPMX20_03021 -2.6 -4.3 hypothetical protein compare
MPMX20_03018 -2.6 -3.1 hypothetical protein compare
MPMX20_01972 -2.6 -0.9 tRNA-Val compare
MPMX20_04467 -2.5 -2.5 Diaminopimelate epimerase compare
MPMX20_02881 -2.5 -1.9 hypothetical protein compare
MPMX20_04375 -2.5 -5.6 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_01334 -2.4 -6.9 Phosphoglucomutase compare
MPMX20_04768 -2.4 -1.6 hypothetical protein compare
MPMX20_01354 -2.4 -1.6 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_01357 -2.3 -3.2 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_00136 -2.2 -0.8 hypothetical protein compare
MPMX20_03636 -2.1 -2.8 Adenylyl-sulfate kinase compare
MPMX20_04444 -2.1 -1.1 Sec-independent protein translocase protein TatA compare
MPMX20_04058 -2.1 -2.0 hypothetical protein compare
MPMX20_01950 -2.1 -2.0 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_01919 -2.1 -1.4 putative protein YdiE compare
MPMX20_02919 -2.1 -5.9 hypothetical protein compare
MPMX20_03075 -2.0 -4.6 HTH-type transcriptional repressor NagR compare
MPMX20_04231 -2.0 -1.2 Bacterioferritin-associated ferredoxin compare
MPMX20_00258 -1.9 -2.6 Diacylglycerol kinase compare
MPMX20_03338 -1.9 -1.3 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_01355 -1.9 -0.7 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_03479 -1.9 -1.5 30S ribosomal protein S16 compare
MPMX20_02471 -1.8 -2.8 Phage shock protein B compare
MPMX20_01286 -1.8 -1.1 Sec-independent protein translocase protein TatE compare
MPMX20_01073 -1.8 -1.7 Nucleoid-associated protein YbaB compare
MPMX20_01989 -1.7 -1.5 hypothetical protein compare
MPMX20_02882 -1.7 -6.1 hypothetical protein compare
MPMX20_03153 -1.7 -1.0 hypothetical protein compare
MPMX20_03376 -1.7 -3.8 HTH-type transcriptional regulator MurR compare
MPMX20_04259 -1.7 -2.6 Protein YhfA compare
MPMX20_01665 -1.7 -1.9 hypothetical protein compare
MPMX20_02376 -1.7 -3.7 Formate dehydrogenase, nitrate-inducible, cytochrome b556(Fdn) subunit compare
MPMX20_00106 -1.7 -1.2 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_00764 -1.7 -1.0 hypothetical protein compare
MPMX20_04443 -1.6 -1.6 Sec-independent protein translocase protein TatB compare
MPMX20_03210 -1.6 -1.9 NADH-quinone oxidoreductase subunit J compare
MPMX20_02355 -1.6 -1.9 D-alanyl-D-alanine dipeptidase compare
MPMX20_04111 -1.6 -3.1 RNase adapter protein RapZ compare
MPMX20_03215 -1.6 -1.5 NADH-quinone oxidoreductase subunit E compare
MPMX20_04504 -1.6 -1.8 hypothetical protein compare
MPMX20_00831 -1.6 -1.9 RNA polymerase-binding transcription factor DksA compare
MPMX20_03267 -1.6 -1.8 Phosphohistidine phosphatase SixA compare
MPMX20_02860 -1.6 -4.0 hypothetical protein compare
MPMX20_00747 -1.6 -2.4 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_02901 -1.6 -6.5 hypothetical protein compare
MPMX20_02707 -1.6 -1.6 Septum site-determining protein MinC compare
MPMX20_02393 -1.5 -0.8 hypothetical protein compare
MPMX20_04731 -1.5 -3.1 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_04483 -1.5 -1.1 Lipid III flippase compare
MPMX20_04442 -1.5 -1.8 Sec-independent protein translocase protein TatC compare
MPMX20_01493 -1.5 -2.7 Ribosomal protein S6--L-glutamate ligase compare
MPMX20_02879 -1.5 -2.8 hypothetical protein compare
MPMX20_04626 -1.5 -1.1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_03785 -1.5 -2.7 L-aspartate dehydrogenase compare
MPMX20_00775 -1.5 -1.5 Ribosomal RNA small subunit methyltransferase H compare
MPMX20_04552 -1.5 -1.5 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_00728 -1.5 -0.8 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_00316 -1.5 -3.5 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL compare
MPMX20_02010 -1.5 -3.2 Ion-translocating oxidoreductase complex subunit B compare
MPMX20_02884 -1.5 -7.2 hypothetical protein compare
MPMX20_00838 -1.5 -3.0 Iron(3+)-hydroxamate-binding protein FhuD compare
MPMX20_01356 -1.5 -3.8 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_03490 -1.5 -2.8 SsrA-binding protein compare
MPMX20_03218 -1.5 -1.4 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_00262 -1.4 -2.0 Zinc uptake regulation protein compare
MPMX20_03047 -1.4 -1.4 dCTP deaminase compare
MPMX20_01156 -1.4 -2.5 hypothetical protein compare
MPMX20_02885 -1.4 -4.4 hypothetical protein compare
MPMX20_00661 -1.4 -2.4 hypothetical protein compare
MPMX20_02704 -1.4 -1.3 hypothetical protein compare
MPMX20_03385 -1.4 -2.4 hypothetical protein compare
MPMX20_02295 -1.4 -1.0 hypothetical protein compare
MPMX20_00032 -1.4 -2.1 Acetolactate synthase isozyme 1 small subunit compare
MPMX20_00745 -1.4 -1.0 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_01097 -1.4 -2.3 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_00617 -1.4 -2.6 hypothetical protein compare
MPMX20_00505 -1.4 -3.4 Gamma-glutamylcyclotransferase family protein ytfP compare
MPMX20_04301 -1.4 -0.9 Fe/S biogenesis protein NfuA compare
MPMX20_03010 -1.4 -0.9 UDP-glucose 4-epimerase compare
MPMX20_04272 -1.4 -0.7 hypothetical protein compare
MPMX20_01019 -1.3 -2.8 Protoheme IX farnesyltransferase compare
MPMX20_02883 -1.3 -5.0 hypothetical protein compare
MPMX20_02863 -1.3 -8.2 hypothetical protein compare
MPMX20_02672 -1.3 -4.8 hypothetical protein compare
MPMX20_03240 -1.3 -2.0 hypothetical protein compare
MPMX20_04573 -1.3 -2.0 hypothetical protein compare
MPMX20_03301 -1.3 -1.2 hypothetical protein compare
MPMX20_02916 -1.3 -3.2 hypothetical protein compare
MPMX20_03773 -1.3 -2.0 HTH-type transcriptional regulator ArgP compare
MPMX20_01363 -1.3 -2.8 Cytochrome bd-I ubiquinol oxidase subunit X compare
MPMX20_02929 -1.3 -0.8 hypothetical protein compare
MPMX20_01352 -1.3 -3.1 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_02868 -1.3 -5.3 Protein UmuD compare
MPMX20_00722 -1.3 -3.1 Na(+)/H(+) antiporter NhaA compare
MPMX20_01765 -1.3 -1.8 Ribonuclease E compare
MPMX20_01348 -1.3 -3.8 Endonuclease 8 compare
MPMX20_04038 -1.3 -2.4 Glucitol operon repressor compare
MPMX20_02007 -1.3 -1.2 Ion-translocating oxidoreductase complex subunit G compare
MPMX20_03211 -1.3 -1.7 NADH-quinone oxidoreductase subunit I compare
MPMX20_04557 -1.3 -5.0 Sensor histidine kinase CpxA compare
MPMX20_02633 -1.3 -2.5 hypothetical protein compare
MPMX20_02871 -1.3 -3.5 hypothetical protein compare
MPMX20_02663 -1.3 -2.8 hypothetical protein compare
MPMX20_01793 -1.3 -2.0 Multiple stress resistance protein BhsA compare
MPMX20_02731 -1.3 -2.1 hypothetical protein compare
MPMX20_00086 -1.3 -1.9 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_02861 -1.3 -4.5 hypothetical protein compare
MPMX20_00428 -1.2 -1.4 hypothetical protein compare
MPMX20_01022 -1.2 -4.2 Cytochrome bo(3) ubiquinol oxidase subunit 1 compare
MPMX20_04279 -1.2 -1.9 Shikimate kinase 1 compare
MPMX20_01740 -1.2 -2.1 DNA damage-inducible protein I compare
MPMX20_00102 -1.2 -0.9 hypothetical protein compare
MPMX20_03771 -1.2 -4.7 D-3-phosphoglycerate dehydrogenase compare
MPMX20_02876 -1.2 -4.3 hypothetical protein compare
MPMX20_00241 -1.2 -3.7 Glucose-6-phosphate isomerase compare
MPMX20_03408 -1.2 -0.8 Co-chaperone protein HscB compare
MPMX20_03091 -1.2 -2.5 hypothetical protein compare
MPMX20_00712 -1.2 -4.0 Threonine synthase compare
MPMX20_03208 -1.2 -2.1 NADH-quinone oxidoreductase subunit L compare
MPMX20_02634 -1.2 -2.2 Protein YchQ compare
MPMX20_03919 -1.2 -3.1 hypothetical protein compare
MPMX20_02907 -1.2 -4.0 hypothetical protein compare
MPMX20_00811 -1.2 -2.7 hypothetical protein compare
MPMX20_00317 -1.2 -2.6 Putative phosphonates utilization ATP-binding protein PhnK compare
MPMX20_03085 -1.2 -2.2 Low molecular weight protein-tyrosine-phosphatase Etp compare
MPMX20_04688 -1.2 -6.1 hypothetical protein compare
MPMX20_04457 -1.2 -2.6 Threonine efflux protein compare
MPMX20_03447 -1.1 -2.6 ATP-dependent RNA helicase SrmB compare
MPMX20_01805 -1.1 -3.5 Inner membrane ABC transporter permease protein YdcV compare
MPMX20_01333 -1.1 -2.0 Negative modulator of initiation of replication compare
MPMX20_04053 -1.1 -2.0 DnaA initiator-associating protein DiaA compare
MPMX20_04153 -1.1 -1.7 Ribonuclease G compare
MPMX20_04109 -1.1 -2.0 Ribosome hibernation promoting factor compare
MPMX20_00340 -1.1 -1.2 hypothetical protein compare
MPMX20_03207 -1.1 -1.9 NADH-quinone oxidoreductase subunit M compare
MPMX20_04243 -1.1 -0.6 hypothetical protein compare
MPMX20_01478 -1.1 -2.8 Deoxyribose operon repressor compare
MPMX20_04639 -1.1 -0.7 Phosphate-binding protein PstS compare
MPMX20_02906 -1.1 -3.7 hypothetical protein compare
MPMX20_00107 -1.1 -2.2 Lipopolysaccharide core heptosyltransferase RfaQ compare
MPMX20_01566 -1.1 -4.4 Phosphoserine aminotransferase compare
MPMX20_02766 -1.1 -1.1 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_02925 -1.1 -6.6 hypothetical protein compare
MPMX20_00494 -1.1 -0.9 hypothetical protein compare
MPMX20_02892 -1.1 -3.5 hypothetical protein compare
MPMX20_02786 -1.1 -2.8 Chemotaxis protein CheY compare
MPMX20_03022 -1.1 -0.8 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_03244 -1.1 -3.4 Histidine-binding periplasmic protein compare
MPMX20_01801 -1.1 -2.4 NAD-dependent protein deacylase compare
MPMX20_02902 -1.1 -3.8 Serine/threonine-protein phosphatase 1 compare
MPMX20_03902 -1.1 -0.8 Urease accessory protein UreE compare
MPMX20_04625 -1.1 -1.5 Protein MioC compare
MPMX20_04440 -1.1 -0.7 Transcription antitermination protein RfaH compare
MPMX20_02455 -1.1 -3.4 hypothetical protein compare
MPMX20_03851 -1.1 -3.3 Biopolymer transport protein ExbB compare
MPMX20_00480 -1.1 -1.3 50S ribosomal protein L9 compare
MPMX20_02890 -1.1 -5.2 hypothetical protein compare
MPMX20_03433 -1.1 -1.4 Ferredoxin YfhL compare
MPMX20_04299 -1.1 -2.2 Pimeloyl-[acyl-carrier protein] methyl ester esterase compare
MPMX20_04011 -1.1 -3.4 Glutathionyl-hydroquinone reductase YqjG compare
MPMX20_02203 -1.1 -1.0 hypothetical protein compare
MPMX20_00459 -1.1 -2.8 HTH-type transcriptional repressor NsrR compare
MPMX20_02997 -1.1 -2.5 Exodeoxyribonuclease I compare
MPMX20_04650 -1.1 -0.7 tRNA modification GTPase MnmE compare
MPMX20_03498 -1.1 -1.0 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_04687 -1.1 -3.6 hypothetical protein compare
MPMX20_02190 -1.1 -3.3 Catechol O-methyltransferase compare
MPMX20_01975 -1.1 -5.2 Cyclopropane-fatty-acyl-phospholipid synthase compare
MPMX20_03214 -1.1 -2.2 NADH-quinone oxidoreductase subunit F compare
MPMX20_02894 -1.1 -2.1 hypothetical protein compare
MPMX20_04324 -1.0 -2.4 putative protein YhhA compare
MPMX20_02218 -1.0 -3.1 hypothetical protein compare
MPMX20_02917 -1.0 -2.2 hypothetical protein compare
MPMX20_00455 -1.0 -3.9 Modulator of FtsH protease HflK compare
MPMX20_03272 -1.0 -2.5 Intermembrane phospholipid transport system lipoprotein MlaA compare
MPMX20_00792 -1.0 -2.3 8-oxo-dGTP diphosphatase compare
MPMX20_02775 -1.0 -2.7 Carboxy-S-adenosyl-L-methionine synthase compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in mixed community experiments

For mixed community Mixed culture; Streptomyces ossamyceticus SAI_001 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct across organisms