Experiment set7S341 for Enterobacter sp. TBS_079

Compare to:

1X LB plate, Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

200 most important genes:

  gene name fitness t score description  
MPMX20_02591 -5.4 -3.7 DNA-binding protein H-NS compare
MPMX20_03986 -4.9 -4.8 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_03154 -4.9 -5.8 Inner membrane protein YejM compare
MPMX20_03020 -4.5 -14.2 hypothetical protein compare
MPMX20_03018 -4.5 -4.4 hypothetical protein compare
MPMX20_00105 -4.5 -20.6 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_04489 -4.4 -22.2 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_03019 -4.2 -20.4 hypothetical protein compare
MPMX20_00110 -4.2 -23.1 hypothetical protein compare
MPMX20_00109 -4.2 -27.1 hypothetical protein compare
MPMX20_02737 -4.1 -22.8 Tail-specific protease compare
MPMX20_03021 -4.0 -9.9 hypothetical protein compare
MPMX20_00108 -3.9 -28.2 hypothetical protein compare
MPMX20_04768 -3.8 -4.6 hypothetical protein compare
MPMX20_02657 -3.8 -10.9 hypothetical protein compare
MPMX20_01950 -3.8 -3.7 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_03017 -3.7 -17.3 hypothetical protein compare
MPMX20_01368 -3.7 -2.5 hypothetical protein compare
MPMX20_01357 -3.6 -6.0 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_04111 -3.6 -5.8 RNase adapter protein RapZ compare
MPMX20_03390 -3.5 -8.6 Outer membrane protein assembly factor BamB compare
MPMX20_03015 -3.4 -25.9 Phosphoglucosamine mutase compare
MPMX20_04530 -3.4 -12.8 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_04443 -3.3 -3.2 Sec-independent protein translocase protein TatB compare
MPMX20_02997 -3.3 -4.5 Exodeoxyribonuclease I compare
MPMX20_01334 -3.3 -13.1 Phosphoglucomutase compare
MPMX20_02672 -3.3 -6.3 hypothetical protein compare
MPMX20_04374 -3.3 -5.9 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_03153 -3.3 -1.7 hypothetical protein compare
MPMX20_03016 -3.2 -22.6 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_04375 -3.2 -11.5 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_01370 -3.2 -2.2 Peptidoglycan-associated lipoprotein compare
MPMX20_00453 -3.2 -3.2 RNA-binding protein Hfq compare
MPMX20_04442 -3.1 -3.7 Sec-independent protein translocase protein TatC compare
MPMX20_00831 -3.1 -4.7 RNA polymerase-binding transcription factor DksA compare
MPMX20_04730 -3.1 -5.9 hypothetical protein compare
MPMX20_00106 -3.0 -3.0 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_04444 -3.0 -1.4 Sec-independent protein translocase protein TatA compare
MPMX20_04483 -3.0 -2.1 Lipid III flippase compare
MPMX20_02767 -3.0 -2.9 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_04279 -2.9 -4.6 Shikimate kinase 1 compare
MPMX20_01367 -2.9 -2.0 Tol-Pal system protein TolR compare
MPMX20_03218 -2.9 -3.9 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_03209 -2.9 -2.0 NADH-quinone oxidoreductase subunit K compare
MPMX20_01065 -2.9 -7.7 Multidrug efflux pump subunit AcrA compare
MPMX20_03010 -2.8 -2.0 UDP-glucose 4-epimerase compare
MPMX20_02696 -2.8 -6.7 Murein tetrapeptide carboxypeptidase compare
MPMX20_01366 -2.7 -1.9 Tol-Pal system protein TolQ compare
MPMX20_03217 -2.7 -2.6 NADH-quinone oxidoreductase subunit B compare
MPMX20_03215 -2.7 -3.6 NADH-quinone oxidoreductase subunit E compare
MPMX20_04626 -2.6 -3.1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_00102 -2.6 -1.8 hypothetical protein compare
MPMX20_01352 -2.6 -7.5 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_03756 -2.6 -4.4 FAD assembly factor SdhE compare
MPMX20_01354 -2.6 -3.4 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_03022 -2.6 -1.8 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_00749 -2.5 -5.3 Chaperone SurA compare
MPMX20_04352 -2.5 -5.8 hypothetical protein compare
MPMX20_03882 -2.5 -8.7 Outer membrane protein TolC compare
MPMX20_01607 -2.5 -5.5 Outer membrane protein A compare
MPMX20_01286 -2.5 -1.6 Sec-independent protein translocase protein TatE compare
MPMX20_03490 -2.5 -5.7 SsrA-binding protein compare
MPMX20_04440 -2.5 -1.5 Transcription antitermination protein RfaH compare
MPMX20_04650 -2.5 -1.7 tRNA modification GTPase MnmE compare
MPMX20_01353 -2.4 -6.2 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_01064 -2.3 -13.1 Multidrug efflux pump subunit AcrB compare
MPMX20_03408 -2.3 -2.2 Co-chaperone protein HscB compare
MPMX20_02020 -2.3 -8.4 Mannose-6-phosphate isomerase compare
MPMX20_02885 -2.3 -8.4 hypothetical protein compare
MPMX20_03208 -2.3 -6.4 NADH-quinone oxidoreductase subunit L compare
MPMX20_03396 -2.3 -6.2 Nucleoside diphosphate kinase compare
MPMX20_04133 -2.3 -6.5 Stringent starvation protein A compare
MPMX20_04377 -2.3 -11.6 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_04140 -2.2 -6.9 Malate dehydrogenase compare
MPMX20_00419 -2.2 -10.4 Aspartate ammonia-lyase compare
MPMX20_00998 -2.2 -4.5 Sec translocon accessory complex subunit YajC compare
MPMX20_01356 -2.2 -8.0 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_02766 -2.2 -3.6 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_01369 -2.1 -5.9 Tol-Pal system protein TolB compare
MPMX20_03213 -2.1 -8.5 NADH-quinone oxidoreductase subunit G compare
MPMX20_03753 -2.1 -4.5 Tyrosine recombinase XerD compare
MPMX20_02899 -2.1 -7.8 hypothetical protein compare
MPMX20_03206 -2.1 -7.3 NADH-quinone oxidoreductase subunit N compare
MPMX20_01156 -2.1 -5.3 hypothetical protein compare
MPMX20_04306 -2.1 -4.8 Glycerol-3-phosphate regulon repressor compare
MPMX20_02476 -2.1 -1.4 Putrescine export system permease protein SapC compare
MPMX20_01351 -2.1 -3.2 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_03443 -2.1 -4.7 Anti-sigma-E factor RseA compare
MPMX20_00745 -2.0 -3.3 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_03214 -2.0 -6.6 NADH-quinone oxidoreductase subunit F compare
MPMX20_03267 -2.0 -3.3 Phosphohistidine phosphatase SixA compare
MPMX20_04518 -2.0 -5.2 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_01020 -2.0 -1.2 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
MPMX20_04038 -1.9 -4.8 Glucitol operon repressor compare
MPMX20_02891 -1.9 -10.2 hypothetical protein compare
MPMX20_04465 -1.9 -4.0 Tyrosine recombinase XerC compare
MPMX20_03216 -1.9 -8.4 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_03212 -1.9 -4.6 NADH-quinone oxidoreductase subunit H compare
MPMX20_02769 -1.9 -1.8 putative transcriptional regulatory protein YebC compare
MPMX20_02879 -1.9 -5.3 hypothetical protein compare
MPMX20_03678 -1.8 -1.5 tRNA-Met compare
MPMX20_04463 -1.8 -5.4 DNA helicase II compare
MPMX20_03211 -1.8 -4.1 NADH-quinone oxidoreductase subunit I compare
MPMX20_02890 -1.8 -11.4 hypothetical protein compare
MPMX20_02884 -1.8 -11.5 hypothetical protein compare
MPMX20_02895 -1.8 -7.4 hypothetical protein compare
MPMX20_03210 -1.8 -4.8 NADH-quinone oxidoreductase subunit J compare
MPMX20_00720 -1.8 -0.9 Chaperone protein DnaK compare
MPMX20_04104 -1.7 -4.0 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC compare
MPMX20_01019 -1.7 -5.9 Protoheme IX farnesyltransferase compare
MPMX20_04067 -1.7 -4.5 Lipoprotein NlpI compare
MPMX20_02919 -1.7 -6.5 hypothetical protein compare
MPMX20_01765 -1.7 -4.0 Ribonuclease E compare
MPMX20_00258 -1.7 -4.5 Diacylglycerol kinase compare
MPMX20_04275 -1.7 -2.0 Ribulose-phosphate 3-epimerase compare
MPMX20_00747 -1.7 -5.4 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_03479 -1.7 -1.4 30S ribosomal protein S16 compare
MPMX20_00570 -1.7 -10.8 putative BsuMI modification methylase subunit YdiO compare
MPMX20_01869 -1.7 -7.5 Succinylglutamate desuccinylase compare
MPMX20_02892 -1.7 -8.2 hypothetical protein compare
MPMX20_02876 -1.7 -7.2 hypothetical protein compare
MPMX20_03385 -1.6 -4.5 hypothetical protein compare
MPMX20_01984 -1.6 -1.5 Ribonuclease T compare
MPMX20_00087 -1.6 -2.4 DNA-directed RNA polymerase subunit omega compare
MPMX20_00456 -1.6 -5.5 Modulator of FtsH protease HflC compare
MPMX20_00480 -1.6 -3.8 50S ribosomal protein L9 compare
MPMX20_03344 -1.6 -8.3 Beta-barrel assembly-enhancing protease compare
MPMX20_02006 -1.6 -3.9 Ion-translocating oxidoreductase complex subunit E compare
MPMX20_04003 -1.6 -4.7 Putative L-lactate dehydrogenase operon regulatory protein compare
MPMX20_02886 -1.6 -8.1 hypothetical protein compare
MPMX20_02576 -1.6 -2.8 Protein TonB compare
MPMX20_04276 -1.6 -3.9 DNA adenine methylase compare
MPMX20_01552 -1.6 -1.9 hypothetical protein compare
MPMX20_02869 -1.5 -12.9 hypothetical protein compare
MPMX20_01867 -1.5 -7.0 N-succinylglutamate 5-semialdehyde dehydrogenase compare
MPMX20_02645 -1.5 -3.5 Ribosome-binding ATPase YchF compare
MPMX20_04162 -1.5 -3.1 3-dehydroquinate dehydratase compare
MPMX20_00801 -1.5 -3.2 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX20_04141 -1.5 -5.0 Arginine repressor compare
MPMX20_01021 -1.5 -3.7 Cytochrome bo(3) ubiquinol oxidase subunit 3 compare
MPMX20_04467 -1.5 -6.2 Diaminopimelate epimerase compare
MPMX20_04466 -1.5 -3.8 hypothetical protein compare
MPMX20_03207 -1.5 -4.6 NADH-quinone oxidoreductase subunit M compare
MPMX20_03487 -1.5 -4.8 Outer membrane protein assembly factor BamE compare
MPMX20_00241 -1.5 -7.8 Glucose-6-phosphate isomerase compare
MPMX20_01972 -1.4 -0.9 tRNA-Val compare
MPMX20_00455 -1.4 -7.1 Modulator of FtsH protease HflK compare
MPMX20_02475 -1.4 -3.1 Putrescine export system permease protein SapB compare
MPMX20_04301 -1.4 -2.3 Fe/S biogenesis protein NfuA compare
MPMX20_00134 -1.4 -5.5 Mannitol-1-phosphate 5-dehydrogenase compare
MPMX20_01349 -1.4 -4.5 Citrate synthase compare
MPMX20_02928 -1.4 -2.6 hypothetical protein compare
MPMX20_02872 -1.4 -5.5 hypothetical protein compare
MPMX20_00452 -1.4 -6.2 tRNA dimethylallyltransferase compare
MPMX20_02901 -1.4 -6.8 hypothetical protein compare
MPMX20_01022 -1.4 -7.4 Cytochrome bo(3) ubiquinol oxidase subunit 1 compare
MPMX20_00537 -1.4 -6.2 Trehalose-6-phosphate hydrolase compare
MPMX20_00514 -1.4 -3.5 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_02896 -1.4 -8.6 Lysozyme RrrD compare
MPMX20_02646 -1.4 -1.5 hypothetical protein compare
MPMX20_00773 -1.4 -6.3 Catabolite repressor/activator compare
MPMX20_00133 -1.4 -3.8 Mannitol operon repressor compare
MPMX20_04601 -1.4 -1.8 DNA polymerase I compare
MPMX20_00156 -1.4 -7.1 DNA-binding transcriptional repressor YiaJ compare
MPMX20_03435 -1.4 -2.0 Pyridoxine 5'-phosphate synthase compare
MPMX20_04278 -1.4 -3.4 3-dehydroquinate synthase compare
MPMX20_03447 -1.4 -6.0 ATP-dependent RNA helicase SrmB compare
MPMX20_01073 -1.4 -1.6 Nucleoid-associated protein YbaB compare
MPMX20_03683 -1.3 -1.3 RecBCD enzyme subunit RecB compare
MPMX20_02143 -1.3 -2.4 1,2-phenylacetyl-CoA epoxidase, subunit B compare
MPMX20_02873 -1.3 -5.3 hypothetical protein compare
MPMX20_04137 -1.3 -2.7 Inner membrane protein YhcB compare
MPMX20_01023 -1.3 -9.5 Cytochrome bo(3) ubiquinol oxidase subunit 2 compare
MPMX20_04170 -1.3 -2.7 DNA-binding protein Fis compare
MPMX20_04731 -1.3 -2.4 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_01363 -1.3 -5.3 Cytochrome bd-I ubiquinol oxidase subunit X compare
MPMX20_02875 -1.3 -7.7 hypothetical protein compare
MPMX20_01975 -1.3 -9.4 Cyclopropane-fatty-acyl-phospholipid synthase compare
MPMX20_00722 -1.3 -5.9 Na(+)/H(+) antiporter NhaA compare
MPMX20_01135 -1.3 -3.9 HTH-type transcriptional regulator BetI compare
MPMX20_04119 -1.3 -0.9 DNA polymerase III subunit chi compare
MPMX20_03636 -1.3 -4.4 Adenylyl-sulfate kinase compare
MPMX20_02878 -1.2 -5.8 hypothetical protein compare
MPMX20_04197 -1.2 -3.0 Trk system potassium uptake protein TrkA compare
MPMX20_02920 -1.2 -4.6 hypothetical protein compare
MPMX20_03685 -1.2 -0.8 RecBCD enzyme subunit RecC compare
MPMX20_03046 -1.2 -6.1 hypothetical protein compare
MPMX20_02477 -1.2 -2.9 Peptide transport system ATP-binding protein SapD compare
MPMX20_02918 -1.2 -5.3 hypothetical protein compare
MPMX20_02889 -1.2 -7.5 hypothetical protein compare
MPMX20_00503 -1.2 -7.9 Translocation and assembly module subunit TamA compare
MPMX20_00721 -1.2 -0.8 Chaperone protein DnaJ compare
MPMX20_04079 -1.2 -1.6 Protein-export membrane protein SecG compare
MPMX20_04685 -1.2 -4.9 hypothetical protein compare
MPMX20_03308 -1.2 -4.3 Cysteine synthase A compare
MPMX20_02141 -1.2 -5.3 Bifunctional protein PaaZ compare
MPMX20_03391 -1.2 -2.3 hypothetical protein compare
MPMX20_01865 -1.2 -5.9 Succinylornithine transaminase compare
MPMX20_00673 -1.2 -6.2 Peptide chain release factor RF3 compare
MPMX20_00746 -1.2 -2.9 Protein ApaG compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in mixed community experiments

For mixed community Mixed culture; Bacillus pumilus TBS_099 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct across organisms