Experiment set7S312 for Enterobacter sp. TBS_079

Compare to:

0.1X LB plate, Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

200 most important genes:

  gene name fitness t score description  
MPMX20_03986 -5.8 -4.0 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_02591 -5.5 -5.3 DNA-binding protein H-NS compare
MPMX20_00105 -5.2 -24.4 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_03154 -5.2 -5.0 Inner membrane protein YejM compare
MPMX20_03019 -4.9 -20.4 hypothetical protein compare
MPMX20_03018 -4.8 -3.3 hypothetical protein compare
MPMX20_04489 -4.7 -23.1 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_00110 -4.7 -23.5 hypothetical protein compare
MPMX20_00109 -4.6 -29.4 hypothetical protein compare
MPMX20_03390 -4.5 -7.6 Outer membrane protein assembly factor BamB compare
MPMX20_01334 -4.4 -12.1 Phosphoglucomutase compare
MPMX20_04530 -4.4 -16.8 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_04443 -4.1 -2.8 Sec-independent protein translocase protein TatB compare
MPMX20_04105 -4.0 -2.7 Lipopolysaccharide export system protein LptC compare
MPMX20_03020 -4.0 -13.5 hypothetical protein compare
MPMX20_01950 -3.9 -3.7 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_00108 -3.8 -24.5 hypothetical protein compare
MPMX20_01368 -3.6 -3.5 hypothetical protein compare
MPMX20_01813 -3.6 -15.4 hypothetical protein compare
MPMX20_01354 -3.5 -3.4 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_01286 -3.5 -1.8 Sec-independent protein translocase protein TatE compare
MPMX20_04768 -3.5 -2.4 hypothetical protein compare
MPMX20_03153 -3.4 -1.7 hypothetical protein compare
MPMX20_03021 -3.4 -11.7 hypothetical protein compare
MPMX20_01607 -3.4 -5.7 Outer membrane protein A compare
MPMX20_01370 -3.4 -2.3 Peptidoglycan-associated lipoprotein compare
MPMX20_02997 -3.4 -5.6 Exodeoxyribonuclease I compare
MPMX20_02767 -3.3 -3.2 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_03017 -3.3 -16.1 hypothetical protein compare
MPMX20_03756 -3.3 -4.5 FAD assembly factor SdhE compare
MPMX20_03211 -3.3 -3.9 NADH-quinone oxidoreductase subunit I compare
MPMX20_04140 -3.3 -5.9 Malate dehydrogenase compare
MPMX20_02672 -3.3 -11.3 hypothetical protein compare
MPMX20_00106 -3.3 -2.3 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_01369 -3.2 -3.2 Tol-Pal system protein TolB compare
MPMX20_04483 -3.1 -2.2 Lipid III flippase compare
MPMX20_01367 -3.1 -2.2 Tol-Pal system protein TolR compare
MPMX20_03010 -3.1 -2.1 UDP-glucose 4-epimerase compare
MPMX20_00998 -3.0 -4.5 Sec translocon accessory complex subunit YajC compare
MPMX20_04442 -3.0 -4.1 Sec-independent protein translocase protein TatC compare
MPMX20_00419 -3.0 -11.1 Aspartate ammonia-lyase compare
MPMX20_02696 -3.0 -6.9 Murein tetrapeptide carboxypeptidase compare
MPMX20_00111 -3.0 -15.5 hypothetical protein compare
MPMX20_03218 -3.0 -3.5 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_01355 -3.0 -0.9 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_01366 -2.9 -2.0 Tol-Pal system protein TolQ compare
MPMX20_04730 -2.8 -5.5 hypothetical protein compare
MPMX20_04375 -2.8 -9.2 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_03022 -2.8 -1.9 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_03016 -2.8 -21.5 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_00102 -2.8 -1.9 hypothetical protein compare
MPMX20_03015 -2.8 -20.8 Phosphoglucosamine mutase compare
MPMX20_04374 -2.8 -5.3 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_03207 -2.8 -5.5 NADH-quinone oxidoreductase subunit M compare
MPMX20_01869 -2.8 -9.4 Succinylglutamate desuccinylase compare
MPMX20_01353 -2.7 -6.4 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_01972 -2.7 -1.2 tRNA-Val compare
MPMX20_02737 -2.7 -9.7 Tail-specific protease compare
MPMX20_03396 -2.7 -6.5 Nucleoside diphosphate kinase compare
MPMX20_04440 -2.6 -1.5 Transcription antitermination protein RfaH compare
MPMX20_01350 -2.5 -4.9 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_01352 -2.5 -8.6 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_00258 -2.4 -6.2 Diacylglycerol kinase compare
MPMX20_02766 -2.4 -3.3 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_03210 -2.4 -5.1 NADH-quinone oxidoreductase subunit J compare
MPMX20_01351 -2.4 -3.9 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_00570 -2.4 -14.3 putative BsuMI modification methylase subunit YdiO compare
MPMX20_01357 -2.3 -4.8 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_02885 -2.3 -10.0 hypothetical protein compare
MPMX20_03212 -2.3 -5.0 NADH-quinone oxidoreductase subunit H compare
MPMX20_04626 -2.3 -4.3 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_04275 -2.3 -2.2 Ribulose-phosphate 3-epimerase compare
MPMX20_02919 -2.3 -6.9 hypothetical protein compare
MPMX20_04141 -2.2 -6.0 Arginine repressor compare
MPMX20_01356 -2.2 -9.0 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_02768 -2.2 -2.8 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_04242 -2.2 -2.1 hypothetical protein compare
MPMX20_03046 -2.2 -8.4 hypothetical protein compare
MPMX20_02477 -2.2 -3.5 Peptide transport system ATP-binding protein SapD compare
MPMX20_03206 -2.1 -7.4 NADH-quinone oxidoreductase subunit N compare
MPMX20_03208 -2.1 -6.6 NADH-quinone oxidoreductase subunit L compare
MPMX20_03216 -2.1 -9.0 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_03248 -2.1 -4.4 Colicin V production protein compare
MPMX20_00749 -2.1 -5.5 Chaperone SurA compare
MPMX20_01567 -2.1 -7.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_01570 -2.1 -1.4 Integration host factor subunit beta compare
MPMX20_01868 -2.1 -10.1 N-succinylarginine dihydrolase compare
MPMX20_03490 -2.1 -5.7 SsrA-binding protein compare
MPMX20_00728 -2.0 -1.2 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_03213 -2.0 -8.7 NADH-quinone oxidoreductase subunit G compare
MPMX20_04650 -2.0 -3.3 tRNA modification GTPase MnmE compare
MPMX20_03443 -2.0 -3.5 Anti-sigma-E factor RseA compare
MPMX20_00745 -2.0 -4.1 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_01023 -2.0 -13.2 Cytochrome bo(3) ubiquinol oxidase subunit 2 compare
MPMX20_04306 -2.0 -5.4 Glycerol-3-phosphate regulon repressor compare
MPMX20_01867 -2.0 -7.4 N-succinylglutamate 5-semialdehyde dehydrogenase compare
MPMX20_04133 -1.9 -8.3 Stringent starvation protein A compare
MPMX20_04444 -1.9 -1.4 Sec-independent protein translocase protein TatA compare
MPMX20_01291 -1.9 -9.1 D-alanyl-D-alanine carboxypeptidase DacA compare
MPMX20_04079 -1.9 -2.7 Protein-export membrane protein SecG compare
MPMX20_04465 -1.9 -4.0 Tyrosine recombinase XerC compare
MPMX20_04377 -1.9 -9.0 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_01866 -1.9 -4.3 Arginine N-succinyltransferase compare
MPMX20_04518 -1.9 -5.4 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_00241 -1.9 -7.9 Glucose-6-phosphate isomerase compare
MPMX20_00831 -1.9 -5.6 RNA polymerase-binding transcription factor DksA compare
MPMX20_02879 -1.8 -2.7 hypothetical protein compare
MPMX20_04692 -1.8 -1.6 hypothetical protein compare
MPMX20_01022 -1.8 -9.0 Cytochrome bo(3) ubiquinol oxidase subunit 1 compare
MPMX20_03214 -1.8 -7.1 NADH-quinone oxidoreductase subunit F compare
MPMX20_01586 -1.8 -6.7 Aspartate aminotransferase compare
MPMX20_01505 -1.8 -6.9 Arginine ABC transporter permease protein ArtQ compare
MPMX20_02903 -1.8 -3.8 hypothetical protein compare
MPMX20_03386 -1.8 -0.9 putative protein YfgJ compare
MPMX20_03753 -1.8 -4.7 Tyrosine recombinase XerD compare
MPMX20_02881 -1.8 -2.6 hypothetical protein compare
MPMX20_00441 -1.8 -0.9 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_04731 -1.8 -4.5 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_02295 -1.8 -2.0 hypothetical protein compare
MPMX20_03424 -1.7 -6.0 Quorum-sensing regulator protein G compare
MPMX20_02920 -1.7 -7.9 hypothetical protein compare
MPMX20_00514 -1.7 -3.6 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_02227 -1.7 -8.1 hypothetical protein compare
MPMX20_01073 -1.7 -2.7 Nucleoid-associated protein YbaB compare
MPMX20_02020 -1.7 -7.9 Mannose-6-phosphate isomerase compare
MPMX20_03408 -1.7 -2.5 Co-chaperone protein HscB compare
MPMX20_00456 -1.7 -6.7 Modulator of FtsH protease HflC compare
MPMX20_02147 -1.7 -4.9 2,3-dehydroadipyl-CoA hydratase compare
MPMX20_01765 -1.7 -3.7 Ribonuclease E compare
MPMX20_03267 -1.7 -3.0 Phosphohistidine phosphatase SixA compare
MPMX20_01101 -1.7 -2.4 Peptidyl-prolyl cis-trans isomerase B compare
MPMX20_03215 -1.7 -2.5 NADH-quinone oxidoreductase subunit E compare
MPMX20_00197 -1.7 -1.5 tRNA-Tyr compare
MPMX20_04110 -1.7 -4.5 Nitrogen regulatory protein compare
MPMX20_04532 -1.7 -1.7 Met repressor compare
MPMX20_03385 -1.6 -6.6 hypothetical protein compare
MPMX20_03641 -1.6 -6.5 Phosphoadenosine phosphosulfate reductase compare
MPMX20_02893 -1.6 -5.4 hypothetical protein compare
MPMX20_02098 -1.6 -6.8 HTH-type transcriptional repressor RspR compare
MPMX20_02891 -1.6 -10.4 hypothetical protein compare
MPMX20_01587 -1.6 -8.4 Outer membrane porin F compare
MPMX20_03440 -1.6 -3.6 Elongation factor 4 compare
MPMX20_03683 -1.6 -1.1 RecBCD enzyme subunit RecB compare
MPMX20_04197 -1.6 -3.3 Trk system potassium uptake protein TrkA compare
MPMX20_02886 -1.6 -8.2 hypothetical protein compare
MPMX20_02926 -1.6 -3.9 hypothetical protein compare
MPMX20_02869 -1.6 -13.5 hypothetical protein compare
MPMX20_04467 -1.6 -5.2 Diaminopimelate epimerase compare
MPMX20_03409 -1.6 -1.8 Iron-binding protein IscA compare
MPMX20_02876 -1.6 -6.0 hypothetical protein compare
MPMX20_04279 -1.6 -3.2 Shikimate kinase 1 compare
MPMX20_01552 -1.6 -2.9 hypothetical protein compare
MPMX20_02896 -1.5 -6.9 Lysozyme RrrD compare
MPMX20_03629 -1.5 -3.8 Protein-L-isoaspartate O-methyltransferase compare
MPMX20_02884 -1.5 -7.1 hypothetical protein compare
MPMX20_03209 -1.5 -2.1 NADH-quinone oxidoreductase subunit K compare
MPMX20_00107 -1.5 -4.5 Lipopolysaccharide core heptosyltransferase RfaQ compare
MPMX20_02875 -1.5 -8.9 hypothetical protein compare
MPMX20_01952 -1.5 -1.0 hypothetical protein compare
MPMX20_01942 -1.5 -4.9 HTH-type transcriptional repressor BluR compare
MPMX20_04466 -1.5 -3.6 hypothetical protein compare
MPMX20_04640 -1.5 -2.0 Phosphate transport system permease protein PstC compare
MPMX20_04119 -1.5 -1.0 DNA polymerase III subunit chi compare
MPMX20_02149 -1.5 -4.2 3-hydroxyadipyl-CoA dehydrogenase compare
MPMX20_01019 -1.5 -4.0 Protoheme IX farnesyltransferase compare
MPMX20_02874 -1.4 -9.9 hypothetical protein compare
MPMX20_04278 -1.4 -3.6 3-dehydroquinate synthase compare
MPMX20_03310 -1.4 -1.4 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_02882 -1.4 -5.3 hypothetical protein compare
MPMX20_00156 -1.4 -7.6 DNA-binding transcriptional repressor YiaJ compare
MPMX20_01865 -1.4 -4.7 Succinylornithine transaminase compare
MPMX20_04352 -1.4 -4.6 hypothetical protein compare
MPMX20_01021 -1.4 -2.4 Cytochrome bo(3) ubiquinol oxidase subunit 3 compare
MPMX20_01333 -1.4 -4.3 Negative modulator of initiation of replication compare
MPMX20_02895 -1.4 -4.0 hypothetical protein compare
MPMX20_01584 -1.4 -8.0 hypothetical protein compare
MPMX20_01506 -1.4 -7.8 Putative ABC transporter arginine-binding protein 2 compare
MPMX20_00806 -1.4 -4.7 Pyruvate dehydrogenase complex repressor compare
MPMX20_03264 -1.4 -3.4 Chorismate synthase compare
MPMX20_02889 -1.4 -8.6 hypothetical protein compare
MPMX20_02770 -1.4 -3.9 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_01303 -1.4 -3.4 Glutamine transport ATP-binding protein GlnQ compare
MPMX20_02883 -1.3 -7.2 hypothetical protein compare
MPMX20_03678 -1.3 -1.3 tRNA-Met compare
MPMX20_00452 -1.3 -5.9 tRNA dimethylallyltransferase compare
MPMX20_04162 -1.3 -3.4 3-dehydroquinate dehydratase compare
MPMX20_02901 -1.3 -6.2 hypothetical protein compare
MPMX20_02635 -1.3 -1.5 Release factor glutamine methyltransferase compare
MPMX20_02864 -1.3 -4.6 hypothetical protein compare
MPMX20_02918 -1.3 -4.3 hypothetical protein compare
MPMX20_02907 -1.3 -4.5 hypothetical protein compare
MPMX20_02863 -1.3 -9.0 hypothetical protein compare
MPMX20_03047 -1.3 -3.4 dCTP deaminase compare
MPMX20_02902 -1.3 -7.6 Serine/threonine-protein phosphatase 1 compare
MPMX20_02871 -1.3 -5.5 hypothetical protein compare
MPMX20_01926 -1.3 -8.6 hypothetical protein compare
MPMX20_04137 -1.3 -3.6 Inner membrane protein YhcB compare
MPMX20_04276 -1.3 -4.0 DNA adenine methylase compare
MPMX20_04484 -1.3 -4.9 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
MPMX20_00673 -1.3 -6.9 Peptide chain release factor RF3 compare


Specific Phenotypes

For 5 genes in this experiment

For mixed community Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct in Enterobacter sp. TBS_079

For mixed community Mixed culture; Bacillus pumilus TBS_104 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct across organisms