Experiment set7S307 for Enterobacter sp. TBS_079

Compare to:

TSB plate, Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

200 most important genes:

  gene name fitness t score description  
MPMX20_03154 -5.5 -7.6 Inner membrane protein YejM compare
MPMX20_03390 -5.5 -5.4 Outer membrane protein assembly factor BamB compare
MPMX20_02591 -5.5 -7.5 DNA-binding protein H-NS compare
MPMX20_04768 -4.6 -9.8 hypothetical protein compare
MPMX20_03019 -4.5 -27.7 hypothetical protein compare
MPMX20_00110 -4.5 -30.0 hypothetical protein compare
MPMX20_00105 -4.4 -24.1 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_04489 -4.1 -22.0 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_00109 -4.1 -29.1 hypothetical protein compare
MPMX20_03018 -4.0 -9.4 hypothetical protein compare
MPMX20_03020 -4.0 -12.8 hypothetical protein compare
MPMX20_00108 -3.9 -27.1 hypothetical protein compare
MPMX20_04483 -3.8 -2.6 Lipid III flippase compare
MPMX20_03017 -3.8 -19.4 hypothetical protein compare
MPMX20_03021 -3.7 -14.8 hypothetical protein compare
MPMX20_04443 -3.6 -4.3 Sec-independent protein translocase protein TatB compare
MPMX20_00831 -3.6 -6.0 RNA polymerase-binding transcription factor DksA compare
MPMX20_03010 -3.6 -2.5 UDP-glucose 4-epimerase compare
MPMX20_00106 -3.6 -5.5 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_01950 -3.6 -4.9 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_02672 -3.6 -15.9 hypothetical protein compare
MPMX20_04530 -3.5 -13.3 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_01368 -3.5 -4.7 hypothetical protein compare
MPMX20_03015 -3.5 -28.2 Phosphoglucosamine mutase compare
MPMX20_03153 -3.5 -2.1 hypothetical protein compare
MPMX20_00102 -3.4 -2.4 hypothetical protein compare
MPMX20_04639 -3.4 -1.5 Phosphate-binding protein PstS compare
MPMX20_04730 -3.4 -7.0 hypothetical protein compare
MPMX20_03016 -3.4 -25.4 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_01366 -3.4 -3.3 Tol-Pal system protein TolQ compare
MPMX20_03022 -3.3 -2.3 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_04467 -3.3 -9.7 Diaminopimelate epimerase compare
MPMX20_04440 -3.3 -1.7 Transcription antitermination protein RfaH compare
MPMX20_01064 -3.3 -18.8 Multidrug efflux pump subunit AcrB compare
MPMX20_03986 -3.3 -4.4 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_04626 -3.2 -4.9 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_02737 -3.2 -20.9 Tail-specific protease compare
MPMX20_00749 -3.2 -7.0 Chaperone SurA compare
MPMX20_01369 -3.2 -7.8 Tol-Pal system protein TolB compare
MPMX20_01367 -3.2 -5.2 Tol-Pal system protein TolR compare
MPMX20_01354 -3.1 -4.0 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_01334 -3.1 -15.5 Phosphoglucomutase compare
MPMX20_04650 -3.1 -3.6 tRNA modification GTPase MnmE compare
MPMX20_02344 -3.0 -2.0 hypothetical protein compare
MPMX20_03443 -3.0 -6.3 Anti-sigma-E factor RseA compare
MPMX20_04275 -2.9 -2.8 Ribulose-phosphate 3-epimerase compare
MPMX20_04374 -2.9 -5.2 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_04279 -2.9 -5.0 Shikimate kinase 1 compare
MPMX20_01065 -2.9 -10.2 Multidrug efflux pump subunit AcrA compare
MPMX20_02997 -2.9 -10.3 Exodeoxyribonuclease I compare
MPMX20_04375 -2.8 -11.3 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_04442 -2.8 -6.5 Sec-independent protein translocase protein TatC compare
MPMX20_03487 -2.8 -6.7 Outer membrane protein assembly factor BamE compare
MPMX20_02767 -2.7 -5.3 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_02701 -2.7 -1.7 Fatty acid metabolism regulator protein compare
MPMX20_01552 -2.6 -3.9 hypothetical protein compare
MPMX20_04111 -2.6 -7.4 RNase adapter protein RapZ compare
MPMX20_03756 -2.6 -5.4 FAD assembly factor SdhE compare
MPMX20_02766 -2.6 -4.8 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_01972 -2.5 -1.1 tRNA-Val compare
MPMX20_02696 -2.5 -9.5 Murein tetrapeptide carboxypeptidase compare
MPMX20_00480 -2.5 -3.8 50S ribosomal protein L9 compare
MPMX20_04465 -2.4 -5.8 Tyrosine recombinase XerC compare
MPMX20_03882 -2.4 -9.6 Outer membrane protein TolC compare
MPMX20_00453 -2.4 -3.2 RNA-binding protein Hfq compare
MPMX20_00747 -2.4 -6.4 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_02020 -2.3 -12.5 Mannose-6-phosphate isomerase compare
MPMX20_01607 -2.3 -4.7 Outer membrane protein A compare
MPMX20_03490 -2.3 -5.5 SsrA-binding protein compare
MPMX20_01286 -2.3 -1.5 Sec-independent protein translocase protein TatE compare
MPMX20_01353 -2.3 -7.4 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_00722 -2.3 -9.9 Na(+)/H(+) antiporter NhaA compare
MPMX20_04532 -2.3 -2.0 Met repressor compare
MPMX20_01370 -2.2 -3.1 Peptidoglycan-associated lipoprotein compare
MPMX20_00570 -2.2 -14.6 putative BsuMI modification methylase subunit YdiO compare
MPMX20_02477 -2.2 -4.8 Peptide transport system ATP-binding protein SapD compare
MPMX20_03479 -2.1 -2.3 30S ribosomal protein S16 compare
MPMX20_03683 -2.1 -2.5 RecBCD enzyme subunit RecB compare
MPMX20_03206 -2.1 -8.9 NADH-quinone oxidoreductase subunit N compare
MPMX20_04119 -2.0 -1.3 DNA polymerase III subunit chi compare
MPMX20_03338 -2.0 -4.7 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_03047 -2.0 -5.8 dCTP deaminase compare
MPMX20_04444 -2.0 -1.5 Sec-independent protein translocase protein TatA compare
MPMX20_00775 -2.0 -2.9 Ribosomal RNA small subunit methyltransferase H compare
MPMX20_02882 -2.0 -8.7 hypothetical protein compare
MPMX20_03210 -2.0 -6.3 NADH-quinone oxidoreductase subunit J compare
MPMX20_02768 -1.9 -3.3 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_04038 -1.9 -7.7 Glucitol operon repressor compare
MPMX20_02879 -1.9 -5.6 hypothetical protein compare
MPMX20_04170 -1.9 -3.7 DNA-binding protein Fis compare
MPMX20_01156 -1.9 -5.2 hypothetical protein compare
MPMX20_04731 -1.9 -5.3 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_04377 -1.9 -7.7 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_03209 -1.9 -2.5 NADH-quinone oxidoreductase subunit K compare
MPMX20_03216 -1.9 -10.4 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_01361 -1.8 -4.6 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_03213 -1.8 -8.5 NADH-quinone oxidoreductase subunit G compare
MPMX20_03685 -1.8 -2.1 RecBCD enzyme subunit RecC compare
MPMX20_03212 -1.8 -6.1 NADH-quinone oxidoreductase subunit H compare
MPMX20_01357 -1.8 -6.4 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_03207 -1.8 -6.5 NADH-quinone oxidoreductase subunit M compare
MPMX20_03211 -1.8 -4.5 NADH-quinone oxidoreductase subunit I compare
MPMX20_03208 -1.8 -5.4 NADH-quinone oxidoreductase subunit L compare
MPMX20_04133 -1.8 -5.8 Stringent starvation protein A compare
MPMX20_04463 -1.8 -5.7 DNA helicase II compare
MPMX20_02919 -1.8 -5.7 hypothetical protein compare
MPMX20_00241 -1.7 -10.6 Glucose-6-phosphate isomerase compare
MPMX20_01355 -1.7 -0.7 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_03218 -1.7 -3.1 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_02893 -1.7 -4.8 hypothetical protein compare
MPMX20_00801 -1.7 -4.0 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX20_02645 -1.7 -5.5 Ribosome-binding ATPase YchF compare
MPMX20_00452 -1.7 -5.9 tRNA dimethylallyltransferase compare
MPMX20_03095 -1.7 -2.0 hypothetical protein compare
MPMX20_03442 -1.7 -6.1 Sigma-E factor regulatory protein RseB compare
MPMX20_02901 -1.6 -10.0 hypothetical protein compare
MPMX20_02918 -1.6 -3.6 hypothetical protein compare
MPMX20_00812 -1.6 -6.0 Aconitate hydratase B compare
MPMX20_02869 -1.6 -12.5 hypothetical protein compare
MPMX20_02899 -1.6 -4.5 hypothetical protein compare
MPMX20_03440 -1.6 -4.2 Elongation factor 4 compare
MPMX20_00998 -1.6 -2.5 Sec translocon accessory complex subunit YajC compare
MPMX20_03753 -1.6 -5.1 Tyrosine recombinase XerD compare
MPMX20_04242 -1.6 -1.9 hypothetical protein compare
MPMX20_04552 -1.6 -5.0 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_04110 -1.6 -3.6 Nitrogen regulatory protein compare
MPMX20_04197 -1.6 -4.7 Trk system potassium uptake protein TrkA compare
MPMX20_02895 -1.6 -6.1 hypothetical protein compare
MPMX20_03217 -1.5 -3.7 NADH-quinone oxidoreductase subunit B compare
MPMX20_01352 -1.5 -5.9 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_00899 -1.5 -1.1 Ribonuclease HI compare
MPMX20_04276 -1.5 -5.2 DNA adenine methylase compare
MPMX20_00514 -1.5 -5.7 Fructose-1,6-bisphosphatase class 1 compare
MPMX20_02885 -1.5 -2.8 hypothetical protein compare
MPMX20_02930 -1.5 -8.4 hypothetical protein compare
MPMX20_04518 -1.5 -6.5 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_00258 -1.5 -6.1 Diacylglycerol kinase compare
MPMX20_03385 -1.5 -5.4 hypothetical protein compare
MPMX20_01021 -1.5 -2.4 Cytochrome bo(3) ubiquinol oxidase subunit 3 compare
MPMX20_01005 -1.5 -3.8 Transcriptional repressor NrdR compare
MPMX20_01351 -1.5 -3.7 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_04557 -1.5 -5.7 Sensor histidine kinase CpxA compare
MPMX20_01023 -1.5 -10.5 Cytochrome bo(3) ubiquinol oxidase subunit 2 compare
MPMX20_00673 -1.5 -8.8 Peptide chain release factor RF3 compare
MPMX20_01566 -1.5 -7.9 Phosphoserine aminotransferase compare
MPMX20_04141 -1.5 -6.1 Arginine repressor compare
MPMX20_00745 -1.5 -3.8 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_02886 -1.5 -6.8 hypothetical protein compare
MPMX20_03391 -1.4 -2.7 hypothetical protein compare
MPMX20_03214 -1.4 -7.0 NADH-quinone oxidoreductase subunit F compare
MPMX20_02657 -1.4 -12.2 hypothetical protein compare
MPMX20_04140 -1.4 -6.7 Malate dehydrogenase compare
MPMX20_03267 -1.4 -3.0 Phosphohistidine phosphatase SixA compare
MPMX20_02871 -1.4 -7.6 hypothetical protein compare
MPMX20_00740 -1.4 -6.7 Carbamoyl-phosphate synthase large chain compare
MPMX20_04352 -1.4 -6.1 hypothetical protein compare
MPMX20_03850 -1.4 -5.0 Biopolymer transport protein ExbD compare
MPMX20_00693 -1.4 -5.5 Phosphoserine phosphatase compare
MPMX20_02887 -1.4 -3.1 hypothetical protein compare
MPMX20_00184 -1.4 -5.3 Peptidyl-lysine N-acetyltransferase YiaC compare
MPMX20_03382 -1.4 -1.3 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_01765 -1.4 -3.0 Ribonuclease E compare
MPMX20_04484 -1.4 -5.7 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
MPMX20_03215 -1.4 -2.9 NADH-quinone oxidoreductase subunit E compare
MPMX20_01741 -1.4 -4.0 Dihydroorotase compare
MPMX20_02635 -1.4 -1.8 Release factor glutamine methyltransferase compare
MPMX20_02295 -1.3 -1.2 hypothetical protein compare
MPMX20_02892 -1.3 -6.4 hypothetical protein compare
MPMX20_01984 -1.3 -1.5 Ribonuclease T compare
MPMX20_01020 -1.3 -1.1 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
MPMX20_02875 -1.3 -7.0 hypothetical protein compare
MPMX20_01350 -1.3 -2.7 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_02891 -1.3 -6.7 hypothetical protein compare
MPMX20_01135 -1.3 -6.2 HTH-type transcriptional regulator BetI compare
MPMX20_03075 -1.3 -5.0 HTH-type transcriptional repressor NagR compare
MPMX20_02920 -1.3 -4.4 hypothetical protein compare
MPMX20_01356 -1.3 -6.0 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_01349 -1.3 -4.4 Citrate synthase compare
MPMX20_04003 -1.3 -4.3 Putative L-lactate dehydrogenase operon regulatory protein compare
MPMX20_00807 -1.3 -3.1 Pyruvate dehydrogenase E1 component compare
MPMX20_03435 -1.3 -1.9 Pyridoxine 5'-phosphate synthase compare
MPMX20_02883 -1.3 -6.0 hypothetical protein compare
MPMX20_03408 -1.3 -2.1 Co-chaperone protein HscB compare
MPMX20_03498 -1.3 -2.1 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_02475 -1.3 -4.0 Putrescine export system permease protein SapB compare
MPMX20_00441 -1.3 -1.1 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_04642 -1.3 -1.4 Phosphate import ATP-binding protein PstB compare
MPMX20_04137 -1.3 -3.9 Inner membrane protein YhcB compare
MPMX20_02890 -1.3 -4.8 hypothetical protein compare
MPMX20_03447 -1.3 -3.8 ATP-dependent RNA helicase SrmB compare
MPMX20_01975 -1.3 -7.6 Cyclopropane-fatty-acyl-phospholipid synthase compare
MPMX20_02877 -1.2 -4.1 hypothetical protein compare
MPMX20_00107 -1.2 -4.3 Lipopolysaccharide core heptosyltransferase RfaQ compare
MPMX20_04692 -1.2 -1.6 hypothetical protein compare
MPMX20_01549 -1.2 -1.2 ATP-binding/permease protein CydD compare
MPMX20_03773 -1.2 -3.0 HTH-type transcriptional regulator ArgP compare
MPMX20_00739 -1.2 -3.3 Carbamoyl-phosphate synthase small chain compare
MPMX20_03405 -1.2 -1.7 Protein IscX compare
MPMX20_04297 -1.2 -3.1 putative [Fe-S]-dependent transcriptional repressor FeoC compare
MPMX20_02880 -1.2 -8.0 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For mixed community Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct in Enterobacter sp. TBS_079

For mixed community Mixed culture; Bacillus pumilus TBS_103 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct across organisms