Experiment set7S291 for Enterobacter sp. TBS_079

Compare to:

TSB plate, Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct

200 most important genes:

  gene name fitness t score description  
MPMX20_02591 -4.0 -4.7 DNA-binding protein H-NS compare
MPMX20_00105 -3.9 -20.2 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_03020 -3.9 -11.1 hypothetical protein compare
MPMX20_00109 -3.9 -21.1 hypothetical protein compare
MPMX20_04489 -3.8 -18.0 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_00108 -3.8 -23.4 hypothetical protein compare
MPMX20_03019 -3.7 -15.2 hypothetical protein compare
MPMX20_03986 -3.5 -3.8 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_00110 -3.5 -19.2 hypothetical protein compare
MPMX20_03017 -3.4 -16.0 hypothetical protein compare
MPMX20_04374 -3.2 -4.2 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_00453 -3.2 -1.9 RNA-binding protein Hfq compare
MPMX20_03015 -3.2 -24.5 Phosphoglucosamine mutase compare
MPMX20_03016 -3.1 -22.3 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_04530 -3.1 -14.0 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_02020 -3.0 -10.5 Mannose-6-phosphate isomerase compare
MPMX20_03018 -2.8 -5.1 hypothetical protein compare
MPMX20_04375 -2.8 -8.6 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_04768 -2.8 -1.9 hypothetical protein compare
MPMX20_01334 -2.8 -10.2 Phosphoglucomutase compare
MPMX20_03021 -2.7 -7.8 hypothetical protein compare
MPMX20_04443 -2.7 -2.4 Sec-independent protein translocase protein TatB compare
MPMX20_04467 -2.4 -5.4 Diaminopimelate epimerase compare
MPMX20_01354 -2.3 -2.0 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_00747 -2.2 -3.4 Ribosomal RNA small subunit methyltransferase A compare
MPMX20_00831 -2.2 -3.9 RNA polymerase-binding transcription factor DksA compare
MPMX20_04243 -2.2 -0.8 hypothetical protein compare
MPMX20_01950 -2.2 -3.3 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_04377 -2.2 -11.2 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_00998 -2.1 -2.5 Sec translocon accessory complex subunit YajC compare
MPMX20_03267 -2.0 -3.1 Phosphohistidine phosphatase SixA compare
MPMX20_04483 -1.9 -1.3 Lipid III flippase compare
MPMX20_02919 -1.9 -6.8 hypothetical protein compare
MPMX20_00106 -1.8 -2.5 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_04730 -1.8 -1.9 hypothetical protein compare
MPMX20_03211 -1.8 -2.7 NADH-quinone oxidoreductase subunit I compare
MPMX20_04279 -1.8 -3.2 Shikimate kinase 1 compare
MPMX20_02696 -1.8 -7.0 Murein tetrapeptide carboxypeptidase compare
MPMX20_04626 -1.7 -1.7 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_02917 -1.7 -3.6 hypothetical protein compare
MPMX20_02885 -1.7 -4.0 hypothetical protein compare
MPMX20_03153 -1.7 -1.1 hypothetical protein compare
MPMX20_03010 -1.7 -1.2 UDP-glucose 4-epimerase compare
MPMX20_01607 -1.7 -3.4 Outer membrane protein A compare
MPMX20_03390 -1.7 -4.8 Outer membrane protein assembly factor BamB compare
MPMX20_01021 -1.7 -3.0 Cytochrome bo(3) ubiquinol oxidase subunit 3 compare
MPMX20_02879 -1.6 -2.7 hypothetical protein compare
MPMX20_02672 -1.6 -8.0 hypothetical protein compare
MPMX20_03571 -1.6 -1.2 tRNA-Arg compare
MPMX20_03405 -1.6 -1.4 Protein IscX compare
MPMX20_03756 -1.6 -3.0 FAD assembly factor SdhE compare
MPMX20_02920 -1.6 -5.3 hypothetical protein compare
MPMX20_04692 -1.6 -1.3 hypothetical protein compare
MPMX20_00102 -1.5 -1.0 hypothetical protein compare
MPMX20_00693 -1.5 -5.8 Phosphoserine phosphatase compare
MPMX20_04639 -1.5 -0.7 Phosphate-binding protein PstS compare
MPMX20_03376 -1.5 -4.2 HTH-type transcriptional regulator MurR compare
MPMX20_04442 -1.5 -2.9 Sec-independent protein translocase protein TatC compare
MPMX20_03385 -1.4 -3.5 hypothetical protein compare
MPMX20_04133 -1.4 -5.2 Stringent starvation protein A compare
MPMX20_00441 -1.4 -0.7 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_00825 -1.4 -0.8 Aspartate 1-decarboxylase compare
MPMX20_04440 -1.4 -0.7 Transcription antitermination protein RfaH compare
MPMX20_04104 -1.4 -2.5 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC compare
MPMX20_03022 -1.4 -1.0 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_01054 -1.4 -2.4 Transcriptional repressor RcnR compare
MPMX20_02887 -1.4 -3.1 hypothetical protein compare
MPMX20_02102 -1.4 -1.1 hypothetical protein compare
MPMX20_00241 -1.4 -5.8 Glucose-6-phosphate isomerase compare
MPMX20_01975 -1.3 -9.1 Cyclopropane-fatty-acyl-phospholipid synthase compare
MPMX20_00801 -1.3 -2.1 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX20_03208 -1.3 -3.6 NADH-quinone oxidoreductase subunit L compare
MPMX20_04650 -1.3 -1.3 tRNA modification GTPase MnmE compare
MPMX20_03678 -1.3 -0.9 tRNA-Met compare
MPMX20_02768 -1.3 -1.2 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_00728 -1.3 -0.7 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_02896 -1.3 -8.2 Lysozyme RrrD compare
MPMX20_01015 -1.3 -1.2 Protein/nucleic acid deglycase 3 compare
MPMX20_04242 -1.2 -1.7 hypothetical protein compare
MPMX20_02997 -1.2 -4.4 Exodeoxyribonuclease I compare
MPMX20_04731 -1.2 -1.9 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_00258 -1.2 -3.0 Diacylglycerol kinase compare
MPMX20_02884 -1.2 -6.8 hypothetical protein compare
MPMX20_02895 -1.2 -4.3 hypothetical protein compare
MPMX20_01566 -1.2 -6.5 Phosphoserine aminotransferase compare
MPMX20_03154 -1.2 -5.6 Inner membrane protein YejM compare
MPMX20_02882 -1.2 -4.6 hypothetical protein compare
MPMX20_02737 -1.2 -6.6 Tail-specific protease compare
MPMX20_01967 -1.2 -1.4 hypothetical protein compare
MPMX20_04427 -1.2 -0.7 5S ribosomal RNA compare
MPMX20_01333 -1.1 -2.9 Negative modulator of initiation of replication compare
MPMX20_02182 -1.1 -2.4 hypothetical protein compare
MPMX20_03213 -1.1 -4.4 NADH-quinone oxidoreductase subunit G compare
MPMX20_02930 -1.1 -4.8 hypothetical protein compare
MPMX20_03210 -1.1 -2.8 NADH-quinone oxidoreductase subunit J compare
MPMX20_01648 -1.1 -1.3 hypothetical protein compare
MPMX20_03207 -1.1 -2.8 NADH-quinone oxidoreductase subunit M compare
MPMX20_02518 -1.1 -3.0 hypothetical protein compare
MPMX20_01156 -1.1 -2.9 hypothetical protein compare
MPMX20_01022 -1.1 -5.3 Cytochrome bo(3) ubiquinol oxidase subunit 1 compare
MPMX20_02147 -1.1 -3.3 2,3-dehydroadipyl-CoA hydratase compare
MPMX20_01347 -1.1 -3.5 5-oxoprolinase subunit A compare
MPMX20_02871 -1.1 -4.3 hypothetical protein compare
MPMX20_03215 -1.1 -1.7 NADH-quinone oxidoreductase subunit E compare
MPMX20_01135 -1.1 -3.3 HTH-type transcriptional regulator BetI compare
MPMX20_03488 -1.1 -1.9 Persistence and stress-resistance antitoxin PasI compare
MPMX20_00494 -1.1 -1.4 hypothetical protein compare
MPMX20_04194 -1.1 -0.6 Peptide deformylase compare
MPMX20_02477 -1.1 -1.4 Peptide transport system ATP-binding protein SapD compare
MPMX20_02886 -1.1 -4.1 hypothetical protein compare
MPMX20_02892 -1.1 -4.7 hypothetical protein compare
MPMX20_02880 -1.1 -7.0 hypothetical protein compare
MPMX20_00673 -1.1 -4.3 Peptide chain release factor RF3 compare
MPMX20_04275 -1.1 -1.0 Ribulose-phosphate 3-epimerase compare
MPMX20_04162 -1.1 -1.9 3-dehydroquinate dehydratase compare
MPMX20_01351 -1.1 -1.7 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_00775 -1.1 -1.5 Ribosomal RNA small subunit methyltransferase H compare
MPMX20_02874 -1.1 -7.4 hypothetical protein compare
MPMX20_03443 -1.1 -3.2 Anti-sigma-E factor RseA compare
MPMX20_02873 -1.0 -4.1 hypothetical protein compare
MPMX20_00976 -1.0 -2.2 Pyrroline-5-carboxylate reductase compare
MPMX20_00111 -1.0 -5.4 hypothetical protein compare
MPMX20_03338 -1.0 -2.2 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_01378 -1.0 -3.3 Nicotinamide riboside transporter PnuC compare
MPMX20_02906 -1.0 -3.9 hypothetical protein compare
MPMX20_00650 -1.0 -2.5 hypothetical protein compare
MPMX20_01353 -1.0 -2.7 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_01019 -1.0 -2.5 Protoheme IX farnesyltransferase compare
MPMX20_03047 -1.0 -2.3 dCTP deaminase compare
MPMX20_02889 -1.0 -4.9 hypothetical protein compare
MPMX20_00722 -1.0 -4.1 Na(+)/H(+) antiporter NhaA compare
MPMX20_03447 -1.0 -3.2 ATP-dependent RNA helicase SrmB compare
MPMX20_02153 -1.0 -2.9 Transcriptional repressor PaaX compare
MPMX20_04029 -1.0 -1.1 Cyclic dipyrimidine nucleotide synthase compare
MPMX20_01275 -1.0 -1.3 hypothetical protein compare
MPMX20_04308 -1.0 -2.8 Thiosulfate sulfurtransferase GlpE compare
MPMX20_00504 -1.0 -7.4 Translocation and assembly module subunit TamB compare
MPMX20_02872 -1.0 -3.5 hypothetical protein compare
MPMX20_02575 -1.0 -3.8 putative acyl-CoA thioester hydrolase compare
MPMX20_01413 -1.0 -1.2 Molybdopterin synthase sulfur carrier subunit compare
MPMX20_02888 -1.0 -4.2 hypothetical protein compare
MPMX20_01740 -1.0 -2.4 DNA damage-inducible protein I compare
MPMX20_00107 -1.0 -3.1 Lipopolysaccharide core heptosyltransferase RfaQ compare
MPMX20_03216 -1.0 -4.2 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_01765 -1.0 -2.1 Ribonuclease E compare
MPMX20_02009 -1.0 -4.2 Ion-translocating oxidoreductase complex subunit C compare
MPMX20_03851 -1.0 -4.5 Biopolymer transport protein ExbB compare
MPMX20_02928 -1.0 -1.7 hypothetical protein compare
MPMX20_00745 -1.0 -1.9 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_03629 -0.9 -2.3 Protein-L-isoaspartate O-methyltransferase compare
MPMX20_04644 -0.9 -3.8 6-phosphogluconate phosphatase compare
MPMX20_04465 -0.9 -2.0 Tyrosine recombinase XerC compare
MPMX20_02011 -0.9 -4.7 Ion-translocating oxidoreductase complex subunit A compare
MPMX20_03721 -0.9 -2.8 hypothetical protein compare
MPMX20_04301 -0.9 -1.2 Fe/S biogenesis protein NfuA compare
MPMX20_04557 -0.9 -2.0 Sensor histidine kinase CpxA compare
MPMX20_03951 -0.9 -2.2 hypothetical protein compare
MPMX20_03479 -0.9 -0.9 30S ribosomal protein S16 compare
MPMX20_02901 -0.9 -3.8 hypothetical protein compare
MPMX20_03773 -0.9 -1.7 HTH-type transcriptional regulator ArgP compare
MPMX20_03882 -0.9 -3.8 Outer membrane protein TolC compare
MPMX20_00456 -0.9 -4.3 Modulator of FtsH protease HflC compare
MPMX20_03334 -0.9 -0.7 hypothetical protein compare
MPMX20_02890 -0.9 -5.1 hypothetical protein compare
MPMX20_00197 -0.9 -0.6 tRNA-Tyr compare
MPMX20_04067 -0.9 -3.2 Lipoprotein NlpI compare
MPMX20_04278 -0.9 -1.5 3-dehydroquinate synthase compare
MPMX20_03212 -0.9 -2.2 NADH-quinone oxidoreductase subunit H compare
MPMX20_03833 -0.9 -3.8 putative membrane protein YdfK compare
MPMX20_04687 -0.9 -3.2 hypothetical protein compare
MPMX20_02918 -0.9 -2.2 hypothetical protein compare
MPMX20_02143 -0.9 -1.3 1,2-phenylacetyl-CoA epoxidase, subunit B compare
MPMX20_04171 -0.9 -1.5 hypothetical protein compare
MPMX20_01991 -0.9 -3.9 Superoxide dismutase [Cu-Zn] compare
MPMX20_02876 -0.9 -3.3 hypothetical protein compare
MPMX20_04110 -0.9 -2.0 Nitrogen regulatory protein compare
MPMX20_03218 -0.9 -1.6 NAD(P)H-quinone oxidoreductase subunit 3 compare
MPMX20_03206 -0.9 -3.2 NADH-quinone oxidoreductase subunit N compare
MPMX20_01286 -0.9 -0.6 Sec-independent protein translocase protein TatE compare
MPMX20_03076 -0.9 -3.5 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare
MPMX20_02086 -0.8 -2.0 hypothetical protein compare
MPMX20_03163 -0.8 -0.7 hypothetical protein compare
MPMX20_01552 -0.8 -0.8 hypothetical protein compare
MPMX20_00816 -0.8 -2.5 hypothetical protein compare
MPMX20_02476 -0.8 -0.6 Putrescine export system permease protein SapC compare
MPMX20_01023 -0.8 -5.5 Cytochrome bo(3) ubiquinol oxidase subunit 2 compare
MPMX20_03945 -0.8 -1.8 hypothetical protein compare
MPMX20_02630 -0.8 -2.7 Putative cation transport regulator ChaB compare
MPMX20_01663 -0.8 -2.8 hypothetical protein compare
MPMX20_03440 -0.8 -1.4 Elongation factor 4 compare
MPMX20_03605 -0.8 -1.6 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic compare
MPMX20_03408 -0.8 -1.0 Co-chaperone protein HscB compare
MPMX20_00321 -0.8 -3.7 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG compare
MPMX20_02904 -0.8 -3.5 hypothetical protein compare
MPMX20_03260 -0.8 -1.5 hypothetical protein compare
MPMX20_03096 -0.8 -1.8 Glycine betaine uptake system permease protein YehW compare
MPMX20_02891 -0.8 -3.2 hypothetical protein compare
MPMX20_02861 -0.8 -5.3 hypothetical protein compare
MPMX20_04109 -0.8 -2.4 Ribosome hibernation promoting factor compare
MPMX20_03771 -0.8 -3.8 D-3-phosphoglycerate dehydrogenase compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in mixed community experiments

For mixed community Mixed culture; Enterobacter sp. TBS-079 (Tn7_Kan_Lux) 1:1 starting OD to Enterobacter_TBS_079_ML3; Collection-direct across organisms