Experiment set7IT094 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM L-Ornithine

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS08320 +3.2 11.7 molybdopterin molybdotransferase MoeA compare
MMP_RS02885 +3.0 19.5 molybdopterin biosynthesis protein compare
MMP_RS03390 +2.7 10.5 malate dehydrogenase compare
MMP_RS06715 +1.6 10.8 cache domain-containing protein compare
MMP_RS06720 +1.5 7.4 response regulator transcription factor compare
MMP_RS04885 +1.3 7.8 sulfite exporter TauE/SafE family protein compare
MMP_RS03340 +1.3 1.2 ABC transporter ATP-binding protein compare
MMP_RS02290 +1.3 6.3 MBL fold metallo-hydrolase compare
MMP_RS05835 +1.0 1.0 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS05315 +1.0 2.3 hypothetical protein compare
MMP_RS00185 +1.0 6.9 potassium channel protein compare
MMP_RS06870 +1.0 4.1 DedA family protein compare
MMP_RS00325 +0.9 1.8 RNA-binding protein compare
MMP_RS06575 +0.9 3.7 fluoride efflux transporter CrcB compare
MMP_RS05695 +0.9 4.3 phospholipase D-like domain-containing protein compare
MMP_RS01145 +0.8 3.4 ABC transporter ATP-binding protein compare
MMP_RS03065 +0.8 2.3 AzlC family ABC transporter permease compare
MMP_RS07765 +0.8 4.8 sodium:alanine symporter family protein compare
MMP_RS08275 +0.8 3.7 hypothetical protein compare
MMP_RS06590 +0.8 2.3 GNAT family N-acetyltransferase compare
MMP_RS00855 +0.8 3.2 DUF367 family protein compare
MMP_RS05675 +0.7 2.4 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS03220 +0.7 2.4 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS00290 +0.7 3.0 hypothetical protein compare
MMP_RS00665 +0.7 2.8 hypothetical protein compare
MMP_RS06990 +0.7 2.6 CatB-related O-acetyltransferase compare
MMP_RS06540 +0.7 2.1 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS00450 +0.7 0.9 4Fe-4S binding protein compare
MMP_RS06345 +0.7 4.8 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS00660 +0.7 4.8 alkaline phosphatase family protein compare
MMP_RS06685 +0.7 4.8 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS08280 +0.7 2.1 proteasome assembly chaperone family protein compare
MMP_RS08555 +0.7 1.8 hypothetical protein compare
MMP_RS00395 +0.7 1.1 MGMT family protein compare
MMP_RS01135 +0.7 3.7 molybdate ABC transporter substrate-binding protein compare
MMP_RS02745 +0.7 1.7 hypothetical protein compare
MMP_RS00155 +0.7 2.8 heavy metal-binding domain-containing protein compare
MMP_RS01495 +0.6 3.5 TraB/GumN family protein compare
MMP_RS07915 +0.6 2.4 DUF4870 domain-containing protein compare
MMP_RS00295 +0.6 1.0 gamma carbonic anhydrase family protein compare
MMP_RS08285 +0.6 2.2 serine/threonine protein kinase compare
MMP_RS00655 +0.6 2.1 hypothetical protein compare
MMP_RS08310 +0.6 1.4 TMEM165/GDT1 family protein compare
MMP_RS03965 +0.6 1.6 hypothetical protein compare
MMP_RS02895 +0.6 2.9 DHH family phosphoesterase compare
MMP_RS00345 +0.6 2.2 DUF2666 domain-containing protein compare
MMP_RS01415 +0.6 1.6 DUF2067 domain-containing protein compare
MMP_RS01100 +0.6 0.9 ABC transporter ATP-binding protein compare
MMP_RS08670 +0.6 2.4 metallophosphoesterase compare
MMP_RS06910 +0.6 2.7 RlmF-related methyltransferase compare
MMP_RS00375 +0.6 3.1 ammonium transporter compare
MMP_RS01620 +0.6 2.2 hypothetical protein compare
MMP_RS00430 +0.6 1.3 hypothetical protein compare
MMP_RS03465 +0.6 0.8 adenine phosphoribosyltransferase compare
MMP_RS07805 +0.6 2.0 ABC transporter permease compare
MMP_RS08390 +0.6 2.4 DUF5400 domain-containing protein compare
MMP_RS01630 +0.6 3.8 N-glycosylase/DNA lyase compare
MMP_RS06745 +0.6 1.6 DUF2119 domain-containing protein compare
MMP_RS07815 +0.6 0.8 DUF2120 domain-containing protein compare
MMP_RS05975 +0.6 1.0 hypothetical protein compare
MMP_RS06585 +0.6 1.2 DMT family protein compare
MMP_RS02740 +0.6 2.2 hypothetical protein compare
MMP_RS07095 +0.5 1.7 PspC domain-containing protein compare
MMP_RS08160 +0.5 2.0 EamA family transporter compare
MMP_RS06705 +0.5 2.1 formate/nitrite transporter family protein compare
MMP_RS08265 +0.5 1.6 rubrerythrin compare
MMP_RS08640 +0.5 3.1 TIM barrel protein compare
MMP_RS01055 +0.5 2.1 hypothetical protein compare
MMP_RS01095 +0.5 1.7 iron ABC transporter permease compare
MMP_RS07645 +0.5 2.0 aldehyde dehydrogenase family protein compare
MMP_RS06660 +0.5 2.7 glycosyltransferase family 4 protein compare
MMP_RS05090 +0.5 2.7 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS06650 +0.5 2.3 glycoside hydrolase family 57 protein compare
MMP_RS02390 +0.5 2.6 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS06150 +0.5 2.9 hypothetical protein compare
MMP_RS00950 +0.5 1.7 site-2 protease family protein compare
MMP_RS02770 +0.5 1.6 hypothetical protein compare
MMP_RS08085 +0.5 3.3 hypothetical protein compare
MMP_RS08410 +0.5 2.4 DUF169 domain-containing protein compare
MMP_RS01060 +0.5 3.1 calcium/sodium antiporter compare
MMP_RS00990 +0.5 1.5 hypothetical protein compare
MMP_RS03300 +0.5 0.4 TOBE domain-containing protein compare
MMP_RS04145 +0.5 0.9 hypothetical protein compare
MMP_RS05985 +0.5 0.8 hypothetical protein compare
MMP_RS01435 +0.5 1.8 DMT family transporter compare
MMP_RS05720 +0.5 1.6 signal recognition particle subunit SRP19/SEC65 family protein compare
MMP_RS08485 +0.5 2.4 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS02375 +0.5 3.0 hypothetical protein compare
MMP_RS00085 +0.4 2.7 DNA cytosine methyltransferase compare
MMP_RS07195 +0.4 1.8 M20 family metallo-hydrolase compare
MMP_RS08600 +0.4 1.1 flagellar protein D compare
MMP_RS02300 +0.4 2.0 NAD(P)H-dependent oxidoreductase compare
MMP_RS00650 +0.4 2.3 ABC transporter ATP-binding protein compare
MMP_RS08835 +0.4 2.0 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS06710 +0.4 2.4 selenium-binding protein compare
MMP_RS05940 +0.4 2.0 corrinoid protein compare
MMP_RS06760 +0.4 1.3 hypothetical protein compare
MMP_RS02915 +0.4 2.0 amino acid ABC transporter permease compare
MMP_RS08700 +0.4 2.0 hypothetical protein compare
MMP_RS05980 +0.4 2.3 ferritin compare
MMP_RS07625 +0.4 0.8 cobalt ECF transporter T component CbiQ compare
MMP_RS02475 +0.4 0.8 hypothetical protein compare
MMP_RS07890 +0.4 1.1 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS01200 +0.4 1.6 hypothetical protein compare
MMP_RS01130 +0.4 2.5 flavoprotein compare
MMP_RS03150 +0.4 2.7 phosphoglycerate mutase compare
MMP_RS06500 +0.4 2.3 ATP-binding protein compare
MMP_RS06250 +0.4 1.7 hypothetical protein compare
MMP_RS00385 +0.4 2.0 P-II family nitrogen regulator compare
MMP_RS05795 +0.4 0.8 redox-regulated ATPase YchF compare
MMP_RS02705 +0.4 1.8 formylmethanofuran dehydrogenase subunit B compare
MMP_RS01570 +0.4 0.7 hypothetical protein compare
MMP_RS01635 +0.4 2.2 thiamine pyrophosphate-dependent enzyme compare
MMP_RS01030 +0.4 1.2 MTAP family purine nucleoside phosphorylase compare
MMP_RS05830 +0.4 1.2 peptidyl-prolyl cis-trans isomerase compare
MMP_RS08070 +0.4 1.2 DUF2096 domain-containing protein compare
MMP_RS01985 +0.4 1.3 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS03460 +0.4 1.4 U32 family peptidase compare
MMP_RS08400 +0.4 0.8 MJ0307 family thioredoxin compare
MMP_RS00400 +0.4 1.4 tributyrin esterase compare
MMP_RS07650 +0.4 2.7 TldD/PmbA family protein compare
MMP_RS03895 +0.4 1.2 hypothetical protein compare
MMP_RS05780 +0.4 2.1 multidrug resistance efflux transporter family protein compare
MMP_RS08325 +0.4 2.3 hypothetical protein compare
MMP_RS07560 +0.4 1.3 prefoldin subunit alpha compare
MMP_RS02045 +0.4 0.7 tRNA-Met compare
MMP_RS04205 +0.3 1.9 carboxymuconolactone decarboxylase family protein compare
MMP_RS00960 +0.3 1.2 iron export ABC transporter permease subunit FetB compare
MMP_RS00105 +0.3 2.3 hypothetical protein compare
MMP_RS00195 +0.3 3.0 DUF4013 domain-containing protein compare
MMP_RS09065 +0.3 2.2 hypothetical protein compare
MMP_RS00940 +0.3 1.6 daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein compare
MMP_RS07840 +0.3 1.1 ribonuclease III compare
MMP_RS05715 +0.3 1.4 hypothetical protein compare
MMP_RS06570 +0.3 0.9 DUF190 domain-containing protein compare
MMP_RS02490 +0.3 1.1 hypothetical protein compare
MMP_RS01980 +0.3 2.1 trimeric intracellular cation channel family protein compare
MMP_RS04100 +0.3 1.0 hypothetical protein compare
MMP_RS01785 +0.3 1.7 hypothetical protein compare
MMP_RS03800 +0.3 1.5 hypothetical protein compare
MMP_RS07350 +0.3 0.7 preprotein translocase subunit Sec61beta compare
MMP_RS06215 +0.3 0.6 30S ribosomal protein S6e compare
MMP_RS07910 +0.3 1.4 NAD(P)H-hydrate dehydratase compare
MMP_RS01675 +0.3 0.6 hypothetical protein compare
MMP_RS00800 +0.3 2.0 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS04050 +0.3 1.1 hypothetical protein compare
MMP_RS05820 +0.3 1.5 RNA-binding transcriptional accessory protein compare
MMP_RS04060 +0.3 1.4 hypothetical protein compare
MMP_RS05130 +0.3 2.6 DUF2226 domain-containing protein compare
MMP_RS08775 +0.3 1.5 methanogenesis marker 9 domain-containing protein compare
MMP_RS01150 +0.3 1.7 aldo/keto reductase compare
MMP_RS08445 +0.3 0.8 DUF2099 family protein compare
MMP_RS01460 +0.3 0.9 hypothetical protein compare
MMP_RS08430 +0.3 1.6 HAD family hydrolase compare
MMP_RS08260 +0.3 1.5 DUF99 family protein compare
MMP_RS03215 +0.3 1.8 MBL fold metallo-hydrolase compare
MMP_RS04835 +0.3 1.5 chemotaxis protein CheC compare
MMP_RS04840 +0.3 1.7 response regulator compare
MMP_RS07960 +0.3 1.6 sugar phosphate isomerase/epimerase compare
MMP_RS08480 +0.3 1.7 molybdate ABC transporter substrate-binding protein compare
MMP_RS07150 +0.3 1.4 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS04190 +0.3 1.8 hypothetical protein compare
MMP_RS06190 +0.3 1.5 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMP_RS05800 +0.3 1.2 B12-binding domain-containing radical SAM protein compare
MMP_RS04985 +0.3 1.0 DUF2180 family protein compare
MMP_RS01525 +0.3 0.6 nucleoside-diphosphate kinase compare
MMP_RS01640 +0.3 1.8 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMP_RS02170 +0.3 1.4 CBS domain-containing protein compare
MMP_RS07620 +0.3 1.0 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS05970 +0.3 1.1 class II SORL domain-containing protein compare
MMP_RS06065 +0.3 2.3 iron ABC transporter substrate-binding protein compare
MMP_RS01965 +0.3 1.2 DUF1616 domain-containing protein compare
MMP_RS02790 +0.3 0.4 class III signal peptide-containing protein compare
MMP_RS02370 +0.3 0.9 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS05110 +0.3 1.8 16S ribosomal RNA methyltransferase A compare
MMP_RS05990 +0.3 1.5 DsrE family protein compare
MMP_RS09030 +0.3 1.3 hypothetical protein compare
MMP_RS00335 +0.3 1.0 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMP_RS07985 +0.3 1.9 nitroreductase family protein compare
MMP_RS01550 +0.3 0.9 DUF1624 domain-containing protein compare
MMP_RS04635 +0.3 1.7 GNAT family N-acetyltransferase compare
MMP_RS04800 +0.3 1.7 chemotaxis protein CheW compare
MMP_RS04945 +0.3 1.0 hypothetical protein compare
MMP_RS05995 +0.3 1.6 FprA family A-type flavoprotein compare
MMP_RS00565 +0.3 1.2 CBS domain-containing protein compare
MMP_RS08595 +0.3 0.3 flagellar protein C compare
MMP_RS07770 +0.3 0.9 alanine racemase compare
MMP_RS06305 +0.3 1.3 transporter substrate-binding domain-containing protein compare
MMP_RS08250 +0.3 1.2 pyruvate kinase compare
MMP_RS01660 +0.3 0.8 hypothetical protein compare
MMP_RS02815 +0.3 0.6 hypothetical protein compare
MMP_RS01115 +0.3 1.4 molybdopterin molybdotransferase MoeA compare
MMP_RS08075 +0.2 1.1 DUF749 domain-containing protein compare
MMP_RS06545 +0.2 1.0 ferredoxin family protein compare
MMP_RS01210 +0.2 1.1 sodium:solute symporter compare
MMP_RS01680 +0.2 1.6 phenylacetate--CoA ligase compare
MMP_RS06325 +0.2 0.4 hypothetical protein compare
MMP_RS06280 +0.2 1.1 alpha-glucan family phosphorylase compare
MMP_RS00235 +0.2 1.3 HDIG domain-containing protein compare
MMP_RS03490 +0.2 0.5 DUF2115 domain-containing protein compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source L-Ornithine in Methanococcus maripaludis S2

For nitrogen source L-Ornithine across organisms