| | gene | name | fitness | t score | description | |
|---|
| Rru_A3594 | | -7.0 | -6.8 | Histidine biosynthesis protein HisF (NCBI) | compare |
| Rru_A3276 | | -6.4 | -5.3 | Ornithine carbamoyltransferase (NCBI) | compare |
| Rru_A1897 | | -6.2 | -9.5 | Indole-3-glycerol-phosphate synthase (NCBI) | compare |
| Rru_A0394 | | -6.0 | -5.8 | Amino-acid N-acetyltransferase (NCBI) | compare |
| Rru_A2885 | | -5.8 | -21.7 | Carbamoyl-phosphate synthase, small subunit (NCBI) | compare |
| Rru_A3267 | | -5.7 | -11.3 | Methionine biosynthesis MetW (NCBI) | compare |
| Rru_A3428 | | -5.7 | -21.6 | Tryptophan synthase (NCBI) | compare |
| Rru_A1189 | | -5.6 | -17.5 | 3-isopropylmalate dehydratase large subunit region (NCBI) | compare |
| Rru_A3162 | | -5.6 | -20.3 | Prephenate dehydratase (NCBI) | compare |
| Rru_A3751 | | -5.6 | -16.0 | Argininosuccinate synthase (NCBI) | compare |
| Rru_A0468 | | -5.3 | -7.0 | Acetolactate synthase, small subunit (NCBI) | compare |
| Rru_A2772 | | -5.3 | -5.1 | ATP phosphoribosyltransferase (NCBI) | compare |
| Rru_A1105 | | -5.1 | -9.3 | tRNA synthetase, class II (G, H, P and S) (NCBI) | compare |
| Rru_A2886 | | -5.1 | -26.3 | Carbamoyl-phosphate synthase, large subunit, glutamine-dependent (NCBI) | compare |
| Rru_A2421 | | -5.1 | -10.8 | N-acetyl-gamma-glutamyl-phosphate reductase (NCBI) | compare |
| Rru_A1239 | | -5.0 | -8.4 | Glutamate 5-kinase, ProB-related (NCBI) | compare |
| Rru_A0469 | | -5.0 | -17.3 | Ketol-acid reductoisomerase (NCBI) | compare |
| Rru_A0467 | | -5.0 | -17.0 | Acetolactate synthase, large subunit, biosynthetic type (NCBI) | compare |
| Rru_A3425 | | -4.9 | -4.7 | Phosphoribosylanthranilate isomerase (NCBI) | compare |
| Rru_A3266 | | -4.9 | -15.8 | Homoserine O-acetyltransferase (NCBI) | compare |
| Rru_A1530 | | -4.9 | -28.3 | 5,10-methylenetetrahydrofolate reductase (NCBI) | compare |
| Rru_A1191 | | -4.9 | -12.1 | 3-isopropylmalate dehydrogenase (NCBI) | compare |
| Rru_A2549 | | -4.9 | -11.5 | HAD-superfamily hydrolase subfamily IIB (NCBI) | compare |
| Rru_A3277 | | -4.8 | -6.6 | Acetylornithine and succinylornithine aminotransferase (NCBI) | compare |
| Rru_A1928 | | -4.8 | -19.4 | Yeast 2-isopropylmalate synthase (NCBI) | compare |
| Rru_A0432 | | -4.8 | -6.5 | 4-hydroxythreonine-4-phosphate dehydrogenase (NCBI) | compare |
| Rru_A1786 | | -4.7 | -19.5 | Dihydroxy-acid dehydratase (NCBI) | compare |
| Rru_A1896 | | -4.7 | -12.2 | Anthranilate phosphoribosyl transferase (NCBI) | compare |
| Rru_A3191 | | -4.5 | -16.9 | Dihydroorotase multifunctional complex type (NCBI) | compare |
| Rru_A1190 | | -4.4 | -2.7 | 3-isopropylmalate dehydratase small subunit region (NCBI) | compare |
| Rru_A3264 | | -4.4 | -12.1 | Histidinol-phosphate aminotransferase (NCBI) | compare |
| Rru_A3214 | | -4.4 | -17.1 | O-succinylhomoserine sulfhydrylase (NCBI) | compare |
| Rru_A2936 | | -4.4 | -13.2 | Dihydroorotase multifunctional complex type (NCBI) | compare |
| Rru_A3424 | | -4.2 | -7.5 | Orotidine-5'-phosphate decarboxylase (NCBI) | compare |
| Rru_A3165 | | -4.0 | -7.9 | Histidinol-phosphate phosphatase, putative, inositol monophosphatase (NCBI) | compare |
| Rru_A0514 | | -3.8 | -10.3 | Dihydroorotate dehydrogenase 2 (NCBI) | compare |
| Rru_A1895 | | -3.8 | -2.3 | Glutamine amidotransferase of anthranilate synthase (NCBI) | compare |
| Rru_A2507 | | -3.7 | -18.6 | Orotate phosphoribosyl transferase (NCBI) | compare |
| Rru_A3427 | | -3.7 | -13.9 | Tryptophan synthase, beta chain (NCBI) | compare |
| Rru_A0397 | | -3.2 | -4.6 | Argininosuccinate lyase (NCBI) | compare |
| Rru_A3596 | | -3.1 | -7.8 | Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (NCBI) | compare |
| Rru_A1432 | | -2.8 | -12.6 | Nicotinate-nucleotide pyrophosphorylase (NCBI) | compare |
| Rru_A3341 | | -2.7 | -1.8 | Acetylglutamate kinase (NCBI) | compare |
| Rru_A1827 | | -2.7 | -10.5 | Glycine hydroxymethyltransferase (NCBI) | compare |
| Rru_A3190 | | -2.6 | -2.9 | Aspartate carbamoyltransferase (NCBI) | compare |
| Rru_A1434 | | -2.5 | -13.9 | Quinolinate synthetase A (NCBI) | compare |
| Rru_A2771 | | -2.5 | -3.7 | Histidinol dehydrogenase (NCBI) | compare |
| Rru_A1865 | | -2.4 | -10.1 | Dihydrodipicolinate synthase subfamily (NCBI) | compare |
| Rru_A3380 | | -2.3 | -2.2 | hypothetical protein (NCBI) | compare |
| Rru_A1620 | | -2.2 | -3.2 | hypothetical protein (NCBI) | compare |
| Rru_A1021 | | -2.1 | -2.5 | Sigma 32 (RpoH) (NCBI) | compare |
| Rru_A0963 | | -2.0 | -5.4 | MifU-like protein, Fe-S cluster formation (NCBI) | compare |
| Rru_A1854 | | -1.9 | -3.8 | Pyridoxal phosphate biosynthetic protein PdxJ (NCBI) | compare |
| Rru_A1051 | | -1.8 | -2.5 | Phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI) | compare |
| Rru_A1437 | | -1.8 | -8.4 | Sodium:dicarboxylate symporter (NCBI) | compare |
| Rru_A2847 | | -1.8 | -3.1 | Transcriptional regulators, TraR/DksA family (NCBI) | compare |
| Rru_A1890 | | -1.7 | -2.5 | hypothetical protein (NCBI) | compare |
| Rru_A0752 | | -1.6 | -2.9 | hypothetical protein (NCBI) | compare |
| Rru_A2935 | | -1.6 | -6.8 | PAS/PAC Sensor Hybrid Histidine Kinase (NCBI) | compare |
| Rru_A1767 | | -1.6 | -1.9 | peptidase M23B (NCBI) | compare |
| Rru_A1286 | | -1.5 | -0.6 | hypothetical protein (NCBI) | compare |
| Rru_A3801 | | -1.5 | -3.1 | Enoyl-CoA hydratase/isomerase (NCBI) | compare |
| Rru_A1433 | | -1.5 | -6.2 | L-aspartate oxidase (NCBI) | compare |
| Rru_A1841 | | -1.5 | -1.7 | Flavin reductase-like, FMN-binding (NCBI) | compare |
| Rru_A1529 | | -1.4 | -5.1 | Transcriptional Regulator, ArsR family (NCBI) | compare |
| Rru_A1179 | | -1.4 | -2.5 | Transcriptional Regulator, DeoR family (NCBI) | compare |
| Rru_A0574 | | -1.4 | -2.7 | Carboxylyase-related protein (NCBI) | compare |
| Rru_A2887 | | -1.3 | -2.7 | GreA/GreB family elongation factor (NCBI) | compare |
| Rru_A0683 | | -1.3 | -0.7 | 3-deoxy-7-phosphoheptulonate synthase (NCBI) | compare |
| Rru_A1436 | | -1.3 | -5.4 | Histidine Kinase (NCBI) | compare |
| Rru_A3527 | | -1.3 | -5.1 | Protein of unknown function YGGT (NCBI) | compare |
| Rru_A1435 | | -1.3 | -4.8 | Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) | compare |
| Rru_A0010 | | -1.2 | -4.8 | Sigma-54 (RpoN) (NCBI) | compare |
| Rru_A2363 | | -1.2 | -7.7 | Endonuclease/exonuclease/phosphatase (NCBI) | compare |
| Rru_A0206 | | -1.2 | -2.6 | Cobalt chelatase, pCobS small subunit (NCBI) | compare |
| Rru_A2411 | | -1.1 | -7.1 | Aminotransferase, class I and II (NCBI) | compare |
| Rru_A2100 | | -1.1 | -7.0 | Protein of unknown function DUF81 (NCBI) | compare |
| Rru_A0224 | | -1.1 | -1.3 | Protein of unknown function DUF160 (NCBI) | compare |
| Rru_A1208 | | -1.0 | -5.2 | AFG1-like ATPase (NCBI) | compare |
| Rru_A2085 | | -1.0 | -2.6 | Nitrogen regulatory protein P-II (GlnB, GlnK) (NCBI) | compare |
| Rru_A3800 | | -1.0 | -3.7 | hypothetical protein (NCBI) | compare |
| Rru_A2201 | | -1.0 | -3.0 | Peptidase S1C, Do (NCBI) | compare |
| Rru_A3398 | | -1.0 | -1.4 | Transcriptional Regulator, XRE family (NCBI) | compare |
| Rru_A1837 | | -1.0 | -4.2 | Porphobilinogen synthase (NCBI) | compare |
| Rru_A1086 | | -0.9 | -3.4 | hypothetical protein (RefSeq) | compare |
| Rru_A0665 | | -0.9 | -2.5 | Response regulator receiver domain protein (CheY) (NCBI) | compare |
| Rru_A3533 | | -0.9 | -6.8 | hypothetical protein (NCBI) | compare |
| Rru_A2167 | | -0.9 | -2.9 | Phosphoribosylformylglycinamidine cyclo-ligase (NCBI) | compare |
| Rru_A2303 | | -0.9 | -2.1 | Deoxyribose-phosphate aldolase (NCBI) | compare |
| Rru_A1691 | | -0.9 | -5.8 | Spermine synthase (NCBI) | compare |
| Rru_A0454 | | -0.9 | -1.1 | Leucyl aminopeptidase (NCBI) | compare |
| Rru_A1692 | | -0.9 | -6.3 | S-adenosylmethionine decarboxylase related (NCBI) | compare |
| Rru_A2952 | | -0.8 | -2.9 | Methyltransferase small (NCBI) | compare |
| Rru_A1348 | | -0.8 | -2.0 | Protein of unknown function DUF81 (NCBI) | compare |
| Rru_A1366 | | -0.8 | -6.0 | Transcriptional Regulator, DeoR family (NCBI) | compare |
| Rru_A3571 | | -0.8 | -4.4 | Glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI) | compare |
| Rru_A2163 | | -0.8 | -0.9 | conserved hypothetical protein RP631 (NCBI) | compare |
| Rru_A1788 | | -0.8 | -1.7 | Response regulator receiver domain protein (CheY) (NCBI) | compare |
| Rru_A1084 | | -0.8 | -3.7 | 5-formyltetrahydrofolate cyclo-ligase (NCBI) | compare |
| Rru_A3548 | | -0.8 | -5.5 | Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase (NCBI) | compare |
| Rru_A3378 | | -0.8 | -4.1 | hypothetical protein (NCBI) | compare |
| Rru_A3743 | | -0.8 | -1.2 | hypothetical protein (NCBI) | compare |
| Rru_A3010 | | -0.8 | -3.8 | Transcriptional Regulator, DeoR family (NCBI) | compare |
| Rru_A1678 | | -0.8 | -1.9 | Nitrogen Metabolism Transcriptional Regulator, NtrC, Fis Family (NCBI) | compare |
| Rru_A0023 | | -0.8 | -2.0 | hypothetical protein (NCBI) | compare |
| Rru_A0484 | | -0.8 | -2.7 | hypothetical protein (NCBI) | compare |
| Rru_A3614 | | -0.7 | -2.9 | Maf-like protein (NCBI) | compare |
| Rru_A2115 | | -0.7 | -4.8 | Phosphoglucomutase/phosphomannomutase (NCBI) | compare |
| Rru_A0661 | | -0.7 | -3.2 | Hly-III related proteins (NCBI) | compare |
| Rru_A1648 | | -0.7 | -1.1 | Helix-turn-helix protein, CopG (NCBI) | compare |
| Rru_A3502 | | -0.7 | -0.8 | hypothetical protein (NCBI) | compare |
| Rru_A1308 | | -0.7 | -5.8 | Acyl-CoA dehydrogenase (NCBI) | compare |
| Rru_B0028 | | -0.7 | -1.9 | ABC transporter related (NCBI) | compare |
| Rru_A1776 | | -0.7 | -2.9 | Peptidase M50 (NCBI) | compare |
| Rru_A0006 | | -0.7 | -3.4 | Plasmid maintenance system antidote protein (NCBI) | compare |
| Rru_A2865 | | -0.7 | -3.4 | Peptidase M24 (NCBI) | compare |
| Rru_A1771 | | -0.7 | -1.2 | Sec-independent periplasmic protein translocase (NCBI) | compare |
| Rru_A2816 | | -0.7 | -1.1 | Transcriptional Regulator, TetR family (NCBI) | compare |
| Rru_A2547 | | -0.7 | -5.4 | N-formylglutamate amidohydrolase (NCBI) | compare |
| Rru_A1136 | | -0.6 | -4.5 | Periplasmic binding protein (NCBI) | compare |
| Rru_A1669 | | -0.6 | -2.2 | Transcriptional Regulator, MerR family (NCBI) | compare |
| Rru_A1536 | | -0.6 | -3.4 | UvrD/REP helicase (NCBI) | compare |
| Rru_A1047 | | -0.6 | -4.1 | 6-phosphofructokinase (NCBI) | compare |
| Rru_A1677 | | -0.6 | -2.2 | Signal transduction histidine kinase, nitrogen specific, NtrB (NCBI) | compare |
| Rru_A3599 | | -0.6 | -2.2 | 20S proteasome, A and B subunits (NCBI) | compare |
| Rru_A2244 | | -0.6 | -5.3 | Glycogen/starch/alpha-glucan phosphorylase (NCBI) | compare |
| Rru_A2346 | | -0.6 | -1.2 | hypothetical protein (NCBI) | compare |
| Rru_A1549 | | -0.6 | -3.0 | Trigger factor (NCBI) | compare |
| Rru_A1545 | | -0.6 | -2.4 | Putative diguanylate cyclase (GGDEF domain) (NCBI) | compare |
| Rru_A1593 | | -0.6 | -3.7 | Peptidase M50, putative membrane-associated zinc metallopeptidase (NCBI) | compare |
| Rru_A3268 | | -0.6 | -1.8 | hypothetical protein (NCBI) | compare |
| Rru_A3642 | | -0.6 | -1.3 | Negative regulator of class I heat shock protein (NCBI) | compare |
| Rru_A3393 | | -0.6 | -2.6 | Penicillin-binding protein 1A (NCBI) | compare |
| Rru_A0181 | | -0.6 | -2.9 | hypothetical protein (NCBI) | compare |
| Rru_A3386 | | -0.6 | -2.4 | BioY protein (NCBI) | compare |
| Rru_A3089 | | -0.6 | -2.6 | hypothetical protein (NCBI) | compare |
| Rru_A3693 | | -0.6 | -1.6 | Protein of unknown function UPF0011 (NCBI) | compare |
| Rru_A3322 | | -0.6 | -2.1 | Transcriptional Regulator, Crp/Fnr family (NCBI) | compare |
| Rru_A1768 | | -0.6 | -2.0 | Protein-L-isoaspartate(D-aspartate) O-methyltransferase (NCBI) | compare |
| Rru_A3338 | | -0.5 | -1.2 | Protein of unknown function DUF37 (NCBI) | compare |
| Rru_A3399 | | -0.5 | -2.5 | Transcriptional Regulator, BadM/Rrf2 family (NCBI) | compare |
| Rru_A2994 | | -0.5 | -2.1 | hypothetical protein (NCBI) | compare |
| Rru_A1015 | | -0.5 | -1.7 | Binding-protein-dependent transport systems inner membrane component (NCBI) | compare |
| Rru_A1444 | | -0.5 | -3.8 | Ribonucleoside-diphosphate reductase (NCBI) | compare |
| Rru_A0412 | | -0.5 | -1.3 | hypothetical protein (NCBI) | compare |
| Rru_A0643 | | -0.5 | -3.5 | Protein of unknown function DUF152 (NCBI) | compare |
| Rru_A0207 | | -0.5 | -1.6 | Cobalt chelatase, CobT subunit (NCBI) | compare |
| Rru_A3704 | | -0.5 | -0.8 | Periplasmic solute binding protein (NCBI) | compare |
| Rru_A2530 | | -0.5 | -2.9 | hypothetical protein (NCBI) | compare |
| Rru_A1126 | | -0.5 | -1.2 | ISBm1, transposase orfA (NCBI) | compare |
| Rru_A3202 | | -0.5 | -2.5 | DNA topoisomerase (NCBI) | compare |
| Rru_A2284 | | -0.5 | -2.3 | Dinitrogenase iron-molybdenum cofactor biosynthesis (NCBI) | compare |
| Rru_A1900 | | -0.5 | -0.9 | Transcriptional Regulator, AsnC family (NCBI) | compare |
| Rru_A3139 | | -0.5 | -2.9 | Transcriptional Regulator, GntR family (NCBI) | compare |
| Rru_A0046 | | -0.5 | -3.4 | Protein of unknown function DUF523 (NCBI) | compare |
| Rru_A1164 | | -0.5 | -0.5 | Peptidase M52, hydrogenase expression/formation protein (NCBI) | compare |
| Rru_A2874 | | -0.5 | -2.2 | FAD dependent oxidoreductase (NCBI) | compare |
| Rru_A0746 | | -0.5 | -1.3 | hypothetical protein (NCBI) | compare |
| Rru_A1894 | | -0.5 | -1.9 | heavy metal translocating P-type ATPase (NCBI) | compare |
| Rru_A0908 | | -0.5 | -1.0 | microcompartments protein (NCBI) | compare |
| Rru_A1814 | | -0.5 | -1.8 | Carbon monoxide dehydrogenase subunit G (NCBI) | compare |
| Rru_A1112 | | -0.5 | -0.5 | hypothetical protein (NCBI) | compare |
| Rru_A2326 | | -0.5 | -2.6 | Response regulator receiver domain protein (CheY) (NCBI) | compare |
| Rru_A3377 | | -0.5 | -1.6 | Alpha/beta hydrolase fold (NCBI) | compare |
| Rru_A3621 | | -0.5 | -2.2 | Methylated-DNA-(protein)-cysteine S-methyltransferase (NCBI) | compare |
| Rru_A2958 | | -0.5 | -2.2 | no description | compare |
| Rru_A0387 | | -0.4 | -2.4 | Antibiotic biosynthesis monooxygenase (NCBI) | compare |
| Rru_A3783 | | -0.4 | -3.4 | tRNA pseudouridine synthase B (NCBI) | compare |
| Rru_A2805 | | -0.4 | -1.6 | Protein of unknown function DUF214 (NCBI) | compare |
| Rru_A0515 | | -0.4 | -1.2 | HAD-superfamily subfamily IIA hydrolase (NCBI) | compare |
| Rru_A3349 | | -0.4 | -1.6 | transcription activator, effector binding (NCBI) | compare |
| Rru_A2857 | | -0.4 | -2.9 | Flagellar FlbT (NCBI) | compare |
| Rru_A2770 | | -0.4 | -0.8 | Uncharacterized conserved protein UCP032146 (NCBI) | compare |
| Rru_A2140 | | -0.4 | -2.4 | Transcriptional Regulator, XRE family (NCBI) | compare |
| Rru_A0406 | | -0.4 | -2.2 | DNA repair protein RadA (NCBI) | compare |
| Rru_A1698 | | -0.4 | -3.1 | Cation efflux protein (NCBI) | compare |
| Rru_A1445 | | -0.4 | -3.2 | Ribonucleoside-diphosphate reductase (NCBI) | compare |
| Rru_A3640 | | -0.4 | -0.7 | Ham1-like protein (NCBI) | compare |
| Rru_A2800 | | -0.4 | -2.8 | hypothetical protein (NCBI) | compare |
| Rru_A0770 | | -0.4 | -3.6 | Peptidase M23B (NCBI) | compare |
| Rru_A0424 | | -0.4 | -0.8 | hypothetical protein (NCBI) | compare |
| Rru_A2580 | | -0.4 | -2.0 | hypothetical protein (NCBI) | compare |
| Rru_A3660 | | -0.4 | -1.7 | tRNA and rRNA cytosine-C5-methylase (NCBI) | compare |
| Rru_A1402 | | -0.4 | -1.8 | CheW protein (NCBI) | compare |
| Rru_A0404 | | -0.4 | -3.7 | Amidophosphoribosyl transferase (NCBI) | compare |
| Rru_A1955 | | -0.4 | -1.3 | Phosphoribosyltransferase (NCBI) | compare |
| Rru_A1518 | | -0.4 | -0.8 | hypothetical protein (NCBI) | compare |
| Rru_A1898 | | -0.4 | -1.3 | SOS-response transcriptional repressor, LexA (NCBI) | compare |
| Rru_A1018 | | -0.4 | -2.7 | extracellular solute-binding protein, family 1 (NCBI) | compare |
| Rru_A1194 | | -0.4 | -1.6 | Protein of unknown function DUF134 (NCBI) | compare |
| Rru_A3168 | | -0.4 | -3.1 | Binding-protein-dependent transport systems inner membrane component (NCBI) | compare |
| Rru_A1137 | | -0.4 | -3.2 | transport system permease protein (NCBI) | compare |
| Rru_A1085 | | -0.4 | -2.2 | Metallophosphoesterase (NCBI) | compare |
| Rru_A1855 | | -0.4 | -2.4 | hypothetical protein (NCBI) | compare |
| Rru_A3766 | | -0.4 | -2.4 | Transcriptional Regulator, MucR family (NCBI) | compare |
| Rru_A2410 | | -0.4 | -1.5 | Homoserine dehydrogenase (NCBI) | compare |
| Rru_A1309 | | -0.4 | -2.2 | acetoacetyl-CoA reductase (NCBI) | compare |
| Rru_A3218 | | -0.4 | -1.4 | hypothetical protein (NCBI) | compare |
| Rru_A1255 | | -0.4 | -2.5 | Transcriptional Regulator, GntR family (NCBI) | compare |
| Rru_A3748 | | -0.4 | -1.6 | hypothetical protein (NCBI) | compare |