Experiment set7IT091 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM L-Carnitine

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS08320 +3.4 9.7 molybdopterin molybdotransferase MoeA compare
MMP_RS02885 +3.2 18.1 molybdopterin biosynthesis protein compare
MMP_RS01145 +1.6 9.5 ABC transporter ATP-binding protein compare
MMP_RS06715 +1.6 9.6 cache domain-containing protein compare
MMP_RS01140 +1.5 4.2 molybdate ABC transporter permease subunit compare
MMP_RS01135 +1.4 9.6 molybdate ABC transporter substrate-binding protein compare
MMP_RS06720 +1.3 4.8 response regulator transcription factor compare
MMP_RS03300 +1.2 1.3 TOBE domain-containing protein compare
MMP_RS06770 +1.1 6.7 DHH family phosphoesterase compare
MMP_RS06540 +1.0 2.9 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS08665 +0.9 7.5 hypothetical protein compare
MMP_RS00130 +0.9 1.6 nickel-responsive transcriptional regulator NikR compare
MMP_RS07960 +0.9 5.2 sugar phosphate isomerase/epimerase compare
MMP_RS00660 +0.9 6.2 alkaline phosphatase family protein compare
MMP_RS08070 +0.8 4.2 DUF2096 domain-containing protein compare
MMP_RS09025 +0.8 1.1 hypothetical protein compare
MMP_RS00655 +0.8 2.5 hypothetical protein compare
MMP_RS02290 +0.8 4.5 MBL fold metallo-hydrolase compare
MMP_RS06345 +0.8 5.9 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS00185 +0.8 5.9 potassium channel protein compare
MMP_RS06870 +0.8 5.8 DedA family protein compare
MMP_RS00395 +0.8 1.5 MGMT family protein compare
MMP_RS03150 +0.7 5.0 phosphoglycerate mutase compare
MMP_RS08275 +0.7 4.0 hypothetical protein compare
MMP_RS00450 +0.7 1.1 4Fe-4S binding protein compare
MMP_RS08485 +0.7 4.5 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS08280 +0.7 2.1 proteasome assembly chaperone family protein compare
MMP_RS06325 +0.7 1.4 hypothetical protein compare
MMP_RS00855 +0.7 4.3 DUF367 family protein compare
MMP_RS00295 +0.7 1.3 gamma carbonic anhydrase family protein compare
MMP_RS00990 +0.7 1.8 hypothetical protein compare
MMP_RS08415 +0.7 2.2 radical SAM protein compare
MMP_RS03390 +0.7 3.0 malate dehydrogenase compare
MMP_RS05445 +0.6 2.8 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS02310 +0.6 1.3 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMP_RS00345 +0.6 2.9 DUF2666 domain-containing protein compare
MMP_RS04885 +0.6 4.7 sulfite exporter TauE/SafE family protein compare
MMP_RS07615 +0.6 2.7 energy-coupling factor ABC transporter permease compare
MMP_RS04145 +0.6 1.4 hypothetical protein compare
MMP_RS00950 +0.6 2.7 site-2 protease family protein compare
MMP_RS01570 +0.6 1.2 hypothetical protein compare
MMP_RS07840 +0.6 1.7 ribonuclease III compare
MMP_RS08430 +0.6 2.8 HAD family hydrolase compare
MMP_RS07805 +0.6 2.8 ABC transporter permease compare
MMP_RS08640 +0.6 3.5 TIM barrel protein compare
MMP_RS02985 +0.6 1.9 hypothetical protein compare
MMP_RS06440 +0.5 3.1 CBS domain-containing protein compare
MMP_RS03340 +0.5 0.5 ABC transporter ATP-binding protein compare
MMP_RS08405 +0.5 3.5 MFS transporter compare
MMP_RS08455 +0.5 1.3 multiprotein bridging factor aMBF1 compare
MMP_RS08700 +0.5 2.4 hypothetical protein compare
MMP_RS02045 +0.5 1.1 tRNA-Met compare
MMP_RS02815 +0.5 1.8 hypothetical protein compare
MMP_RS05795 +0.5 2.0 redox-regulated ATPase YchF compare
MMP_RS08410 +0.5 3.6 DUF169 domain-containing protein compare
MMP_RS00665 +0.5 2.8 hypothetical protein compare
MMP_RS05085 +0.5 2.5 AAA family ATPase compare
MMP_RS06910 +0.5 3.0 RlmF-related methyltransferase compare
MMP_RS07815 +0.5 0.8 DUF2120 domain-containing protein compare
MMP_RS08555 +0.5 1.3 hypothetical protein compare
MMP_RS08850 +0.5 4.1 hypothetical protein compare
MMP_RS00155 +0.5 1.7 heavy metal-binding domain-containing protein compare
MMP_RS07770 +0.5 1.9 alanine racemase compare
MMP_RS07915 +0.5 2.5 DUF4870 domain-containing protein compare
MMP_RS04475 +0.5 2.3 nitrogen fixation compare
MMP_RS01250 +0.5 1.4 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS00055 +0.5 3.5 DUF2254 domain-containing protein compare
MMP_RS09050 +0.5 1.6 CAP domain-containing protein compare
MMP_RS00290 +0.5 2.9 hypothetical protein compare
MMP_RS05800 +0.5 2.8 B12-binding domain-containing radical SAM protein compare
MMP_RS07970 +0.5 1.7 hypothetical protein compare
MMP_RS00430 +0.5 1.3 hypothetical protein compare
MMP_RS08075 +0.4 2.1 DUF749 domain-containing protein compare
MMP_RS01685 +0.4 1.6 indolepyruvate oxidoreductase subunit beta compare
MMP_RS07765 +0.4 2.8 sodium:alanine symporter family protein compare
MMP_RS02375 +0.4 3.4 hypothetical protein compare
MMP_RS02315 +0.4 2.8 RimK family alpha-L-glutamate ligase compare
MMP_RS00325 +0.4 0.9 RNA-binding protein compare
MMP_RS09065 +0.4 3.2 hypothetical protein compare
MMP_RS02770 +0.4 1.8 hypothetical protein compare
MMP_RS01550 +0.4 2.1 DUF1624 domain-containing protein compare
MMP_RS06280 +0.4 2.4 alpha-glucan family phosphorylase compare
MMP_RS06570 +0.4 1.5 DUF190 domain-containing protein compare
MMP_RS01415 +0.4 1.2 DUF2067 domain-containing protein compare
MMP_RS08480 +0.4 2.7 molybdate ABC transporter substrate-binding protein compare
MMP_RS08085 +0.4 3.0 hypothetical protein compare
MMP_RS01280 +0.4 3.2 DUF515 domain-containing protein compare
MMP_RS08380 +0.4 1.9 phosphatase PAP2 family protein compare
MMP_RS06660 +0.4 2.5 glycosyltransferase family 4 protein compare
MMP_RS05090 +0.4 2.0 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS04165 +0.4 2.1 TetR/AcrR family transcriptional regulator compare
MMP_RS06575 +0.4 1.6 fluoride efflux transporter CrcB compare
MMP_RS01525 +0.4 0.9 nucleoside-diphosphate kinase compare
MMP_RS00940 +0.4 2.8 daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein compare
MMP_RS07425 +0.4 1.8 GTP-binding protein compare
MMP_RS06500 +0.4 2.2 ATP-binding protein compare
MMP_RS08325 +0.4 2.7 hypothetical protein compare
MMP_RS06150 +0.4 2.2 hypothetical protein compare
MMP_RS05365 +0.4 1.2 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS06965 +0.4 2.7 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS00975 +0.4 2.3 HD domain-containing protein compare
MMP_RS01120 +0.4 1.9 permease compare
MMP_RS08770 +0.4 1.9 hypothetical protein compare
MMP_RS06555 +0.4 1.0 cupin domain-containing protein compare
MMP_RS03470 +0.4 2.1 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS08160 +0.4 1.8 EamA family transporter compare
MMP_RS06860 +0.4 0.9 4Fe-4S binding protein compare
MMP_RS01650 +0.4 0.4 sulfurtransferase TusA family protein compare
MMP_RS08670 +0.4 1.3 metallophosphoesterase compare
MMP_RS06655 +0.4 2.4 glycoside hydrolase family 15 protein compare
MMP_RS07835 +0.4 1.1 TldD/PmbA family protein compare
MMP_RS02385 +0.4 1.4 ATP-binding protein compare
MMP_RS00335 +0.3 1.0 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMP_RS02705 +0.3 1.8 formylmethanofuran dehydrogenase subunit B compare
MMP_RS04800 +0.3 2.1 chemotaxis protein CheW compare
MMP_RS05080 +0.3 2.3 acetyl-CoA decarbonylase/synthase complex subunit delta compare
MMP_RS08285 +0.3 1.9 serine/threonine protein kinase compare
MMP_RS06675 +0.3 2.4 ADP-specific phosphofructokinase compare
MMP_RS02300 +0.3 1.5 NAD(P)H-dependent oxidoreductase compare
MMP_RS01630 +0.3 2.5 N-glycosylase/DNA lyase compare
MMP_RS08265 +0.3 1.2 rubrerythrin compare
MMP_RS07880 +0.3 1.4 AAA family ATPase compare
MMP_RS08205 +0.3 2.3 stage II sporulation protein M compare
MMP_RS05955 +0.3 0.9 CoB--CoM heterodisulfide reductase subunit C compare
MMP_RS02935 +0.3 1.7 A24 family peptidase compare
MMP_RS01150 +0.3 1.7 aldo/keto reductase compare
MMP_RS08390 +0.3 1.4 DUF5400 domain-containing protein compare
MMP_RS05060 +0.3 1.7 AAA family ATPase compare
MMP_RS08845 +0.3 1.3 archaellum operon transcriptional activator EarA family protein compare
MMP_RS07620 +0.3 1.1 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS07895 +0.3 1.2 cytochrome c compare
MMP_RS05095 +0.3 1.5 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMP_RS08620 +0.3 1.1 flagellar accessory protein FlaH compare
MMP_RS02490 +0.3 1.4 hypothetical protein compare
MMP_RS01675 +0.3 0.6 hypothetical protein compare
MMP_RS07125 +0.3 0.9 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS01985 +0.3 1.3 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS07890 +0.3 0.9 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS00630 +0.3 1.8 ECF transporter S component compare
MMP_RS03840 +0.3 1.4 hypothetical protein compare
MMP_RS05155 +0.3 1.3 hypothetical protein compare
MMP_RS00705 +0.3 0.6 hypothetical protein compare
MMP_RS04530 +0.3 1.6 ABC transporter permease compare
MMP_RS03965 +0.3 0.8 hypothetical protein compare
MMP_RS01635 +0.3 1.5 thiamine pyrophosphate-dependent enzyme compare
MMP_RS05055 +0.3 2.1 DUF166 domain-containing protein compare
MMP_RS02390 +0.3 1.2 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS01660 +0.3 0.8 hypothetical protein compare
MMP_RS08580 +0.3 0.6 flagellin compare
MMP_RS06710 +0.3 1.8 selenium-binding protein compare
MMP_RS08245 +0.3 1.5 DUF4013 domain-containing protein compare
MMP_RS02295 +0.3 1.9 TatD family hydrolase compare
MMP_RS04050 +0.3 1.1 hypothetical protein compare
MMP_RS08990 +0.3 1.3 hypothetical protein compare
MMP_RS03910 +0.3 0.7 hypothetical protein compare
MMP_RS06140 +0.3 1.2 radical SAM protein compare
MMP_RS09060 +0.3 1.7 hypothetical protein compare
MMP_RS02510 +0.3 1.9 site-specific integrase compare
MMP_RS08310 +0.3 0.6 TMEM165/GDT1 family protein compare
MMP_RS05715 +0.3 1.3 hypothetical protein compare
MMP_RS03065 +0.3 1.0 AzlC family ABC transporter permease compare
MMP_RS05450 +0.3 1.0 CoB--CoM heterodisulfide reductase subunit C compare
MMP_RS00145 +0.3 1.4 ATP-dependent Clp protease proteolytic subunit compare
MMP_RS04815 +0.3 1.6 chemotaxis protein CheD compare
MMP_RS01275 +0.3 1.3 class III signal peptide-containing protein compare
MMP_RS08200 +0.3 1.8 archaeosine synthase subunit alpha compare
MMP_RS01495 +0.3 1.5 TraB/GumN family protein compare
MMP_RS01270 +0.3 1.6 prepilin peptidase compare
MMP_RS00235 +0.3 1.7 HDIG domain-containing protein compare
MMP_RS00120 +0.3 1.4 LysR family transcriptional regulator compare
MMP_RS08130 +0.3 1.7 IGHMBP2 family helicase compare
MMP_RS05970 +0.3 0.7 class II SORL domain-containing protein compare
MMP_RS01980 +0.3 1.8 trimeric intracellular cation channel family protein compare
MMP_RS07650 +0.3 1.8 TldD/PmbA family protein compare
MMP_RS03675 +0.3 2.0 RimK family alpha-L-glutamate ligase compare
MMP_RS08250 +0.3 1.4 pyruvate kinase compare
MMP_RS08235 +0.3 0.7 hypothetical protein compare
MMP_RS05100 +0.3 2.0 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMP_RS08630 +0.3 1.4 archaellar assembly protein FlaJ compare
MMP_RS07985 +0.3 1.6 nitroreductase family protein compare
MMP_RS07885 +0.2 1.1 tripartite tricarboxylate transporter permease compare
MMP_RS02380 +0.2 1.1 ATP-binding protein compare
MMP_RS01100 +0.2 0.4 ABC transporter ATP-binding protein compare
MMP_RS06045 +0.2 2.0 DNA polymerase compare
MMP_RS05835 +0.2 0.2 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS09030 +0.2 1.4 hypothetical protein compare
MMP_RS03235 +0.2 1.2 tRNA pseudouridine(13) synthase TruD compare
MMP_RS08315 +0.2 1.1 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS06305 +0.2 1.2 transporter substrate-binding domain-containing protein compare
MMP_RS08470 +0.2 1.2 ATP-binding cassette domain-containing protein compare
MMP_RS01460 +0.2 1.0 hypothetical protein compare
MMP_RS06735 +0.2 1.1 class I SAM-dependent rRNA methyltransferase compare
MMP_RS00195 +0.2 2.1 DUF4013 domain-containing protein compare
MMP_RS06585 +0.2 0.5 DMT family protein compare
MMP_RS08685 +0.2 1.6 hypothetical protein compare
MMP_RS01060 +0.2 1.8 calcium/sodium antiporter compare
MMP_RS08610 +0.2 1.3 flagellar protein F compare
MMP_RS01115 +0.2 1.5 molybdopterin molybdotransferase MoeA compare
MMP_RS07800 +0.2 1.3 ATP-binding cassette domain-containing protein compare
MMP_RS08600 +0.2 0.6 flagellar protein D compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source L-Carnitine hydrochloride in Methanococcus maripaludis S2

For nitrogen source L-Carnitine hydrochloride across organisms