Experiment set7IT090 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM L-Histidine

200 most important genes:

  gene name fitness t score description  
MMP_RS08165 -6.2 -2.3 phosphoglycerate dehydrogenase compare
MMP_RS06355 -5.8 -4.1 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS07345 -5.7 -10.9 glycine synthesis protein GlyXL (from data) compare
MMP_RS03960 -5.6 -1.3 hypothetical protein compare
MMP_RS04445 -5.6 -9.7 P-II family nitrogen regulator compare
MMP_RS04465 -5.5 -22.1 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS03315 -5.5 -2.2 ferrous iron transport protein A compare
MMP_RS04450 -5.5 -13.9 P-II family nitrogen regulator compare
MMP_RS01175 -5.4 -6.3 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS00555 -5.4 -11.0 MFS transporter compare
MMP_RS08720 -5.4 -2.5 4Fe-4S binding protein compare
MMP_RS04455 -5.3 -24.4 nitrogenase subunit alpha compare
MMP_RS04460 -5.2 -22.9 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS04440 -5.2 -14.8 nitrogenase iron protein compare
MMP_RS04470 -5.1 -20.8 nitrogenase compare
MMP_RS03450 -5.0 -3.7 glycine synthesis protein GlyXS (from data) compare
MMP_RS00455 -5.0 -13.3 orotate phosphoribosyltransferase-like protein compare
MMP_RS07185 -4.8 -17.4 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS07635 -4.8 -11.5 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS01020 -4.8 -1.6 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS02675 -4.7 -5.6 hypothetical protein compare
MMP_RS05515 -4.7 -8.1 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS05500 -4.6 -11.9 2-isopropylmalate synthase compare
MMP_RS08715 -4.5 -3.4 formylmethanofuran dehydrogenase subunit B compare
MMP_RS06625 -4.5 -3.4 DNA primase compare
MMP_RS02685 -4.4 -15.8 molybdate ABC transporter substrate-binding protein compare
MMP_RS04710 -4.4 -3.0 hypothetical protein compare
MMP_RS03015 -4.4 -15.4 GTP 3' 8-cyclase MoaA compare
MMP_RS02010 -4.4 -13.9 PHP domain-containing protein compare
MMP_RS06350 -4.3 -8.2 HesA/MoeB/ThiF family protein compare
MMP_RS02240 -4.3 -5.7 methanogenesis marker 7 protein compare
MMP_RS01500 -4.3 -4.0 CBS domain-containing protein compare
MMP_RS03600 -4.2 -4.0 triose-phosphate isomerase compare
MMP_RS05265 -4.1 -3.2 2-isopropylmalate synthase compare
MMP_RS07845 -4.1 -3.5 LL-diaminopimelate aminotransferase compare
MMP_RS04605 -4.1 -6.9 cobalt ECF transporter T component CbiQ compare
MMP_RS06730 -4.1 -2.6 phosphopantothenate/pantothenate synthetase compare
MMP_RS00750 -4.0 -3.9 fumarate hydratase compare
MMP_RS02145 -4.0 -14.1 winged helix-turn-helix transcriptional regulator compare
MMP_RS01005 -3.9 -2.1 riboflavin synthase compare
MMP_RS07525 -3.8 -8.4 4Fe-4S binding protein compare
MMP_RS03640 -3.8 -4.7 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS07380 -3.7 -3.0 transcription elongation factor Spt5 compare
MMP_RS02680 -3.7 -10.8 ABC transporter permease compare
MMP_RS09020 -3.6 -3.1 hypothetical protein compare
MMP_RS03435 -3.6 -2.6 ketol-acid reductoisomerase compare
MMP_RS00040 -3.6 -7.8 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS05250 -3.6 -2.9 NFYB/HAP3 family transcription factor subunit compare
MMP_RS06400 -3.5 -2.4 4Fe-4S binding protein compare
MMP_RS00735 -3.5 -5.5 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS03700 -3.5 -13.8 sodium:proton antiporter compare
MMP_RS07435 -3.4 -3.1 GMP synthase subunit A compare
MMP_RS02355 -3.4 -5.6 30S ribosomal protein S27ae compare
MMP_RS01225 -3.3 -7.0 DUF5379 domain-containing protein compare
MMP_RS06120 -3.3 -3.8 UPF0147 family protein compare
MMP_RS07735 -3.3 -1.5 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS07445 -3.3 -6.3 helix-turn-helix domain-containing protein compare
MMP_RS05930 -3.2 -3.6 3-isopropylmalate dehydratase large subunit compare
MMP_RS06475 -3.2 -6.6 FAD-dependent oxidoreductase compare
MMP_RS02730 -3.2 -14.9 ModD protein compare
MMP_RS01830 -3.2 -2.2 tRNA-Val compare
MMP_RS04620 -3.2 -15.7 cobalt transporter CbiM compare
MMP_RS03035 -3.1 -6.0 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS00725 -3.1 -12.1 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS07730 -3.1 -3.0 pyruvate synthase subunit beta compare
MMP_RS07695 -3.1 -12.8 DUF3236 domain-containing protein compare
MMP_RS07600 -3.1 -4.2 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS02670 -3.1 -11.3 ATP-binding cassette domain-containing protein compare
MMP_RS06270 -3.1 -6.5 TIGR00300 family protein compare
MMP_RS04090 -3.1 -4.8 hypothetical protein compare
MMP_RS04615 -3.0 -5.8 PDGLE domain-containing protein compare
MMP_RS02245 -3.0 -5.9 hypothetical protein compare
MMP_RS07955 -2.9 -5.8 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS04850 -2.9 -21.5 UPF0254 family protein compare
MMP_RS00730 -2.9 -8.2 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS02165 -2.9 -11.1 tRNA-dihydrouridine synthase compare
MMP_RS01545 -2.9 -1.7 CBS domain-containing protein compare
MMP_RS01755 -2.8 -2.2 DUF2097 domain-containing protein compare
MMP_RS01380 -2.8 -8.0 PHP domain-containing protein compare
MMP_RS06285 -2.8 -4.2 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS00985 -2.8 -6.3 CDC48 family AAA ATPase compare
MMP_RS07075 -2.8 -6.1 phosphomannomutase/phosphoglucomutase compare
MMP_RS04900 -2.8 -20.3 hypothetical protein compare
MMP_RS05430 -2.8 -4.6 TIGR00288 family NYN domain-containing protein compare
MMP_RS06395 -2.8 -6.2 ThiF family adenylyltransferase compare
MMP_RS08650 -2.7 -4.7 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS01610 -2.7 -4.7 hypothetical protein compare
MMP_RS05925 -2.7 -5.8 small nuclear ribonucleoprotein compare
MMP_RS07700 -2.7 -13.6 DUF1188 domain-containing protein compare
MMP_RS01725 -2.7 -6.6 class I SAM-dependent methyltransferase family protein compare
MMP_RS06295 -2.7 -10.4 methanogenesis marker 14 protein compare
MMP_RS02345 -2.7 -5.9 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS00915 -2.7 -9.1 DUF116 domain-containing protein compare
MMP_RS04585 -2.7 -14.3 AIR synthase related protein compare
MMP_RS01445 -2.7 -12.9 hypothetical protein compare
MMP_RS04890 -2.6 -1.4 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS03445 -2.6 -1.5 methanogenesis marker 17 protein compare
MMP_RS03025 -2.6 -8.1 molybdenum cofactor guanylyltransferase compare
MMP_RS04870 -2.6 -9.0 TIGR02253 family HAD-type hydrolase compare
MMP_RS06725 -2.5 -12.6 hypothetical protein compare
MMP_RS00685 -2.5 -6.1 2-phospho-L-lactate guanylyltransferase compare
MMP_RS06315 -2.5 -1.1 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS07605 -2.5 -5.2 diadenylate cyclase compare
MMP_RS04215 -2.5 -3.4 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS06855 -2.5 -13.4 hypothetical protein compare
MMP_RS08500 -2.4 -7.6 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS02800 -2.4 -10.0 nucleotidyltransferase domain-containing protein compare
MMP_RS06175 -2.4 -7.0 winged helix-turn-helix transcriptional regulator compare
MMP_RS07630 -2.4 -2.4 ATP-binding cassette domain-containing protein compare
MMP_RS08790 -2.4 -3.7 translation initiation factor IF-2 subunit alpha compare
MMP_RS06020 -2.4 -6.1 archaeoflavoprotein AfpA compare
MMP_RS04790 -2.3 -12.9 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS00695 -2.3 -1.4 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS00310 -2.3 -7.4 CBS domain-containing protein compare
MMP_RS08745 -2.3 -9.7 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS06340 -2.2 -9.4 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS08645 -2.2 -11.5 UPF0179 family protein compare
MMP_RS07200 -2.2 -8.1 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS01800 -2.2 -5.1 TIGR00303 family protein compare
MMP_RS01265 -2.2 -2.1 hypothetical protein compare
MMP_RS07390 -2.2 -4.1 cell division protein FtsZ compare
MMP_RS04685 -2.2 -4.0 DUF126 domain-containing protein compare
MMP_RS05440 -2.2 -10.4 winged helix-turn-helix transcriptional regulator compare
MMP_RS01885 -2.2 -12.1 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS06900 -2.1 -4.5 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS00810 -2.1 -8.3 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS03250 -2.1 -4.5 MJ1244 family protein compare
MMP_RS06230 -2.1 -3.0 helix-turn-helix domain-containing protein compare
MMP_RS00315 -2.1 -8.0 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS08210 -2.1 -3.8 phosphatidylglycerophosphatase A compare
MMP_RS06670 -2.1 -6.9 glucose-6-phosphate isomerase compare
MMP_RS01880 -2.0 -9.6 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS05535 -2.0 -5.4 hypothetical protein compare
MMP_RS03110 -2.0 -8.7 glycosyltransferase family 2 protein compare
MMP_RS08635 -2.0 -2.9 UbiA family prenyltransferase compare
MMP_RS04875 -2.0 -6.0 energy-converting hydrogenase B subunit P compare
MMP_RS07710 -2.0 -9.7 cell division protein FtsZ compare
MMP_RS07575 -2.0 -2.7 RNA ligase partner protein compare
MMP_RS06630 -2.0 -1.0 UPF0058 family protein compare
MMP_RS01325 -2.0 -2.0 dihydroneopterin aldolase family protein compare
MMP_RS00300 -2.0 -0.9 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS08195 -2.0 -9.5 hypothetical protein compare
MMP_RS01795 -1.9 -2.3 methanogenesis marker 6 protein compare
MMP_RS05845 -1.9 -2.5 tRNA-intron lyase compare
MMP_RS05550 -1.9 -1.1 cation:proton antiporter compare
MMP_RS01220 -1.9 -8.7 hypothetical protein compare
MMP_RS07705 -1.9 -8.1 transcriptional regulator compare
MMP_RS07355 -1.9 -1.3 transcription factor S compare
MMP_RS01875 -1.8 -9.7 N-acetyltransferase compare
MMP_RS00515 -1.8 -1.2 DUF655 domain-containing protein compare
MMP_RS05280 -1.8 -8.5 COG1361 S-layer family protein compare
MMP_RS08435 -1.8 -2.6 Era-like GTP-binding protein compare
MMP_RS02195 -1.8 -4.7 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS03090 -1.8 -5.7 cation:proton antiporter compare
MMP_RS01665 -1.8 -3.4 DUF2111 domain-containing protein compare
MMP_RS03580 -1.8 -3.4 signal recognition particle-docking protein FtsY compare
MMP_RS05540 -1.8 -2.5 hypothetical protein compare
MMP_RS00035 -1.8 -7.0 DUF2098 family protein compare
MMP_RS02780 -1.7 -5.9 hypothetical protein compare
MMP_RS07365 -1.7 -9.7 2-phosphoglycerate kinase compare
MMP_RS01900 -1.7 -12.5 hypothetical protein compare
MMP_RS05640 -1.7 -7.0 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS08320 -1.7 -4.6 molybdopterin molybdotransferase MoeA compare
MMP_RS05460 -1.7 -8.2 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS05285 -1.7 -7.2 MMPL family transporter compare
MMP_RS00320 -1.7 -2.4 class I SAM-dependent methyltransferase compare
MMP_RS06975 -1.7 -2.7 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS07090 -1.7 -7.7 tRNA (adenine-N1)-methyltransferase compare
MMP_RS01890 -1.7 -5.2 nucleotide sugar dehydrogenase compare
MMP_RS04780 -1.7 -3.3 ribonuclease P compare
MMP_RS04720 -1.6 -3.9 DedA family protein compare
MMP_RS04955 -1.6 -6.1 DNA topoisomerase I compare
MMP_RS06600 -1.6 -1.6 class III signal peptide-containing protein compare
MMP_RS03400 -1.6 -3.8 archease compare
MMP_RS03475 -1.6 -1.0 hypothetical protein compare
MMP_RS07535 -1.6 -6.5 4Fe-4S binding protein compare
MMP_RS05920 -1.6 -0.5 50S ribosomal protein L37e compare
MMP_RS05345 -1.6 -6.5 hypothetical protein compare
MMP_RS00895 -1.6 -4.4 hypothetical protein compare
MMP_RS01190 -1.6 -7.3 cadmium-translocating P-type ATPase compare
MMP_RS08460 -1.5 -2.6 proteasome-activating nucleotidase compare
MMP_RS06105 -1.5 -7.5 hydrogenase maturation peptidase HycI compare
MMP_RS02340 -1.5 -1.6 DNA-directed RNA polymerase subunit E'' compare
MMP_RS05425 -1.5 -3.8 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS03485 -1.4 -3.0 TIGR00267 family protein compare
MMP_RS01700 -1.4 -0.9 dihydroxy-acid dehydratase compare
MMP_RS06885 -1.4 -3.1 50S ribosome-binding GTPase compare
MMP_RS01440 -1.4 -4.2 NAAT family transporter compare
MMP_RS08820 -1.4 -4.8 hypothetical protein compare
MMP_RS03420 -1.4 -2.6 acetolactate synthase small subunit compare
MMP_RS01925 -1.4 -6.9 DUF1616 domain-containing protein compare
MMP_RS07410 -1.4 -7.0 4-demethylwyosine synthase TYW1 compare
MMP_RS07545 -1.3 -1.3 HTH domain-containing protein compare
MMP_RS05555 -1.3 -1.9 DUF4040 domain-containing protein compare
MMP_RS01455 -1.3 -2.1 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS06375 -1.3 -1.8 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS06925 -1.3 -2.2 ribonuclease VapC4 compare
MMP_RS02190 -1.3 -2.8 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS03205 -1.3 -1.9 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS03390 -1.3 -6.0 malate dehydrogenase compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source L-Histidine in Methanococcus maripaludis S2

For nitrogen source L-Histidine across organisms