Experiment set7IT090 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM L-Histidine

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS00185 +1.3 8.8 potassium channel protein compare
MMP_RS00395 +1.3 2.4 MGMT family protein compare
MMP_RS02290 +1.2 5.8 MBL fold metallo-hydrolase compare
MMP_RS04885 +1.1 8.5 sulfite exporter TauE/SafE family protein compare
MMP_RS04145 +1.0 2.2 hypothetical protein compare
MMP_RS08930 +1.0 2.1 hypothetical protein compare
MMP_RS03300 +1.0 1.1 TOBE domain-containing protein compare
MMP_RS06715 +1.0 7.3 cache domain-containing protein compare
MMP_RS06720 +0.9 4.8 response regulator transcription factor compare
MMP_RS01145 +0.9 4.5 ABC transporter ATP-binding protein compare
MMP_RS07805 +0.9 4.0 ABC transporter permease compare
MMP_RS07840 +0.9 3.3 ribonuclease III compare
MMP_RS05970 +0.9 3.4 class II SORL domain-containing protein compare
MMP_RS06575 +0.9 3.2 fluoride efflux transporter CrcB compare
MMP_RS03965 +0.8 2.4 hypothetical protein compare
MMP_RS01135 +0.8 5.3 molybdate ABC transporter substrate-binding protein compare
MMP_RS01100 +0.8 1.5 ABC transporter ATP-binding protein compare
MMP_RS00290 +0.8 3.5 hypothetical protein compare
MMP_RS01460 +0.8 2.9 hypothetical protein compare
MMP_RS08275 +0.7 3.6 hypothetical protein compare
MMP_RS00660 +0.7 5.2 alkaline phosphatase family protein compare
MMP_RS01055 +0.7 2.5 hypothetical protein compare
MMP_RS02985 +0.7 1.8 hypothetical protein compare
MMP_RS05695 +0.7 4.7 phospholipase D-like domain-containing protein compare
MMP_RS03490 +0.7 1.5 DUF2115 domain-containing protein compare
MMP_RS03065 +0.7 2.4 AzlC family ABC transporter permease compare
MMP_RS00130 +0.7 1.1 nickel-responsive transcriptional regulator NikR compare
MMP_RS07800 +0.7 3.3 ATP-binding cassette domain-containing protein compare
MMP_RS08485 +0.7 3.2 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS02915 +0.7 3.8 amino acid ABC transporter permease compare
MMP_RS08090 +0.6 2.9 hypothetical protein compare
MMP_RS03340 +0.6 0.6 ABC transporter ATP-binding protein compare
MMP_RS02900 +0.6 0.4 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS06540 +0.6 1.0 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS00655 +0.6 2.0 hypothetical protein compare
MMP_RS06345 +0.6 4.1 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS06500 +0.6 3.4 ATP-binding protein compare
MMP_RS00450 +0.6 1.1 4Fe-4S binding protein compare
MMP_RS06440 +0.6 3.0 CBS domain-containing protein compare
MMP_RS00950 +0.6 2.7 site-2 protease family protein compare
MMP_RS01155 +0.6 2.0 XRE family transcriptional regulator compare
MMP_RS08670 +0.6 2.6 metallophosphoesterase compare
MMP_RS00855 +0.6 2.9 DUF367 family protein compare
MMP_RS01130 +0.6 3.2 flavoprotein compare
MMP_RS08555 +0.5 1.2 hypothetical protein compare
MMP_RS08640 +0.5 3.3 TIM barrel protein compare
MMP_RS03220 +0.5 1.8 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS07620 +0.5 1.8 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS06685 +0.5 3.3 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS03560 +0.5 4.1 Na+/H+ antiporter NhaC family protein compare
MMP_RS06910 +0.5 2.2 RlmF-related methyltransferase compare
MMP_RS00305 +0.5 1.1 phosphoribosyl-ATP diphosphatase compare
MMP_RS08235 +0.5 1.9 hypothetical protein compare
MMP_RS00335 +0.5 1.8 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMP_RS08775 +0.5 2.2 methanogenesis marker 9 domain-containing protein compare
MMP_RS07770 +0.5 2.2 alanine racemase compare
MMP_RS07765 +0.5 3.1 sodium:alanine symporter family protein compare
MMP_RS00650 +0.5 2.8 ABC transporter ATP-binding protein compare
MMP_RS07895 +0.5 1.5 cytochrome c compare
MMP_RS06150 +0.5 2.5 hypothetical protein compare
MMP_RS07890 +0.5 0.9 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS00155 +0.5 1.8 heavy metal-binding domain-containing protein compare
MMP_RS05835 +0.5 0.5 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS01095 +0.5 1.5 iron ABC transporter permease compare
MMP_RS08700 +0.5 2.2 hypothetical protein compare
MMP_RS01685 +0.4 1.5 indolepyruvate oxidoreductase subunit beta compare
MMP_RS08600 +0.4 1.1 flagellar protein D compare
MMP_RS00990 +0.4 0.9 hypothetical protein compare
MMP_RS09025 +0.4 0.5 hypothetical protein compare
MMP_RS08990 +0.4 1.6 hypothetical protein compare
MMP_RS05110 +0.4 2.2 16S ribosomal RNA methyltransferase A compare
MMP_RS06770 +0.4 2.5 DHH family phosphoesterase compare
MMP_RS01635 +0.4 2.3 thiamine pyrophosphate-dependent enzyme compare
MMP_RS07915 +0.4 2.2 DUF4870 domain-containing protein compare
MMP_RS00665 +0.4 1.2 hypothetical protein compare
MMP_RS00085 +0.4 2.6 DNA cytosine methyltransferase compare
MMP_RS05140 +0.4 1.2 helix-turn-helix transcriptional regulator compare
MMP_RS08400 +0.4 1.5 MJ0307 family thioredoxin compare
MMP_RS02390 +0.4 2.3 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS04610 +0.4 1.1 Dabb family protein compare
MMP_RS01495 +0.4 2.2 TraB/GumN family protein compare
MMP_RS03150 +0.4 2.8 phosphoglycerate mutase compare
MMP_RS02490 +0.4 1.9 hypothetical protein compare
MMP_RS08410 +0.4 1.7 DUF169 domain-containing protein compare
MMP_RS02745 +0.4 1.0 hypothetical protein compare
MMP_RS02965 +0.4 1.9 carboxymuconolactone decarboxylase family protein compare
MMP_RS01620 +0.4 1.9 hypothetical protein compare
MMP_RS05985 +0.4 1.0 hypothetical protein compare
MMP_RS08590 +0.4 1.3 flagellin compare
MMP_RS08260 +0.4 2.2 DUF99 family protein compare
MMP_RS03215 +0.4 2.3 MBL fold metallo-hydrolase compare
MMP_RS08130 +0.4 2.0 IGHMBP2 family helicase compare
MMP_RS00385 +0.4 1.9 P-II family nitrogen regulator compare
MMP_RS05365 +0.4 1.2 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS08200 +0.4 2.5 archaeosine synthase subunit alpha compare
MMP_RS07885 +0.4 1.5 tripartite tricarboxylate transporter permease compare
MMP_RS01060 +0.4 2.5 calcium/sodium antiporter compare
MMP_RS06650 +0.4 1.9 glycoside hydrolase family 57 protein compare
MMP_RS00295 +0.4 1.0 gamma carbonic anhydrase family protein compare
MMP_RS07970 +0.4 1.2 hypothetical protein compare
MMP_RS01640 +0.3 2.1 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMP_RS01120 +0.3 2.0 permease compare
MMP_RS02375 +0.3 2.5 hypothetical protein compare
MMP_RS08760 +0.3 0.7 hypothetical protein compare
MMP_RS06675 +0.3 1.7 ADP-specific phosphofructokinase compare
MMP_RS01210 +0.3 2.1 sodium:solute symporter compare
MMP_RS01140 +0.3 1.0 molybdate ABC transporter permease subunit compare
MMP_RS00940 +0.3 2.0 daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein compare
MMP_RS04050 +0.3 1.1 hypothetical protein compare
MMP_RS00700 +0.3 1.4 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS07195 +0.3 2.1 M20 family metallo-hydrolase compare
MMP_RS03840 +0.3 0.9 hypothetical protein compare
MMP_RS00430 +0.3 1.1 hypothetical protein compare
MMP_RS06660 +0.3 2.0 glycosyltransferase family 4 protein compare
MMP_RS00825 +0.3 1.0 fumarylacetoacetate hydrolase family protein compare
MMP_RS00670 +0.3 0.9 TIM barrel protein compare
MMP_RS04165 +0.3 1.3 TetR/AcrR family transcriptional regulator compare
MMP_RS01550 +0.3 1.5 DUF1624 domain-containing protein compare
MMP_RS08160 +0.3 1.2 EamA family transporter compare
MMP_RS08265 +0.3 1.2 rubrerythrin compare
MMP_RS04945 +0.3 1.1 hypothetical protein compare
MMP_RS00795 +0.3 1.8 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS01115 +0.3 1.4 molybdopterin molybdotransferase MoeA compare
MMP_RS00800 +0.3 1.8 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS05675 +0.3 1.0 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS03100 +0.3 1.1 hypothetical protein compare
MMP_RS07625 +0.3 0.9 cobalt ECF transporter T component CbiQ compare
MMP_RS00345 +0.3 1.3 DUF2666 domain-containing protein compare
MMP_RS07650 +0.3 2.2 TldD/PmbA family protein compare
MMP_RS06990 +0.3 1.3 CatB-related O-acetyltransferase compare
MMP_RS01660 +0.3 0.9 hypothetical protein compare
MMP_RS01630 +0.3 1.0 N-glycosylase/DNA lyase compare
MMP_RS01435 +0.3 1.7 DMT family transporter compare
MMP_RS04205 +0.3 1.4 carboxymuconolactone decarboxylase family protein compare
MMP_RS07125 +0.3 0.9 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS05715 +0.3 1.4 hypothetical protein compare
MMP_RS06250 +0.3 1.8 hypothetical protein compare
MMP_RS08625 +0.3 1.6 type II/IV secretion system ATPase subunit compare
MMP_RS01465 +0.3 1.0 hypothetical protein compare
MMP_RS07335 +0.3 1.0 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMP_RS00630 +0.3 1.1 ECF transporter S component compare
MMP_RS01570 +0.3 0.5 hypothetical protein compare
MMP_RS07880 +0.3 1.2 AAA family ATPase compare
MMP_RS02605 +0.3 0.3 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS08455 +0.3 0.8 multiprotein bridging factor aMBF1 compare
MMP_RS03895 +0.3 0.9 hypothetical protein compare
MMP_RS06065 +0.3 2.2 iron ABC transporter substrate-binding protein compare
MMP_RS09050 +0.3 0.6 CAP domain-containing protein compare
MMP_RS09065 +0.3 1.8 hypothetical protein compare
MMP_RS08480 +0.3 1.4 molybdate ABC transporter substrate-binding protein compare
MMP_RS02305 +0.3 1.7 DUF378 domain-containing protein compare
MMP_RS01985 +0.3 1.0 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS04195 +0.3 0.8 flavodoxin compare
MMP_RS08285 +0.3 1.3 serine/threonine protein kinase compare
MMP_RS07590 +0.3 1.5 hypothetical protein compare
MMP_RS08380 +0.3 0.9 phosphatase PAP2 family protein compare
MMP_RS07550 +0.3 1.5 L-serine ammonia-lyase iron-sulfur-dependent subunit alpha compare
MMP_RS08890 +0.3 2.0 glycosyltransferase family 4 protein compare
MMP_RS01065 +0.3 1.8 alpha/beta hydrolase compare
MMP_RS04960 +0.3 1.8 cytochrome c biogenesis CcdA family protein compare
MMP_RS03675 +0.3 1.7 RimK family alpha-L-glutamate ligase compare
MMP_RS00960 +0.3 0.7 iron export ABC transporter permease subunit FetB compare
MMP_RS08770 +0.3 1.2 hypothetical protein compare
MMP_RS08750 +0.2 0.7 hypothetical protein compare
MMP_RS07715 +0.2 1.4 YfcE family phosphodiesterase compare
MMP_RS06300 +0.2 1.5 ABC transporter substrate-binding protein compare
MMP_RS08835 +0.2 1.7 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS07720 +0.2 1.6 4Fe-4S binding protein compare
MMP_RS08405 +0.2 1.0 MFS transporter compare
MMP_RS06550 +0.2 1.3 AMP-binding protein compare
MMP_RS04060 +0.2 0.9 hypothetical protein compare
MMP_RS00565 +0.2 1.2 CBS domain-containing protein compare
MMP_RS06055 +0.2 1.0 peroxiredoxin compare
MMP_RS02890 +0.2 1.3 TIGR00296 family protein compare
MMP_RS06760 +0.2 0.8 hypothetical protein compare
MMP_RS06680 +0.2 1.5 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS06050 +0.2 1.0 ZIP family metal transporter compare
MMP_RS06225 +0.2 1.0 DNA double-strand break repair nuclease NurA compare
MMP_RS07615 +0.2 1.0 energy-coupling factor ABC transporter permease compare
MMP_RS03160 +0.2 1.6 class III signal peptide-containing protein compare
MMP_RS06585 +0.2 0.5 DMT family protein compare
MMP_RS05470 +0.2 1.6 DUF523 and DUF1722 domain-containing protein compare
MMP_RS02645 +0.2 1.3 ArsR family transcriptional regulator compare
MMP_RS04800 +0.2 1.3 chemotaxis protein CheW compare
MMP_RS08070 +0.2 0.9 DUF2096 domain-containing protein compare
MMP_RS01320 +0.2 0.7 hypothetical protein compare
MMP_RS01865 +0.2 0.4 GPR1/FUN34/YaaH family transporter compare
MMP_RS07910 +0.2 0.9 NAD(P)H-hydrate dehydratase compare
MMP_RS01090 +0.2 1.1 ABC transporter substrate-binding protein compare
MMP_RS08430 +0.2 1.1 HAD family hydrolase compare
MMP_RS00635 +0.2 0.7 energy-coupling factor transporter transmembrane protein EcfT compare
MMP_RS03425 +0.2 1.1 hypothetical protein compare
MMP_RS03740 +0.2 1.0 indolepyruvate oxidoreductase subunit beta compare
MMP_RS08665 +0.2 1.5 hypothetical protein compare
MMP_RS02360 +0.2 0.8 hypothetical protein compare
MMP_RS02450 +0.2 0.9 hypothetical protein compare
MMP_RS02770 +0.2 0.8 hypothetical protein compare
MMP_RS02740 +0.2 0.6 hypothetical protein compare
MMP_RS01855 +0.2 0.9 2-hydroxyacyl-CoA dehydratase family protein compare
MMP_RS07425 +0.2 0.8 GTP-binding protein compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source L-Histidine in Methanococcus maripaludis S2

For nitrogen source L-Histidine across organisms