Experiment set7IT089 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM L-Histidine

200 most important genes:

  gene name fitness t score description  
MMP_RS03450 -6.4 -3.9 glycine synthesis protein GlyXS (from data) compare
MMP_RS06355 -6.0 -4.8 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS03315 -5.5 -2.4 ferrous iron transport protein A compare
MMP_RS08720 -5.5 -2.8 4Fe-4S binding protein compare
MMP_RS07845 -5.5 -3.6 LL-diaminopimelate aminotransferase compare
MMP_RS04455 -5.4 -23.2 nitrogenase subunit alpha compare
MMP_RS00555 -5.3 -10.3 MFS transporter compare
MMP_RS04450 -5.3 -13.5 P-II family nitrogen regulator compare
MMP_RS04445 -5.2 -12.5 P-II family nitrogen regulator compare
MMP_RS08165 -5.2 -4.5 phosphoglycerate dehydrogenase compare
MMP_RS04460 -5.1 -23.9 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS04465 -5.0 -19.4 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS04440 -5.0 -17.0 nitrogenase iron protein compare
MMP_RS04470 -4.6 -18.7 nitrogenase compare
MMP_RS06350 -4.6 -8.1 HesA/MoeB/ThiF family protein compare
MMP_RS05515 -4.5 -11.8 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS01175 -4.4 -7.8 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS00455 -4.3 -9.8 orotate phosphoribosyltransferase-like protein compare
MMP_RS07345 -4.3 -9.8 glycine synthesis protein GlyXL (from data) compare
MMP_RS00750 -4.1 -4.2 fumarate hydratase compare
MMP_RS06475 -4.1 -7.2 FAD-dependent oxidoreductase compare
MMP_RS07635 -4.1 -11.9 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS07525 -4.1 -8.6 4Fe-4S binding protein compare
MMP_RS05500 -3.9 -12.7 2-isopropylmalate synthase compare
MMP_RS03015 -3.8 -11.4 GTP 3' 8-cyclase MoaA compare
MMP_RS07185 -3.7 -16.4 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS04605 -3.7 -7.0 cobalt ECF transporter T component CbiQ compare
MMP_RS01500 -3.7 -3.2 CBS domain-containing protein compare
MMP_RS02355 -3.7 -3.6 30S ribosomal protein S27ae compare
MMP_RS05265 -3.6 -4.4 2-isopropylmalate synthase compare
MMP_RS06400 -3.6 -2.8 4Fe-4S binding protein compare
MMP_RS06625 -3.4 -3.9 DNA primase compare
MMP_RS00040 -3.4 -5.1 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS02010 -3.4 -11.7 PHP domain-containing protein compare
MMP_RS08440 -3.4 -4.0 cell division protein SepF compare
MMP_RS04615 -3.3 -6.6 PDGLE domain-containing protein compare
MMP_RS01225 -3.3 -8.0 DUF5379 domain-containing protein compare
MMP_RS08715 -3.3 -3.4 formylmethanofuran dehydrogenase subunit B compare
MMP_RS06395 -3.3 -6.7 ThiF family adenylyltransferase compare
MMP_RS04710 -3.2 -2.5 hypothetical protein compare
MMP_RS01005 -3.2 -2.4 riboflavin synthase compare
MMP_RS03435 -3.2 -2.7 ketol-acid reductoisomerase compare
MMP_RS07730 -3.1 -3.1 pyruvate synthase subunit beta compare
MMP_RS06730 -3.1 -2.8 phosphopantothenate/pantothenate synthetase compare
MMP_RS06270 -3.1 -5.5 TIGR00300 family protein compare
MMP_RS03600 -3.0 -3.1 triose-phosphate isomerase compare
MMP_RS07605 -3.0 -5.4 diadenylate cyclase compare
MMP_RS04090 -3.0 -4.9 hypothetical protein compare
MMP_RS05250 -2.9 -3.1 NFYB/HAP3 family transcription factor subunit compare
MMP_RS04215 -2.9 -5.4 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS07380 -2.9 -3.8 transcription elongation factor Spt5 compare
MMP_RS07445 -2.9 -6.5 helix-turn-helix domain-containing protein compare
MMP_RS06285 -2.9 -3.7 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS01545 -2.9 -1.9 CBS domain-containing protein compare
MMP_RS02145 -2.9 -11.8 winged helix-turn-helix transcriptional regulator compare
MMP_RS02345 -2.8 -5.0 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS06315 -2.8 -1.4 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS04620 -2.8 -11.7 cobalt transporter CbiM compare
MMP_RS04900 -2.7 -21.5 hypothetical protein compare
MMP_RS02240 -2.7 -5.9 methanogenesis marker 7 protein compare
MMP_RS03700 -2.7 -9.9 sodium:proton antiporter compare
MMP_RS08790 -2.7 -4.1 translation initiation factor IF-2 subunit alpha compare
MMP_RS03640 -2.7 -6.1 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS09020 -2.7 -3.2 hypothetical protein compare
MMP_RS00735 -2.6 -4.7 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS01190 -2.6 -9.7 cadmium-translocating P-type ATPase compare
MMP_RS07005 -2.6 -1.1 4Fe-4S binding protein compare
MMP_RS05920 -2.6 -0.6 50S ribosomal protein L37e compare
MMP_RS01800 -2.6 -5.5 TIGR00303 family protein compare
MMP_RS01455 -2.5 -5.2 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS07600 -2.5 -3.6 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS06725 -2.5 -11.7 hypothetical protein compare
MMP_RS07075 -2.5 -5.6 phosphomannomutase/phosphoglucomutase compare
MMP_RS07700 -2.5 -12.9 DUF1188 domain-containing protein compare
MMP_RS01265 -2.5 -2.8 hypothetical protein compare
MMP_RS05430 -2.5 -4.9 TIGR00288 family NYN domain-containing protein compare
MMP_RS07695 -2.5 -13.7 DUF3236 domain-containing protein compare
MMP_RS01795 -2.5 -3.0 methanogenesis marker 6 protein compare
MMP_RS05925 -2.5 -5.7 small nuclear ribonucleoprotein compare
MMP_RS01955 -2.5 -5.3 hypothetical protein compare
MMP_RS03025 -2.4 -7.3 molybdenum cofactor guanylyltransferase compare
MMP_RS04850 -2.4 -16.7 UPF0254 family protein compare
MMP_RS01445 -2.4 -8.8 hypothetical protein compare
MMP_RS01900 -2.4 -16.0 hypothetical protein compare
MMP_RS00730 -2.4 -8.4 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS07200 -2.4 -10.0 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS00725 -2.3 -7.3 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS08320 -2.3 -5.8 molybdopterin molybdotransferase MoeA compare
MMP_RS03110 -2.3 -6.3 glycosyltransferase family 2 protein compare
MMP_RS06840 -2.3 -1.7 DNA-directed RNA polymerase subunit N compare
MMP_RS06020 -2.3 -7.7 archaeoflavoprotein AfpA compare
MMP_RS02340 -2.3 -3.0 DNA-directed RNA polymerase subunit E'' compare
MMP_RS07435 -2.3 -3.2 GMP synthase subunit A compare
MMP_RS01890 -2.2 -4.5 nucleotide sugar dehydrogenase compare
MMP_RS03205 -2.2 -2.9 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS02245 -2.2 -4.6 hypothetical protein compare
MMP_RS08195 -2.2 -9.8 hypothetical protein compare
MMP_RS01830 -2.2 -2.2 tRNA-Val compare
MMP_RS01885 -2.2 -9.3 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS06120 -2.2 -3.4 UPF0147 family protein compare
MMP_RS01880 -2.1 -7.8 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS05550 -2.1 -1.3 cation:proton antiporter compare
MMP_RS08650 -2.1 -4.9 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS02165 -2.1 -9.1 tRNA-dihydrouridine synthase compare
MMP_RS07955 -2.1 -4.9 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS06105 -2.1 -10.0 hydrogenase maturation peptidase HycI compare
MMP_RS03035 -2.1 -4.2 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS04585 -2.1 -13.0 AIR synthase related protein compare
MMP_RS01380 -2.1 -5.9 PHP domain-containing protein compare
MMP_RS01020 -2.1 -1.8 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS08645 -2.0 -8.7 UPF0179 family protein compare
MMP_RS04685 -2.0 -4.2 DUF126 domain-containing protein compare
MMP_RS06295 -2.0 -10.0 methanogenesis marker 14 protein compare
MMP_RS07390 -2.0 -3.7 cell division protein FtsZ compare
MMP_RS01875 -2.0 -10.9 N-acetyltransferase compare
MMP_RS05640 -2.0 -8.4 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS01925 -2.0 -10.3 DUF1616 domain-containing protein compare
MMP_RS03250 -2.0 -3.3 MJ1244 family protein compare
MMP_RS07630 -2.0 -1.9 ATP-binding cassette domain-containing protein compare
MMP_RS01755 -2.0 -2.5 DUF2097 domain-containing protein compare
MMP_RS08635 -1.9 -2.9 UbiA family prenyltransferase compare
MMP_RS00685 -1.9 -5.0 2-phospho-L-lactate guanylyltransferase compare
MMP_RS06375 -1.9 -3.5 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS02685 -1.9 -9.6 molybdate ABC transporter substrate-binding protein compare
MMP_RS05535 -1.9 -4.6 hypothetical protein compare
MMP_RS01610 -1.9 -5.2 hypothetical protein compare
MMP_RS03580 -1.9 -3.3 signal recognition particle-docking protein FtsY compare
MMP_RS04890 -1.9 -1.2 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS07735 -1.9 -1.5 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS01725 -1.9 -4.4 class I SAM-dependent methyltransferase family protein compare
MMP_RS07575 -1.9 -3.5 RNA ligase partner protein compare
MMP_RS07535 -1.8 -7.8 4Fe-4S binding protein compare
MMP_RS06670 -1.8 -5.1 glucose-6-phosphate isomerase compare
MMP_RS01905 -1.8 -13.2 glycosyltransferase compare
MMP_RS00915 -1.8 -6.8 DUF116 domain-containing protein compare
MMP_RS06175 -1.8 -7.0 winged helix-turn-helix transcriptional regulator compare
MMP_RS06230 -1.8 -3.0 helix-turn-helix domain-containing protein compare
MMP_RS06340 -1.8 -5.9 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS06895 -1.8 -1.3 selenocysteine-specific translation elongation factor compare
MMP_RS08500 -1.8 -6.5 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS08435 -1.7 -2.2 Era-like GTP-binding protein compare
MMP_RS05460 -1.7 -9.9 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS05930 -1.7 -2.5 3-isopropylmalate dehydratase large subunit compare
MMP_RS08300 -1.7 -1.6 metal-sulfur cluster assembly factor compare
MMP_RS04955 -1.7 -5.8 DNA topoisomerase I compare
MMP_RS00310 -1.7 -7.8 CBS domain-containing protein compare
MMP_RS06855 -1.7 -8.9 hypothetical protein compare
MMP_RS04870 -1.7 -5.5 TIGR02253 family HAD-type hydrolase compare
MMP_RS03445 -1.7 -1.4 methanogenesis marker 17 protein compare
MMP_RS01915 -1.7 -12.1 DUF354 domain-containing protein compare
MMP_RS08745 -1.7 -6.6 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS07710 -1.7 -7.2 cell division protein FtsZ compare
MMP_RS04790 -1.7 -8.8 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS02675 -1.6 -3.4 hypothetical protein compare
MMP_RS06975 -1.6 -2.8 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS00895 -1.6 -3.4 hypothetical protein compare
MMP_RS08155 -1.6 -7.2 hypothetical protein compare
MMP_RS00985 -1.5 -5.3 CDC48 family AAA ATPase compare
MMP_RS01960 -1.5 -1.5 hypothetical protein compare
MMP_RS00315 -1.5 -6.3 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS00810 -1.5 -6.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS06940 -1.5 -3.6 polyprenyl diphosphate synthase compare
MMP_RS06130 -1.5 -4.3 peptidylprolyl isomerase compare
MMP_RS01665 -1.5 -3.5 DUF2111 domain-containing protein compare
MMP_RS07355 -1.5 -1.3 transcription factor S compare
MMP_RS02680 -1.5 -4.9 ABC transporter permease compare
MMP_RS07365 -1.5 -8.6 2-phosphoglycerate kinase compare
MMP_RS02175 -1.5 -1.1 DUF1611 domain-containing protein compare
MMP_RS02780 -1.4 -6.2 hypothetical protein compare
MMP_RS05345 -1.4 -5.8 hypothetical protein compare
MMP_RS00720 -1.4 -6.2 metal-dependent hydrolase compare
MMP_RS01195 -1.4 -1.7 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS03485 -1.4 -4.1 TIGR00267 family protein compare
MMP_RS01975 -1.4 -10.3 hypothetical protein compare
MMP_RS03145 -1.4 -6.6 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS05440 -1.4 -8.6 winged helix-turn-helix transcriptional regulator compare
MMP_RS01970 -1.4 -9.9 TIGR04279 domain-containing protein compare
MMP_RS00695 -1.4 -1.3 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS02730 -1.3 -8.3 ModD protein compare
MMP_RS01910 -1.3 -9.7 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS06630 -1.3 -1.0 UPF0058 family protein compare
MMP_RS08210 -1.3 -2.4 phosphatidylglycerophosphatase A compare
MMP_RS07705 -1.3 -6.3 transcriptional regulator compare
MMP_RS07755 -1.3 -1.6 DUF555 domain-containing protein compare
MMP_RS03475 -1.3 -1.0 hypothetical protein compare
MMP_RS07090 -1.3 -7.1 tRNA (adenine-N1)-methyltransferase compare
MMP_RS07420 -1.3 -5.5 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS05280 -1.3 -6.4 COG1361 S-layer family protein compare
MMP_RS01700 -1.3 -1.0 dihydroxy-acid dehydratase compare
MMP_RS04780 -1.3 -3.4 ribonuclease P compare
MMP_RS04720 -1.3 -2.4 DedA family protein compare
MMP_RS02885 -1.3 -7.7 molybdopterin biosynthesis protein compare
MMP_RS01325 -1.2 -2.1 dihydroneopterin aldolase family protein compare
MMP_RS00060 -1.2 -2.2 3-dehydroquinate synthase II compare
MMP_RS05845 -1.2 -2.0 tRNA-intron lyase compare
MMP_RS03140 -1.2 -7.2 hypothetical protein compare
MMP_RS01440 -1.2 -5.6 NAAT family transporter compare
MMP_RS02670 -1.2 -6.1 ATP-binding cassette domain-containing protein compare
MMP_RS07410 -1.2 -6.8 4-demethylwyosine synthase TYW1 compare
MMP_RS05295 -1.2 -7.8 minichromosome maintenance protein MCM compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source L-Histidine in Methanococcus maripaludis S2

For nitrogen source L-Histidine across organisms