Experiment set7IT088 for Marinobacter adhaerens HP15

Compare to:

marine broth with Dimethyl Sulfoxide 9 vol%

200 most detrimental genes:

  gene name fitness t score description  
HP15_1534 +1.3 2.4 cell division protein ZipA-like protein compare
HP15_1655 +1.0 1.9 transcriptional regulator, TetR family compare
HP15_1539 +0.8 2.9 CBS domain containing protein compare
HP15_3534 +0.8 0.8 conserved hypothetical protein, membrane compare
HP15_1658 +0.7 1.4 glutaredoxin-like protein compare
HP15_3351 +0.7 1.8 hypoxanthine-guanine phosphoribosyltransferase compare
HP15_2509 +0.7 1.8 hypothetical protein compare
HP15_2408 +0.7 2.1 methylation site containing protein compare
HP15_337 +0.7 0.9 hypothetical protein compare
HP15_421 +0.7 3.1 MSHA pilin protein MshD compare
HP15_1936 +0.6 1.4 conserved hypothetical protein compare
HP15_3256 +0.6 1.4 phospho-2-dehydro-3-heoxyheptonate aldolase compare
HP15_1467 +0.6 1.2 fFlagellar basal-body rod protein FlgB compare
HP15_1606 +0.6 2.0 general secretion pathway protein I-like protein compare
HP15_3887 +0.6 1.7 biopolymer transport protein ExbD/TolR compare
HP15_3105 +0.5 0.9 conserved hypothetical protein compare
HP15_2472 +0.5 2.0 hypothetical protein compare
HP15_2858 +0.5 1.7 hypothetical protein compare
HP15_1735 +0.5 1.3 ABC transporter, permease protein compare
HP15_1637 +0.5 2.3 methyl-accepting chemotaxis sensory transducer compare
HP15_1617 +0.5 1.7 hypothetical protein compare
HP15_3087 +0.5 1.5 protein belonging to uncharacterized protein family UPF0125 compare
HP15_590 +0.5 2.0 haloalkane dehalogenase compare
HP15_3189 +0.5 3.3 conserved hypothetical protein compare
HP15_852 +0.5 1.3 MaoC-like dehydratase compare
HP15_1940 +0.5 1.2 conserved hypothetical protein compare
HP15_676 +0.5 2.7 N-acetylmuramoyl-L-alanine amidase compare
HP15_3634 +0.5 0.7 hypothetical protein compare
HP15_2330 +0.5 4.0 two component, sigma54 specific, transcriptional regulator, Fis family compare
HP15_3806 +0.5 1.2 conserved hypothetical protein compare
HP15_3859 +0.5 2.3 conserved hypothetical protein compare
HP15_1363 +0.5 1.0 histidinol-phosphate aminotransferase compare
HP15_3971 +0.5 3.0 GtrA family protein compare
HP15_2749 +0.5 2.5 membrane protein containing DUF6, transmembrane compare
HP15_1928 +0.5 3.1 2-methylcitrate dehydratase PrpD compare
HP15_1336 +0.5 1.3 pterin-4-alpha-carbinolamine dehydratase compare
HP15_2825 +0.5 1.5 conserved hypothetical protein compare
HP15_2321 +0.5 1.4 anti-sigma-factor antagonist compare
HP15_3805 +0.5 2.3 conserved hypothetical protein compare
HP15_1789 +0.5 1.5 conserved hypothetical protein compare
HP15_1284 +0.5 2.3 conserved hypothetical protein, secreted compare
HP15_1137 +0.5 2.5 helix-turn-helix domain containing protein, AraC type compare
HP15_2313 +0.5 2.6 flagellar biosynthesis protein, FliO compare
HP15_3752 +0.4 2.0 flagellar motor protein MotB compare
HP15_950 +0.4 1.2 RNA polymerase, sigma-24 subunit, ECF subfamily compare
HP15_p187g15 +0.4 1.5 serine phosphatase RsbU-like protein, regulator of sigma compare
HP15_p42g21 +0.4 1.3 oriT binding protein TraJ compare
HP15_1900 +0.4 1.9 dTDP-4-dehydrorhamnose 3,5-epimerase compare
HP15_2244 +0.4 1.8 glycerophosphoryl diester phosphodiesterase compare
HP15_3382 +0.4 1.2 YbaK/prolyl-tRNA synthetase associated region compare
HP15_675 +0.4 2.4 conserved hypothetical protein compare
HP15_2005 +0.4 1.3 hypothetical protein compare
HP15_1626 +0.4 0.7 conserved hypothetical protein compare
HP15_1973 +0.4 1.2 hypothetical protein compare
HP15_2443 +0.4 1.1 sigma 54 modulation protein/ribosomal protein S30EA compare
HP15_2426 +0.4 2.5 NGG1p interacting factor 3, NIF3 compare
HP15_1640 +0.4 2.0 transcriptional regulator, LysR family protein compare
HP15_1433 +0.4 1.4 conserved hypothetical protein, secreted compare
HP15_1431 +0.4 0.9 zinc finger, C4 DksA/TraR-type compare
HP15_1961 +0.4 1.6 hypothetical protein compare
HP15_188 +0.4 1.8 plasmid pTOM9 ORF1-like protein compare
HP15_144 +0.4 0.7 conserved hypothetical protein compare
HP15_851 +0.4 1.4 integral membrane protein-like protein compare
HP15_1678 +0.4 1.0 FMN reductase, NADPH-dependent compare
HP15_2906 +0.4 0.7 conserved hypothetical protein compare
HP15_522 +0.4 1.3 type IV pilus biogenesis protein-like protein compare
HP15_788 +0.4 3.2 multi-sensor hybrid histidine kinase compare
HP15_4130 +0.4 1.1 molybdopterin-guanine dinucleotide biosynthesis protein A compare
HP15_678 +0.4 2.2 conserved hypothetical protein compare
HP15_2331 +0.4 2.3 SOS cell division inhibitor compare
HP15_2781 +0.4 0.9 hypothetical protein compare
HP15_423 +0.4 1.8 conserved hypothetical protein compare
HP15_1963 +0.4 1.7 conserved hypothetical protein compare
HP15_1469 +0.4 2.2 flagellar hook capping protein compare
HP15_2491 +0.4 0.7 kinase compare
HP15_2028 +0.4 1.8 protein containing alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen domain compare
HP15_2528 +0.4 1.1 hypothetical protein compare
HP15_1546 +0.4 2.6 flagella basal body P-ring formation protein FlgA compare
HP15_1016 +0.4 0.9 acetolactate synthase II, small subunit-like protein compare
HP15_1567 +0.4 1.7 two component transcriptional regulator, LuxR family compare
HP15_74 +0.4 2.2 hypothetical protein compare
HP15_356 +0.4 0.4 anhydro-N-acetylmuramic acid kinase compare
HP15_1895 +0.4 0.7 secreted protein containing PEP-CTERM bacterial domain compare
HP15_1692 +0.4 2.0 luciferase family protein compare
HP15_p42g43 +0.4 1.1 TrbK entry exclusion protein-like protein compare
HP15_3210 +0.4 0.8 cell division protein ZapA-like protein compare
HP15_2103 +0.4 1.3 antibiotic biosynthesis monooxygenase compare
HP15_1114 +0.4 2.3 acetaldehyde dehydrogenase compare
HP15_1501 +0.4 0.9 hypothetical protein compare
HP15_1021 +0.4 1.4 tRNA pseudouridine synthase C compare
HP15_p187g143 +0.4 1.8 hypothetical protein compare
HP15_2833 +0.4 1.4 conserved hypothetical protein compare
HP15_649 +0.4 2.1 phage tail protein X compare
HP15_679 +0.4 0.7 conserved hypothetical protein compare
HP15_666 +0.3 2.0 conserved hypothetical protein compare
HP15_2951 +0.3 1.8 membrane protein containing DUF454 compare
HP15_1156 +0.3 1.3 conserved hypothetical protein compare
HP15_281 +0.3 1.3 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family compare
HP15_524 +0.3 2.4 signal transduction histidine kinase, nitrogen specific, NtrB compare
HP15_1794 +0.3 0.6 secreted protein compare
HP15_998 +0.3 1.6 conserved hypothetical protein compare
HP15_2317 +0.3 2.5 flagellar hook-length control protein compare
HP15_1974 +0.3 1.0 hypothetical protein compare
HP15_2123 +0.3 2.0 peptidase C39, bacteriocin processing compare
HP15_693 +0.3 1.2 hypothetical protein compare
HP15_2357 +0.3 1.6 conserved hypothetical protein compare
HP15_1769 +0.3 1.4 transcriptional regulator-related protein compare
HP15_1544 +0.3 1.9 flagella synthesis protein FlgN compare
HP15_1588 +0.3 0.8 HhH-GPD family protein compare
HP15_614 +0.3 1.2 protein containing glutaredoxin domain compare
HP15_3831 +0.3 2.1 transcriptional regulator, TetR family protein compare
HP15_p187g5 +0.3 1.6 hypothetical protein compare
HP15_2612 +0.3 1.1 lipoprotein compare
HP15_1403 +0.3 2.2 aspartate racemase compare
HP15_1677 +0.3 1.4 transcriptional regulator, LysR family protein compare
HP15_2017 +0.3 2.1 branched-chain amino acid ABC transporter ATP-binding protein compare
HP15_3897 +0.3 2.5 conserved hypothetical protein compare
HP15_536 +0.3 1.1 ferric reductase domain protein protein transmembrane component, N-terminal domain protein compare
HP15_975 +0.3 1.0 hypothetical protein compare
HP15_2311 +0.3 1.2 flagellar biosynthetic protein FliQ compare
HP15_1191 +0.3 1.7 metallo-beta-lactamase family protein compare
HP15_2493 +0.3 1.2 methyltransferase compare
HP15_1476 +0.3 2.6 flagellar hook-associated protein FlgK compare
HP15_p187g17 +0.3 1.7 conserved hypothetical protein compare
HP15_2928 +0.3 2.2 signal transduction protein compare
HP15_2878 +0.3 1.2 urea ABC transporter, ATP-binding protein UrtD compare
HP15_2798 +0.3 2.2 protein containing cupin 2, conserved barrel domain compare
HP15_292 +0.3 1.3 conserved hypothetical protein compare
HP15_747 +0.3 2.0 integral membrane sensor signal transduction histidine kinase compare
HP15_3520 +0.3 0.5 protein containing CheW-like domain compare
HP15_2615 +0.3 1.4 two component transcriptional regulator, winged helix family compare
HP15_3098 +0.3 1.9 membrane protein compare
HP15_1875 +0.3 1.6 conserved hypothetical protein compare
HP15_1468 +0.3 2.2 flagellar basal-body rod protein FlgC-like protein compare
HP15_2018 +0.3 2.0 branched-chain amino acid ABC transporter, ATP-binding protein compare
HP15_2329 +0.3 2.0 two-component sensor compare
HP15_4147 +0.3 1.6 hypothetical protein compare
HP15_2922 +0.3 0.5 hypothetical protein compare
HP15_1384 +0.3 1.1 lipolytic enzyme, G-D-S-L compare
HP15_117 +0.3 1.2 conserved hypothetical protein, secreted compare
HP15_p42g22 +0.3 1.7 TraI DNA relaxase compare
HP15_4180 +0.3 1.0 enoyl-CoA hydratase/isomerase compare
HP15_465 +0.3 1.2 heat shock protein HslVU, ATPase subunit HslU compare
HP15_341 +0.3 0.9 hypothetical protein compare
HP15_1471 +0.3 2.2 flagellar basal-body rod FlgF compare
HP15_4075 +0.3 1.2 TRAP dicarboxylate transporter, DctQ subunit compare
HP15_1470 +0.3 2.4 flagellar hook protein FlgE compare
HP15_2309 +0.3 2.5 flagellar biosynthesis protein FlhB compare
HP15_2411 +0.3 1.5 type IV pilus prepilin peptidase PilD compare
HP15_tRNA50 +0.3 0.8 tRNA-Pro compare
HP15_2310 +0.3 1.7 flagellar biosynthesis protein FliR compare
HP15_1568 +0.3 1.4 excinuclease ABC subunit C compare
HP15_3515 +0.3 0.9 chemotaxis signal transduction protein compare
HP15_p187g89 +0.3 0.9 hypothetical protein compare
HP15_550 +0.3 1.3 phosphoheptose isomerase compare
HP15_p187g20 +0.3 1.4 hypothetical protein compare
HP15_420 +0.3 0.6 type II secretory pathway, pseudopilin PulG compare
HP15_3225 +0.3 2.2 tRNA-dihydrouridine synthase B compare
HP15_3603 +0.3 1.6 transcriptional regulator, HxlR family compare
HP15_3267 +0.3 1.7 lipase precursor compare
HP15_164 +0.3 1.1 conserved hypothetical protein compare
HP15_735 +0.3 1.6 type III effector HopPmaJ compare
HP15_2969 +0.3 1.1 transcriptional regulator, MerR family compare
HP15_2935 +0.3 2.2 SpoVR family protein compare
HP15_3128 +0.3 1.2 methionine sulfoxide reductase A compare
HP15_2706 +0.3 2.0 inner-membrane translocator compare
HP15_233 +0.3 2.1 molybdenum cofactor biosynthesis protein B-like protein compare
HP15_2132 +0.3 1.8 polyhydroxyalkanoic acid synthase compare
HP15_824 +0.3 1.3 phosphoglycerate mutase family protein compare
HP15_2403 +0.3 1.8 lipopolysaccharide biosynthesis compare
HP15_1293 +0.3 1.5 iron sulfur binding protein compare
HP15_3595 +0.3 1.8 uncharacterized conserved protein UCP012641 compare
HP15_3866 +0.3 2.0 metal dependent phosphohydrolase compare
HP15_p42g31 +0.3 1.1 conserved hypothetical protein, secreted compare
HP15_3384 +0.3 1.3 HIT (histidine triad) family protein compare
HP15_2773 +0.3 1.3 conserved hypothetical protein, membrane compare
HP15_498 +0.3 1.6 thiolase-like protein compare
HP15_2757 +0.3 1.3 conserved hypothetical protein compare
HP15_1303 +0.3 1.8 chromosome partitioning protein, ParA family compare
HP15_523 +0.3 2.2 two component, sigma54 specific, transcriptional regulator, Fis family compare
HP15_4010 +0.3 1.2 flagellar motor protein PomA compare
HP15_937 +0.3 1.7 spermidine/putrescine ABC transporter, permease protein compare
HP15_958 +0.3 1.4 small multidrug resistance protein compare
HP15_976 +0.3 1.9 acetyltransferase, GNAT family protein-like protein compare
HP15_2328 +0.3 1.7 two component, sigma54 specific, transcriptional regulator, Fis family compare
HP15_2326 +0.3 1.9 flagellar MS-ring protein compare
HP15_1774 +0.3 0.8 conserved hypothetical protein, membrane compare
HP15_1020 +0.3 1.7 methyl-accepting chemotaxis sensory transducer compare
HP15_1559 +0.3 1.0 auxin efflux carrier compare
HP15_3667 +0.3 1.3 membrane or secreted protein compare
HP15_828 +0.3 1.5 conserved hypothetical protein compare
HP15_1981 +0.3 0.9 conserved hypothetical protein compare
HP15_p187g1 +0.3 0.6 repeat-containing protein compare
HP15_p187g129 +0.3 1.1 hypothetical protein compare
HP15_3317 +0.3 0.5 acetylglutamate kinase compare
HP15_3641 +0.3 0.8 hypothetical protein compare
HP15_829 +0.3 0.9 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase compare
HP15_3430 +0.3 1.8 integral membrane sensor signal transduction histidine kinase compare
HP15_3563 +0.3 1.4 transcriptional regulator, LysR family protein compare
HP15_2081 +0.3 1.2 ATP-dependent Clp protease adaptor protein ClpS compare


Specific Phenotypes

None in this experiment

For Marinobacter adhaerens HP15 in stress experiments

For stress Dimethyl Sulfoxide across organisms