| | gene | name | fitness | t score | description | |
|---|
| Rru_A2772 | | -3.6 | -4.2 | ATP phosphoribosyltransferase (NCBI) | compare |
| Rru_A1620 | | -3.2 | -4.2 | hypothetical protein (NCBI) | compare |
| Rru_A2771 | | -2.4 | -5.4 | Histidinol dehydrogenase (NCBI) | compare |
| Rru_A1239 | | -2.2 | -4.4 | Glutamate 5-kinase, ProB-related (NCBI) | compare |
| Rru_A3594 | | -2.2 | -5.0 | Histidine biosynthesis protein HisF (NCBI) | compare |
| Rru_A1105 | | -2.1 | -7.1 | tRNA synthetase, class II (G, H, P and S) (NCBI) | compare |
| Rru_A0058 | | -2.1 | -2.9 | Dihydrokaempferol 4-reductase (NCBI) | compare |
| Rru_A3264 | | -2.0 | -8.4 | Histidinol-phosphate aminotransferase (NCBI) | compare |
| Rru_A3748 | | -1.8 | -5.6 | hypothetical protein (NCBI) | compare |
| Rru_A1841 | | -1.8 | -2.0 | Flavin reductase-like, FMN-binding (NCBI) | compare |
| Rru_A1435 | | -1.7 | -5.0 | Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) | compare |
| Rru_A1827 | | -1.7 | -6.7 | Glycine hydroxymethyltransferase (NCBI) | compare |
| Rru_A2869 | | -1.6 | -1.5 | Exopolysaccharide synthesis, ExoD (NCBI) | compare |
| Rru_A0574 | | -1.5 | -3.6 | Carboxylyase-related protein (NCBI) | compare |
| Rru_A1767 | | -1.4 | -2.5 | peptidase M23B (NCBI) | compare |
| Rru_A0670 | | -1.3 | -2.6 | Cobalbumin biosynthesis enzyme (NCBI) | compare |
| Rru_A2609 | | -1.3 | -1.6 | hypothetical protein (NCBI) | compare |
| Rru_A0596 | | -1.3 | -2.8 | Fructose-bisphosphate aldolase, class II, Calvin cycle subtype (NCBI) | compare |
| Rru_A3533 | | -1.3 | -9.2 | hypothetical protein (NCBI) | compare |
| Rru_A2100 | | -1.3 | -8.0 | Protein of unknown function DUF81 (NCBI) | compare |
| Rru_A2497 | | -1.3 | -6.5 | Peptide chain release factor 3 (NCBI) | compare |
| Rru_A0484 | | -1.3 | -3.8 | hypothetical protein (NCBI) | compare |
| Rru_A2987 | | -1.3 | -4.7 | hypothetical protein (NCBI) | compare |
| Rru_A0155 | | -1.2 | -2.6 | Transcriptional Regulator, TetR family (NCBI) | compare |
| Rru_A3801 | | -1.2 | -2.6 | Enoyl-CoA hydratase/isomerase (NCBI) | compare |
| Rru_A2163 | | -1.2 | -1.8 | conserved hypothetical protein RP631 (NCBI) | compare |
| Rru_A2574 | | -1.2 | -1.9 | Transcriptional Regulator, BadM/Rrf2 family (NCBI) | compare |
| Rru_A0668 | | -1.2 | -2.6 | Cobalamin-5-phosphate synthase CobS (NCBI) | compare |
| Rru_A0010 | | -1.2 | -3.7 | Sigma-54 (RpoN) (NCBI) | compare |
| Rru_A1437 | | -1.1 | -4.8 | Sodium:dicarboxylate symporter (NCBI) | compare |
| Rru_A3642 | | -1.1 | -2.9 | Negative regulator of class I heat shock protein (NCBI) | compare |
| Rru_A0412 | | -1.1 | -1.7 | hypothetical protein (NCBI) | compare |
| Rru_A3190 | | -1.1 | -1.9 | Aspartate carbamoyltransferase (NCBI) | compare |
| Rru_A0150 | | -1.1 | -1.8 | hypothetical protein (NCBI) | compare |
| Rru_A3165 | | -1.1 | -3.6 | Histidinol-phosphate phosphatase, putative, inositol monophosphatase (NCBI) | compare |
| Rru_A0206 | | -1.1 | -2.5 | Cobalt chelatase, pCobS small subunit (NCBI) | compare |
| Rru_A3341 | | -1.1 | -2.1 | Acetylglutamate kinase (NCBI) | compare |
| Rru_A1527 | | -1.0 | -4.2 | ABC transporter component (NCBI) | compare |
| Rru_A2992 | | -1.0 | -2.3 | Precorrin-6Y C5,15-methyltransferase (decarboxylating) (NCBI) | compare |
| Rru_A0399 | | -1.0 | -3.0 | Phosphoesterase, PA-phosphatase related (NCBI) | compare |
| Rru_A3547 | | -1.0 | -4.1 | hypothetical protein (NCBI) | compare |
| Rru_A3202 | | -1.0 | -4.3 | DNA topoisomerase (NCBI) | compare |
| Rru_A2008 | | -1.0 | -6.3 | Thiamine biosynthesis protein ThiC (NCBI) | compare |
| Rru_A2167 | | -1.0 | -3.0 | Phosphoribosylformylglycinamidine cyclo-ligase (NCBI) | compare |
| Rru_A3766 | | -0.9 | -5.2 | Transcriptional Regulator, MucR family (NCBI) | compare |
| Rru_A2478 | | -0.9 | -5.2 | ArgK protein (NCBI) | compare |
| Rru_A0073 | | -0.9 | -4.3 | ribosomal subunit interface protein, putative (NCBI) | compare |
| Rru_A2512 | | -0.9 | -3.7 | 3-oxoacyl-(acyl-carrier-protein) reductase (NCBI) | compare |
| Rru_A2986 | | -0.9 | -4.3 | Fumarate reductase/succinate dehydrogenase flavoprotein-like (NCBI) | compare |
| Rru_A3773 | | -0.9 | -2.5 | CBS domain protein (NCBI) | compare |
| Rru_A0671 | | -0.9 | -4.8 | cobalamin synthesis CobW protein (NCBI) | compare |
| Rru_A2038 | | -0.9 | -5.6 | Glutamate-ammonia-ligase adenylyltransferase (NCBI) | compare |
| Rru_A0118 | | -0.9 | -1.6 | type II secretion system protein E (NCBI) | compare |
| Rru_A2887 | | -0.9 | -2.3 | GreA/GreB family elongation factor (NCBI) | compare |
| Rru_A3329 | | -0.9 | -2.3 | hypothetical protein (NCBI) | compare |
| Rru_A2847 | | -0.9 | -2.0 | Transcriptional regulators, TraR/DksA family (NCBI) | compare |
| Rru_A1111 | | -0.8 | -5.9 | Pseudouridine synthase, RluD (NCBI) | compare |
| Rru_A3010 | | -0.8 | -3.8 | Transcriptional Regulator, DeoR family (NCBI) | compare |
| Rru_A0712 | | -0.8 | -1.0 | Transcriptional Regulator, XRE family (NCBI) | compare |
| Rru_A1019 | | -0.8 | -2.7 | FAD dependent oxidoreductase (NCBI) | compare |
| Rru_A3626 | | -0.8 | -1.6 | Glucose inhibited division protein (NCBI) | compare |
| Rru_A3783 | | -0.8 | -6.0 | tRNA pseudouridine synthase B (NCBI) | compare |
| Rru_A1775 | | -0.8 | -1.5 | chromosome segregation and condensation protein ScpA (NCBI) | compare |
| Rru_A2988 | | -0.8 | -2.7 | Precorrin-6X reductase (NCBI) | compare |
| Rru_A1536 | | -0.8 | -3.3 | UvrD/REP helicase (NCBI) | compare |
| Rru_A0006 | | -0.8 | -2.5 | Plasmid maintenance system antidote protein (NCBI) | compare |
| Rru_A1890 | | -0.8 | -3.1 | hypothetical protein (NCBI) | compare |
| Rru_A1675 | | -0.8 | -6.1 | Cytochrome c assembly protein (NCBI) | compare |
| Rru_A2480 | | -0.8 | -1.4 | Methylmalonyl-CoA mutase (NCBI) | compare |
| Rru_A0148 | | -0.8 | -3.2 | GTP-binding protein TypA (NCBI) | compare |
| Rru_A0207 | | -0.8 | -2.9 | Cobalt chelatase, CobT subunit (NCBI) | compare |
| Rru_A1206 | | -0.8 | -1.1 | hypothetical protein (NCBI) | compare |
| Rru_A3054 | | -0.7 | -1.5 | Ribonuclease H (NCBI) | compare |
| Rru_A1179 | | -0.7 | -1.4 | Transcriptional Regulator, DeoR family (NCBI) | compare |
| Rru_A2989 | | -0.7 | -3.2 | Precorrin-3B C17-methyltransferase region (NCBI) | compare |
| Rru_A1517 | | -0.7 | -2.3 | transposase of ISBst12-like element (NCBI) | compare |
| Rru_A3322 | | -0.7 | -3.1 | Transcriptional Regulator, Crp/Fnr family (NCBI) | compare |
| Rru_A1454 | | -0.7 | -1.4 | Phage Tail Collar (NCBI) | compare |
| Rru_A0159 | | -0.7 | -2.3 | Exodeoxyribonuclease VII (NCBI) | compare |
| Rru_A1768 | | -0.7 | -2.1 | Protein-L-isoaspartate(D-aspartate) O-methyltransferase (NCBI) | compare |
| Rru_A2510 | | -0.7 | -1.0 | hypothetical protein (NCBI) | compare |
| Rru_A2990 | | -0.7 | -4.4 | precorrin-2 C20-methyltransferase (NCBI) | compare |
| Rru_A1648 | | -0.7 | -1.5 | Helix-turn-helix protein, CopG (NCBI) | compare |
| Rru_A0922 | | -0.7 | -1.6 | Protein of unknown function DUF1044 (NCBI) | compare |
| Rru_A3393 | | -0.7 | -3.4 | Penicillin-binding protein 1A (NCBI) | compare |
| Rru_A3273 | | -0.7 | -2.1 | Protein of unknown function DUF1470 (NCBI) | compare |
| Rru_A2760 | | -0.7 | -0.2 | hypothetical protein (NCBI) | compare |
| Rru_A2983 | | -0.7 | -1.7 | Polyprenyl synthetase (NCBI) | compare |
| Rru_A0637 | | -0.7 | -1.3 | hypothetical protein (NCBI) | compare |
| Rru_A1051 | | -0.7 | -1.2 | Phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI) | compare |
| Rru_A1309 | | -0.7 | -3.8 | acetoacetyl-CoA reductase (NCBI) | compare |
| Rru_A1085 | | -0.7 | -1.9 | Metallophosphoesterase (NCBI) | compare |
| Rru_A2244 | | -0.7 | -5.6 | Glycogen/starch/alpha-glucan phosphorylase (NCBI) | compare |
| Rru_A1319 | | -0.7 | -1.9 | Triphosphoribosyl-dephospho-CoA synthase (NCBI) | compare |
| Rru_A0661 | | -0.7 | -2.5 | Hly-III related proteins (NCBI) | compare |
| Rru_A1047 | | -0.7 | -4.4 | 6-phosphofructokinase (NCBI) | compare |
| Rru_A3704 | | -0.7 | -1.9 | Periplasmic solute binding protein (NCBI) | compare |
| Rru_A0404 | | -0.6 | -5.2 | Amidophosphoribosyl transferase (NCBI) | compare |
| Rru_A3782 | | -0.6 | -2.8 | Ribosome-binding factor A (NCBI) | compare |
| Rru_A0846 | | -0.6 | -1.7 | hypothetical protein (NCBI) | compare |
| Rru_A1208 | | -0.6 | -3.0 | AFG1-like ATPase (NCBI) | compare |
| Rru_A3359 | | -0.6 | -4.0 | Cobyrinic acid a,c-diamide synthase CbiA (NCBI) | compare |
| Rru_A1854 | | -0.6 | -3.0 | Pyridoxal phosphate biosynthetic protein PdxJ (NCBI) | compare |
| Rru_A2115 | | -0.6 | -4.0 | Phosphoglucomutase/phosphomannomutase (NCBI) | compare |
| Rru_A0432 | | -0.6 | -2.4 | 4-hydroxythreonine-4-phosphate dehydrogenase (NCBI) | compare |
| Rru_A3366 | | -0.6 | -4.5 | Cobaltochelatase, CobN subunit (NCBI) | compare |
| Rru_A1884 | | -0.6 | -1.5 | Periplasmic Sensor Signal Transduction Histidine Kinase (NCBI) | compare |
| Rru_A2085 | | -0.6 | -1.7 | Nitrogen regulatory protein P-II (GlnB, GlnK) (NCBI) | compare |
| Rru_A1136 | | -0.6 | -4.2 | Periplasmic binding protein (NCBI) | compare |
| Rru_A3502 | | -0.6 | -0.6 | hypothetical protein (NCBI) | compare |
| Rru_A3539 | | -0.6 | -3.3 | GlnB (protein PII) uridylyltransferase, GlnD (NCBI) | compare |
| Rru_A0394 | | -0.6 | -1.4 | Amino-acid N-acetyltransferase (NCBI) | compare |
| Rru_A0329 | | -0.6 | -2.3 | hypothetical protein (NCBI) | compare |
| Rru_A1607 | | -0.6 | -4.3 | 4-alpha-glucanotransferase (NCBI) | compare |
| Rru_A1074 | | -0.6 | -1.0 | MotA/TolQ/ExbB proton channel family protein (NCBI) | compare |
| Rru_A1235 | | -0.6 | -1.9 | Protein of unknown function DUF163 (NCBI) | compare |
| Rru_A3627 | | -0.6 | -2.3 | Cobyrinic acid a,c-diamide synthase (NCBI) | compare |
| Rru_A2281 | | -0.6 | -2.2 | NifQ (NCBI) | compare |
| Rru_A1549 | | -0.6 | -2.5 | Trigger factor (NCBI) | compare |
| Rru_A3382 | | -0.6 | -2.5 | Cobalamin biosynthesis protein CbiB (NCBI) | compare |
| Rru_A2566 | | -0.6 | -1.3 | hypothetical protein (NCBI) | compare |
| Rru_A0225 | | -0.5 | -2.2 | Metal dependent phosphohydrolase, HD region (NCBI) | compare |
| Rru_A1138 | | -0.5 | -2.9 | ABC transporter component (NCBI) | compare |
| Rru_A2182 | | -0.5 | -2.9 | NAD(P)(+) transhydrogenase (AB-specific) (NCBI) | compare |
| Rru_A3275 | | -0.5 | -1.9 | Hsp33 protein (NCBI) | compare |
| Rru_A1837 | | -0.5 | -2.2 | Porphobilinogen synthase (NCBI) | compare |
| Rru_A1137 | | -0.5 | -4.6 | transport system permease protein (NCBI) | compare |
| Rru_A2029 | | -0.5 | -1.5 | Serine O-acetyltransferase (NCBI) | compare |
| Rru_A3384 | | -0.5 | -2.0 | Precorrin-4 C11-methyltransferase region (NCBI) | compare |
| Rru_A3254 | | -0.5 | -1.8 | ABC transporter component (NCBI) | compare |
| Rru_A2888 | | -0.5 | -1.9 | hypothetical protein (NCBI) | compare |
| Rru_A1086 | | -0.5 | -1.9 | hypothetical protein (RefSeq) | compare |
| Rru_A2224 | | -0.5 | -1.0 | Transcriptional Regulator, MarR family (NCBI) | compare |
| Rru_A1552 | | -0.5 | -0.9 | Peptidase S16, ATP-dependent protease La (NCBI) | compare |
| Rru_A2632 | | -0.5 | -1.2 | Peptidoglycan-binding domain 1 (NCBI) | compare |
| Rru_A0770 | | -0.5 | -4.2 | Peptidase M23B (NCBI) | compare |
| Rru_A0052 | | -0.5 | -4.2 | Biotin carboxylase (NCBI) | compare |
| Rru_A0615 | | -0.5 | -1.7 | photosynthetic complex assembly protein (NCBI) | compare |
| Rru_A2709 | | -0.5 | -2.1 | Thioesterase superfamily (NCBI) | compare |
| Rru_A0100 | | -0.5 | -0.8 | hypothetical protein (NCBI) | compare |
| Rru_A0064 | | -0.5 | -1.1 | squalene-phytoene synthase (NCBI) | compare |
| Rru_A2893 | | -0.5 | -1.5 | ABC-3 transporter component (NCBI) | compare |
| Rru_A3240 | | -0.5 | -1.2 | Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain (NCBI) | compare |
| Rru_A2479 | | -0.5 | -3.3 | Methylmalonyl-CoA mutase-like (NCBI) | compare |
| Rru_A0406 | | -0.5 | -2.3 | DNA repair protein RadA (NCBI) | compare |
| Rru_A2109 | | -0.5 | -3.5 | ATP-dependent Clp protease ATP-binding subunit ClpA (NCBI) | compare |
| Rru_A2246 | | -0.5 | -4.2 | Glucose-1-phosphate adenylyltransferase (NCBI) | compare |
| Rru_A2514 | | -0.5 | -2.5 | Twin-arginine translocation pathway signal (NCBI) | compare |
| Rru_A2287 | | -0.5 | -2.8 | Protein of unknown function DUF86 (NCBI) | compare |
| Rru_B0050 | | -0.5 | -0.9 | dTDP-glucose 4,6-dehydratase (NCBI) | compare |
| Rru_A0788 | | -0.5 | -1.7 | ABC transporter component (NCBI) | compare |
| Rru_A2140 | | -0.5 | -1.8 | Transcriptional Regulator, XRE family (NCBI) | compare |
| Rru_A3139 | | -0.5 | -2.6 | Transcriptional Regulator, GntR family (NCBI) | compare |
| Rru_A0562 | | -0.5 | -0.8 | Peptidase S1 and S6, chymotrypsin/Hap (NCBI) | compare |
| Rru_A0521 | | -0.5 | -3.1 | CheA Signal Transduction Histidine Kinases (STHK) (NCBI) | compare |
| Rru_A2440 | | -0.5 | -2.3 | NADH:ubiquinone oxidoreductase 17.2 kD subunit (NCBI) | compare |
| Rru_A2994 | | -0.5 | -1.3 | hypothetical protein (NCBI) | compare |
| Rru_A1525 | | -0.5 | -1.4 | Nucleoside diphosphate pyrophosphatase (NCBI) | compare |
| Rru_A2166 | | -0.4 | -2.5 | hypothetical protein (NCBI) | compare |
| Rru_A2562 | | -0.4 | -2.2 | CheW protein (NCBI) | compare |
| Rru_A2857 | | -0.4 | -2.8 | Flagellar FlbT (NCBI) | compare |
| Rru_A1167 | | -0.4 | -1.0 | putative hydrogenase expression/formation protein HupK (NCBI) | compare |
| Rru_A1218 | | -0.4 | -1.4 | phage shock protein A, PspA (NCBI) | compare |
| Rru_B0025 | | -0.4 | -2.2 | hypothetical protein (NCBI) | compare |
| Rru_A3255 | | -0.4 | -1.3 | Protein of unknown function DUF214 (NCBI) | compare |
| Rru_A1571 | | -0.4 | -2.0 | metallo-beta-lactamase (NCBI) | compare |
| Rru_A3770 | | -0.4 | -2.6 | tRNA-i(6)A37 modification enzyme MiaB (NCBI) | compare |
| Rru_A1015 | | -0.4 | -2.1 | Binding-protein-dependent transport systems inner membrane component (NCBI) | compare |
| Rru_A1611 | | -0.4 | -1.4 | Cobalamin synthesis protein/P47K (NCBI) | compare |
| Rru_A1839 | | -0.4 | -1.9 | TRAP-type C4-dicarboxylate transport system periplasmic component-like (NCBI) | compare |
| Rru_A2216 | | -0.4 | -1.4 | Protein of unknown function DUF1127 (NCBI) | compare |
| Rru_A1190 | | -0.4 | -0.9 | 3-isopropylmalate dehydratase small subunit region (NCBI) | compare |
| Rru_A0496 | | -0.4 | -1.6 | Cyclic nucleotide-binding domain (cNMP-BD) protein (NCBI) | compare |
| Rru_A2401 | | -0.4 | -1.9 | RuBisCO transcriptional regulator cbbR, LysR family (NCBI) | compare |
| Rru_A1641 | | -0.4 | -2.3 | cation antiporter (NCBI) | compare |
| Rru_A3739 | | -0.4 | -1.4 | hypothetical protein (NCBI) | compare |
| Rru_A3285 | | -0.4 | -1.4 | Response regulator receiver domain protein (CheY) (NCBI) | compare |
| Rru_A1393 | | -0.4 | -1.0 | Nitrogenase (NCBI) | compare |
| Rru_A0096 | | -0.4 | -1.5 | Secretion protein HlyD (NCBI) | compare |
| Rru_A3089 | | -0.4 | -2.1 | hypothetical protein (NCBI) | compare |
| Rru_A1366 | | -0.4 | -3.3 | Transcriptional Regulator, DeoR family (NCBI) | compare |
| Rru_A1191 | | -0.4 | -2.8 | 3-isopropylmalate dehydrogenase (NCBI) | compare |
| Rru_A2018 | | -0.4 | -0.6 | hypothetical protein (NCBI) | compare |
| Rru_A3167 | | -0.4 | -2.1 | Binding-protein-dependent transport systems inner membrane component (NCBI) | compare |
| Rru_A2517 | | -0.4 | -2.6 | AMP-dependent synthetase and ligase (NCBI) | compare |
| Rru_A0746 | | -0.4 | -1.5 | hypothetical protein (NCBI) | compare |
| Rru_A3268 | | -0.4 | -1.4 | hypothetical protein (NCBI) | compare |
| Rru_A0021 | | -0.4 | -1.1 | Transcriptional Regulator, MarR family (NCBI) | compare |
| Rru_A1635 | | -0.4 | -3.2 | NADH dehydrogenase (quinone) (NCBI) | compare |
| Rru_A0319 | | -0.4 | -2.6 | NADH-ubiquinone oxidoreductase, chain 4L (NCBI) | compare |
| Rru_A2907 | | -0.4 | -0.7 | Anti-Sigma-factor antagonist (STAS) domain protein (NCBI) | compare |
| Rru_A1614 | | -0.4 | -2.2 | hypothetical protein (NCBI) | compare |
| Rru_A1973 | | -0.4 | -2.4 | Transcriptional Regulator, LacI family (NCBI) | compare |
| Rru_A1642 | | -0.4 | -2.1 | putative sulfonate/nitrate transport system substrate-binding protein (NCBI) | compare |
| Rru_A0700 | | -0.4 | -0.5 | Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain (NCBI) | compare |
| Rru_A1308 | | -0.4 | -3.1 | Acyl-CoA dehydrogenase (NCBI) | compare |
| Rru_A3169 | | -0.4 | -1.9 | ABC transporter component (NCBI) | compare |
| Rru_A1953 | | -0.4 | -1.9 | hypothetical protein (NCBI) | compare |
| Rru_A3677 | | -0.4 | -1.8 | Tripartite ATP-independent periplasmic transporter, DctQ component (NCBI) | compare |
| Rru_A1865 | | -0.4 | -2.2 | Dihydrodipicolinate synthase subfamily (NCBI) | compare |