Experiment set7IT087 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM L-Methionine

200 most important genes:

  gene name fitness t score description  
MMP_RS08715 -5.9 -1.8 formylmethanofuran dehydrogenase subunit B compare
MMP_RS04445 -5.8 -9.6 P-II family nitrogen regulator compare
MMP_RS03035 -5.6 -3.4 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS02355 -5.5 -3.2 30S ribosomal protein S27ae compare
MMP_RS04440 -5.5 -10.4 nitrogenase iron protein compare
MMP_RS08435 -5.4 -2.7 Era-like GTP-binding protein compare
MMP_RS07635 -5.2 -10.4 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS04460 -5.2 -24.0 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS02010 -5.2 -12.7 PHP domain-containing protein compare
MMP_RS04465 -5.2 -21.5 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS00555 -5.2 -9.2 MFS transporter compare
MMP_RS04455 -5.0 -26.7 nitrogenase subunit alpha compare
MMP_RS04470 -5.0 -20.9 nitrogenase compare
MMP_RS08165 -5.0 -2.5 phosphoglycerate dehydrogenase compare
MMP_RS06400 -4.9 -1.8 4Fe-4S binding protein compare
MMP_RS01500 -4.9 -2.5 CBS domain-containing protein compare
MMP_RS04450 -4.9 -17.9 P-II family nitrogen regulator compare
MMP_RS07845 -4.9 -2.1 LL-diaminopimelate aminotransferase compare
MMP_RS02685 -4.9 -12.6 molybdate ABC transporter substrate-binding protein compare
MMP_RS02675 -4.9 -3.7 hypothetical protein compare
MMP_RS05550 -4.7 -0.7 cation:proton antiporter compare
MMP_RS08720 -4.7 -2.0 4Fe-4S binding protein compare
MMP_RS09020 -4.7 -2.0 hypothetical protein compare
MMP_RS02670 -4.6 -14.9 ATP-binding cassette domain-containing protein compare
MMP_RS05930 -4.5 -2.6 3-isopropylmalate dehydratase large subunit compare
MMP_RS01175 -4.5 -4.7 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS02145 -4.5 -12.1 winged helix-turn-helix transcriptional regulator compare
MMP_RS03315 -4.5 -1.6 ferrous iron transport protein A compare
MMP_RS04710 -4.4 -2.1 hypothetical protein compare
MMP_RS08210 -4.4 -2.4 phosphatidylglycerophosphatase A compare
MMP_RS07345 -4.4 -6.6 glycine synthesis protein GlyXL (from data) compare
MMP_RS05500 -4.4 -10.2 2-isopropylmalate synthase compare
MMP_RS06475 -4.3 -5.9 FAD-dependent oxidoreductase compare
MMP_RS08860 -4.3 -5.2 MinD/ParA family protein compare
MMP_RS07185 -4.3 -15.8 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS00455 -4.2 -8.3 orotate phosphoribosyltransferase-like protein compare
MMP_RS03700 -4.2 -11.4 sodium:proton antiporter compare
MMP_RS07525 -4.2 -8.9 4Fe-4S binding protein compare
MMP_RS02800 -4.1 -10.7 nucleotidyltransferase domain-containing protein compare
MMP_RS04790 -4.0 -15.2 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS02680 -4.0 -7.2 ABC transporter permease compare
MMP_RS02730 -4.0 -14.7 ModD protein compare
MMP_RS01225 -3.9 -6.7 DUF5379 domain-containing protein compare
MMP_RS00750 -3.9 -2.4 fumarate hydratase compare
MMP_RS06270 -3.9 -6.5 TIGR00300 family protein compare
MMP_RS07365 -3.9 -15.0 2-phosphoglycerate kinase compare
MMP_RS01755 -3.9 -1.4 DUF2097 domain-containing protein compare
MMP_RS03445 -3.9 -1.0 methanogenesis marker 17 protein compare
MMP_RS06285 -3.8 -3.2 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS03450 -3.8 -2.5 glycine synthesis protein GlyXS (from data) compare
MMP_RS00040 -3.8 -7.9 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS01610 -3.7 -4.1 hypothetical protein compare
MMP_RS04090 -3.7 -3.2 hypothetical protein compare
MMP_RS08440 -3.7 -3.2 cell division protein SepF compare
MMP_RS03960 -3.7 -1.1 hypothetical protein compare
MMP_RS07075 -3.7 -5.3 phosphomannomutase/phosphoglucomutase compare
MMP_RS07390 -3.6 -2.8 cell division protein FtsZ compare
MMP_RS01900 -3.6 -20.3 hypothetical protein compare
MMP_RS03435 -3.6 -1.8 ketol-acid reductoisomerase compare
MMP_RS07600 -3.6 -2.9 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS07605 -3.6 -3.9 diadenylate cyclase compare
MMP_RS07955 -3.5 -6.2 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS02240 -3.5 -4.3 methanogenesis marker 7 protein compare
MMP_RS07435 -3.5 -2.3 GMP synthase subunit A compare
MMP_RS02195 -3.5 -4.4 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS01890 -3.5 -5.5 nucleotide sugar dehydrogenase compare
MMP_RS01005 -3.5 -1.4 riboflavin synthase compare
MMP_RS00915 -3.4 -8.3 DUF116 domain-containing protein compare
MMP_RS01020 -3.4 -1.1 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS00305 -3.4 -1.9 phosphoribosyl-ATP diphosphatase compare
MMP_RS02245 -3.4 -3.8 hypothetical protein compare
MMP_RS07200 -3.4 -8.6 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS01725 -3.4 -4.6 class I SAM-dependent methyltransferase family protein compare
MMP_RS01800 -3.3 -4.6 TIGR00303 family protein compare
MMP_RS01925 -3.3 -12.4 DUF1616 domain-containing protein compare
MMP_RS00515 -3.3 -0.7 DUF655 domain-containing protein compare
MMP_RS06355 -3.3 -3.3 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS04585 -3.3 -10.2 AIR synthase related protein compare
MMP_RS06625 -3.3 -2.0 DNA primase compare
MMP_RS01545 -3.3 -1.1 CBS domain-containing protein compare
MMP_RS07735 -3.3 -1.0 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS06725 -3.3 -14.8 hypothetical protein compare
MMP_RS01880 -3.3 -6.6 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS06895 -3.3 -2.2 selenocysteine-specific translation elongation factor compare
MMP_RS03475 -3.3 -0.8 hypothetical protein compare
MMP_RS05250 -3.2 -2.0 NFYB/HAP3 family transcription factor subunit compare
MMP_RS04870 -3.2 -6.2 TIGR02253 family HAD-type hydrolase compare
MMP_RS05925 -3.2 -3.3 small nuclear ribonucleoprotein compare
MMP_RS08645 -3.2 -10.4 UPF0179 family protein compare
MMP_RS03025 -3.2 -7.3 molybdenum cofactor guanylyltransferase compare
MMP_RS07380 -3.2 -2.1 transcription elongation factor Spt5 compare
MMP_RS00985 -3.2 -6.5 CDC48 family AAA ATPase compare
MMP_RS01385 -3.1 -0.6 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS07445 -3.1 -4.1 helix-turn-helix domain-containing protein compare
MMP_RS01885 -3.1 -9.4 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS04685 -3.1 -4.1 DUF126 domain-containing protein compare
MMP_RS08500 -3.1 -6.6 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS06670 -3.1 -6.8 glucose-6-phosphate isomerase compare
MMP_RS01220 -3.1 -7.7 hypothetical protein compare
MMP_RS03600 -3.1 -2.7 triose-phosphate isomerase compare
MMP_RS03580 -3.1 -3.8 signal recognition particle-docking protein FtsY compare
MMP_RS07730 -3.1 -2.1 pyruvate synthase subunit beta compare
MMP_RS06295 -3.0 -9.1 methanogenesis marker 14 protein compare
MMP_RS01830 -3.0 -1.5 tRNA-Val compare
MMP_RS08790 -3.0 -2.5 translation initiation factor IF-2 subunit alpha compare
MMP_RS05430 -3.0 -5.8 TIGR00288 family NYN domain-containing protein compare
MMP_RS08635 -2.9 -2.2 UbiA family prenyltransferase compare
MMP_RS00810 -2.9 -8.2 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS04780 -2.9 -3.7 ribonuclease P compare
MMP_RS04890 -2.8 -0.8 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS08650 -2.8 -3.4 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS02345 -2.8 -3.8 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS07355 -2.8 -1.0 transcription factor S compare
MMP_RS05265 -2.7 -2.3 2-isopropylmalate synthase compare
MMP_RS04500 -2.7 -16.6 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS06020 -2.7 -4.4 archaeoflavoprotein AfpA compare
MMP_RS05640 -2.7 -9.1 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS06885 -2.7 -2.6 50S ribosome-binding GTPase compare
MMP_RS00300 -2.6 -0.7 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS06730 -2.6 -2.1 phosphopantothenate/pantothenate synthetase compare
MMP_RS08195 -2.6 -9.6 hypothetical protein compare
MMP_RS00735 -2.6 -3.6 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS00695 -2.6 -0.9 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS05920 -2.6 -0.4 50S ribosomal protein L37e compare
MMP_RS01455 -2.6 -4.7 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS00685 -2.6 -4.2 2-phospho-L-lactate guanylyltransferase compare
MMP_RS01875 -2.6 -9.0 N-acetyltransferase compare
MMP_RS02175 -2.6 -0.8 DUF1611 domain-containing protein compare
MMP_RS06175 -2.5 -6.3 winged helix-turn-helix transcriptional regulator compare
MMP_RS03205 -2.5 -1.7 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS03110 -2.5 -7.0 glycosyltransferase family 2 protein compare
MMP_RS06855 -2.5 -10.8 hypothetical protein compare
MMP_RS08460 -2.5 -2.6 proteasome-activating nucleotidase compare
MMP_RS07545 -2.5 -1.0 HTH domain-containing protein compare
MMP_RS00115 -2.5 -11.4 radical SAM protein compare
MMP_RS08820 -2.5 -6.2 hypothetical protein compare
MMP_RS00320 -2.5 -1.9 class I SAM-dependent methyltransferase compare
MMP_RS05280 -2.5 -7.4 COG1361 S-layer family protein compare
MMP_RS00730 -2.4 -5.4 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS06230 -2.4 -2.7 helix-turn-helix domain-containing protein compare
MMP_RS04850 -2.4 -15.6 UPF0254 family protein compare
MMP_RS06350 -2.4 -6.0 HesA/MoeB/ThiF family protein compare
MMP_RS01795 -2.4 -1.8 methanogenesis marker 6 protein compare
MMP_RS00895 -2.4 -3.7 hypothetical protein compare
MMP_RS08570 -2.4 -9.6 coenzyme F420-0:L-glutamate ligase compare
MMP_RS06370 -2.4 -5.0 biotin synthase BioB compare
MMP_RS03440 -2.3 -1.3 MoaD/ThiS family protein compare
MMP_RS08300 -2.3 -1.1 metal-sulfur cluster assembly factor compare
MMP_RS03390 -2.3 -6.4 malate dehydrogenase compare
MMP_RS08155 -2.3 -8.2 hypothetical protein compare
MMP_RS07695 -2.3 -5.4 DUF3236 domain-containing protein compare
MMP_RS05345 -2.3 -8.4 hypothetical protein compare
MMP_RS08100 -2.3 -6.9 8-amino-7-oxononanoate synthase compare
MMP_RS04900 -2.3 -14.7 hypothetical protein compare
MMP_RS05425 -2.3 -5.6 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS01325 -2.3 -1.8 dihydroneopterin aldolase family protein compare
MMP_RS05460 -2.2 -11.7 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS06395 -2.2 -3.4 ThiF family adenylyltransferase compare
MMP_RS06120 -2.2 -2.2 UPF0147 family protein compare
MMP_RS06975 -2.2 -2.1 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS07005 -2.2 -0.6 4Fe-4S binding protein compare
MMP_RS07535 -2.2 -10.6 4Fe-4S binding protein compare
MMP_RS05285 -2.2 -8.5 MMPL family transporter compare
MMP_RS05765 -2.2 -6.7 M42 family metallopeptidase compare
MMP_RS08095 -2.2 -7.1 dethiobiotin synthase compare
MMP_RS03020 -2.2 -5.6 peptidylprolyl isomerase compare
MMP_RS03015 -2.2 -6.1 GTP 3' 8-cyclase MoaA compare
MMP_RS01915 -2.1 -12.3 DUF354 domain-containing protein compare
MMP_RS08745 -2.1 -5.1 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS05535 -2.1 -5.1 hypothetical protein compare
MMP_RS05515 -2.1 -5.4 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS07700 -2.1 -8.4 DUF1188 domain-containing protein compare
MMP_RS03535 -2.1 -2.1 helix-turn-helix transcriptional regulator compare
MMP_RS04720 -2.1 -2.5 DedA family protein compare
MMP_RS01380 -2.1 -4.4 PHP domain-containing protein compare
MMP_RS00310 -2.1 -5.5 CBS domain-containing protein compare
MMP_RS01975 -2.0 -11.8 hypothetical protein compare
MMP_RS00720 -2.0 -6.2 metal-dependent hydrolase compare
MMP_RS02875 -2.0 -8.1 chorismate pyruvate-lyase family protein compare
MMP_RS01375 -2.0 -11.6 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase compare
MMP_RS02280 -2.0 -0.8 DUF211 domain-containing protein compare
MMP_RS08105 -2.0 -6.7 6-carboxyhexanoate--CoA ligase compare
MMP_RS03400 -2.0 -2.9 archease compare
MMP_RS05540 -2.0 -2.6 hypothetical protein compare
MMP_RS08705 -2.0 -6.0 sulfopyruvate decarboxylase subunit beta compare
MMP_RS05845 -2.0 -1.6 tRNA-intron lyase compare
MMP_RS03420 -2.0 -3.9 acetolactate synthase small subunit compare
MMP_RS07685 -2.0 -6.1 TIGR01212 family radical SAM protein compare
MMP_RS02135 -2.0 -5.1 DUF5612 domain-containing protein compare
MMP_RS06105 -2.0 -7.6 hydrogenase maturation peptidase HycI compare
MMP_RS03140 -2.0 -9.3 hypothetical protein compare
MMP_RS01905 -2.0 -10.5 glycosyltransferase compare
MMP_RS01265 -2.0 -2.4 hypothetical protein compare
MMP_RS05020 -1.9 -4.1 hypothetical protein compare
MMP_RS01365 -1.9 -2.0 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS05555 -1.9 -1.4 DUF4040 domain-containing protein compare
MMP_RS02190 -1.9 -3.2 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS07575 -1.9 -2.9 RNA ligase partner protein compare
MMP_RS06315 -1.9 -0.8 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS02780 -1.9 -5.7 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source L-Methionine in Methanococcus maripaludis S2

For nitrogen source L-Methionine across organisms