Experiment set7IT086 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM L-Methionine

200 most important genes:

  gene name fitness t score description  
MMP_RS02355 -6.5 -2.9 30S ribosomal protein S27ae compare
MMP_RS08715 -5.9 -1.9 formylmethanofuran dehydrogenase subunit B compare
MMP_RS03315 -5.5 -1.5 ferrous iron transport protein A compare
MMP_RS01175 -5.1 -5.8 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS04450 -5.1 -16.4 P-II family nitrogen regulator compare
MMP_RS03435 -5.1 -1.6 ketol-acid reductoisomerase compare
MMP_RS04460 -5.1 -25.5 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS04445 -5.1 -11.1 P-II family nitrogen regulator compare
MMP_RS04455 -5.0 -25.7 nitrogenase subunit alpha compare
MMP_RS07345 -5.0 -8.3 glycine synthesis protein GlyXL (from data) compare
MMP_RS04465 -5.0 -22.0 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS05500 -4.9 -10.9 2-isopropylmalate synthase compare
MMP_RS01755 -4.9 -1.1 DUF2097 domain-containing protein compare
MMP_RS04440 -4.8 -13.2 nitrogenase iron protein compare
MMP_RS00555 -4.8 -10.1 MFS transporter compare
MMP_RS04470 -4.7 -19.8 nitrogenase compare
MMP_RS08720 -4.7 -2.1 4Fe-4S binding protein compare
MMP_RS03450 -4.6 -2.6 glycine synthesis protein GlyXS (from data) compare
MMP_RS03035 -4.6 -4.5 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS06475 -4.5 -6.1 FAD-dependent oxidoreductase compare
MMP_RS09020 -4.5 -2.0 hypothetical protein compare
MMP_RS02010 -4.4 -12.7 PHP domain-containing protein compare
MMP_RS07635 -4.4 -8.0 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS08165 -4.3 -3.0 phosphoglycerate dehydrogenase compare
MMP_RS02680 -4.3 -8.3 ABC transporter permease compare
MMP_RS04710 -4.2 -2.0 hypothetical protein compare
MMP_RS02675 -4.2 -4.1 hypothetical protein compare
MMP_RS03640 -4.2 -5.1 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS01385 -4.1 -0.6 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS07185 -4.1 -15.6 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS01500 -4.1 -2.9 CBS domain-containing protein compare
MMP_RS01610 -4.1 -3.6 hypothetical protein compare
MMP_RS01020 -4.1 -1.1 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS02685 -4.1 -17.5 molybdate ABC transporter substrate-binding protein compare
MMP_RS02345 -4.0 -4.3 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS02670 -4.0 -16.3 ATP-binding cassette domain-containing protein compare
MMP_RS03015 -4.0 -8.5 GTP 3' 8-cyclase MoaA compare
MMP_RS02145 -4.0 -12.3 winged helix-turn-helix transcriptional regulator compare
MMP_RS01225 -3.9 -5.7 DUF5379 domain-containing protein compare
MMP_RS06730 -3.9 -2.3 phosphopantothenate/pantothenate synthetase compare
MMP_RS07955 -3.9 -8.6 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS03445 -3.9 -1.0 methanogenesis marker 17 protein compare
MMP_RS05515 -3.9 -10.8 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS01800 -3.9 -4.7 TIGR00303 family protein compare
MMP_RS06355 -3.8 -2.5 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS03700 -3.8 -11.5 sodium:proton antiporter compare
MMP_RS06350 -3.8 -9.2 HesA/MoeB/ThiF family protein compare
MMP_RS05250 -3.8 -2.0 NFYB/HAP3 family transcription factor subunit compare
MMP_RS07380 -3.8 -2.8 transcription elongation factor Spt5 compare
MMP_RS06270 -3.8 -7.2 TIGR00300 family protein compare
MMP_RS02730 -3.7 -13.3 ModD protein compare
MMP_RS07365 -3.7 -14.8 2-phosphoglycerate kinase compare
MMP_RS05930 -3.7 -2.9 3-isopropylmalate dehydratase large subunit compare
MMP_RS07525 -3.7 -9.4 4Fe-4S binding protein compare
MMP_RS04585 -3.6 -15.5 AIR synthase related protein compare
MMP_RS02245 -3.6 -4.1 hypothetical protein compare
MMP_RS02800 -3.6 -8.9 nucleotidyltransferase domain-containing protein compare
MMP_RS00455 -3.5 -6.7 orotate phosphoribosyltransferase-like protein compare
MMP_RS04870 -3.5 -6.5 TIGR02253 family HAD-type hydrolase compare
MMP_RS00915 -3.5 -9.4 DUF116 domain-containing protein compare
MMP_RS07845 -3.5 -2.3 LL-diaminopimelate aminotransferase compare
MMP_RS04790 -3.5 -15.8 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS03025 -3.5 -7.2 molybdenum cofactor guanylyltransferase compare
MMP_RS06895 -3.4 -2.0 selenocysteine-specific translation elongation factor compare
MMP_RS08210 -3.4 -2.9 phosphatidylglycerophosphatase A compare
MMP_RS07730 -3.4 -2.3 pyruvate synthase subunit beta compare
MMP_RS08435 -3.4 -2.6 Era-like GTP-binding protein compare
MMP_RS07435 -3.3 -2.3 GMP synthase subunit A compare
MMP_RS08860 -3.3 -6.4 MinD/ParA family protein compare
MMP_RS08785 -3.3 -1.0 RNA-protein complex protein Nop10 compare
MMP_RS02240 -3.3 -4.4 methanogenesis marker 7 protein compare
MMP_RS07355 -3.3 -1.0 transcription factor S compare
MMP_RS08300 -3.3 -1.2 metal-sulfur cluster assembly factor compare
MMP_RS04685 -3.2 -4.0 DUF126 domain-containing protein compare
MMP_RS00750 -3.2 -2.6 fumarate hydratase compare
MMP_RS08500 -3.2 -7.2 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS00040 -3.2 -6.4 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS06625 -3.2 -2.3 DNA primase compare
MMP_RS06120 -3.1 -2.3 UPF0147 family protein compare
MMP_RS08635 -3.1 -2.1 UbiA family prenyltransferase compare
MMP_RS04090 -3.1 -3.2 hypothetical protein compare
MMP_RS03110 -3.1 -8.9 glycosyltransferase family 2 protein compare
MMP_RS01725 -3.1 -5.2 class I SAM-dependent methyltransferase family protein compare
MMP_RS01700 -3.0 -0.7 dihydroxy-acid dehydratase compare
MMP_RS06175 -3.0 -7.2 winged helix-turn-helix transcriptional regulator compare
MMP_RS06295 -3.0 -8.4 methanogenesis marker 14 protein compare
MMP_RS06400 -3.0 -1.8 4Fe-4S binding protein compare
MMP_RS06230 -3.0 -2.8 helix-turn-helix domain-containing protein compare
MMP_RS01795 -3.0 -2.0 methanogenesis marker 6 protein compare
MMP_RS00810 -2.9 -10.8 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS07445 -2.9 -6.3 helix-turn-helix domain-containing protein compare
MMP_RS00985 -2.9 -5.8 CDC48 family AAA ATPase compare
MMP_RS04780 -2.9 -3.6 ribonuclease P compare
MMP_RS04890 -2.8 -0.8 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS07735 -2.8 -1.0 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS06285 -2.8 -3.1 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS07200 -2.8 -7.8 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS01830 -2.7 -1.5 tRNA-Val compare
MMP_RS06725 -2.7 -12.6 hypothetical protein compare
MMP_RS07600 -2.7 -3.0 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS05430 -2.7 -5.8 TIGR00288 family NYN domain-containing protein compare
MMP_RS00685 -2.6 -4.6 2-phospho-L-lactate guanylyltransferase compare
MMP_RS01220 -2.6 -9.4 hypothetical protein compare
MMP_RS05925 -2.6 -4.5 small nuclear ribonucleoprotein compare
MMP_RS02195 -2.6 -4.4 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS04900 -2.6 -16.6 hypothetical protein compare
MMP_RS05920 -2.6 -0.4 50S ribosomal protein L37e compare
MMP_RS00695 -2.5 -0.9 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS01900 -2.5 -14.1 hypothetical protein compare
MMP_RS03390 -2.5 -9.1 malate dehydrogenase compare
MMP_RS08645 -2.5 -8.8 UPF0179 family protein compare
MMP_RS07695 -2.5 -7.9 DUF3236 domain-containing protein compare
MMP_RS01890 -2.5 -5.2 nucleotide sugar dehydrogenase compare
MMP_RS01885 -2.5 -8.5 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS05265 -2.4 -2.4 2-isopropylmalate synthase compare
MMP_RS07630 -2.4 -1.8 ATP-binding cassette domain-containing protein compare
MMP_RS01005 -2.4 -1.4 riboflavin synthase compare
MMP_RS08195 -2.4 -10.2 hypothetical protein compare
MMP_RS05550 -2.4 -0.8 cation:proton antiporter compare
MMP_RS08745 -2.4 -7.4 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS08650 -2.4 -3.5 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS06885 -2.4 -2.9 50S ribosome-binding GTPase compare
MMP_RS00735 -2.3 -3.8 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS00305 -2.3 -1.7 phosphoribosyl-ATP diphosphatase compare
MMP_RS02900 -2.3 -0.6 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS06020 -2.3 -5.3 archaeoflavoprotein AfpA compare
MMP_RS01455 -2.3 -3.7 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS07605 -2.2 -3.8 diadenylate cyclase compare
MMP_RS01925 -2.2 -11.0 DUF1616 domain-containing protein compare
MMP_RS06395 -2.2 -3.2 ThiF family adenylyltransferase compare
MMP_RS05555 -2.2 -1.6 DUF4040 domain-containing protein compare
MMP_RS07075 -2.2 -3.9 phosphomannomutase/phosphoglucomutase compare
MMP_RS01545 -2.2 -1.0 CBS domain-containing protein compare
MMP_RS07535 -2.2 -8.8 4Fe-4S binding protein compare
MMP_RS04500 -2.2 -12.9 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS05460 -2.2 -9.6 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS00895 -2.2 -4.0 hypothetical protein compare
MMP_RS03960 -2.1 -1.0 hypothetical protein compare
MMP_RS04605 -2.1 -6.1 cobalt ECF transporter T component CbiQ compare
MMP_RS01380 -2.1 -3.4 PHP domain-containing protein compare
MMP_RS07090 -2.1 -8.5 tRNA (adenine-N1)-methyltransferase compare
MMP_RS04850 -2.1 -14.0 UPF0254 family protein compare
MMP_RS06315 -2.1 -0.9 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS05345 -2.1 -7.0 hypothetical protein compare
MMP_RS08820 -2.1 -5.2 hypothetical protein compare
MMP_RS06925 -2.0 -2.7 ribonuclease VapC4 compare
MMP_RS09055 -2.0 -1.0 CAP domain-containing protein compare
MMP_RS06975 -2.0 -2.0 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS04875 -2.0 -6.0 energy-converting hydrogenase B subunit P compare
MMP_RS01195 -2.0 -1.2 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS07700 -2.0 -9.4 DUF1188 domain-containing protein compare
MMP_RS03580 -2.0 -3.3 signal recognition particle-docking protein FtsY compare
MMP_RS01265 -2.0 -2.7 hypothetical protein compare
MMP_RS08570 -2.0 -8.9 coenzyme F420-0:L-glutamate ligase compare
MMP_RS08940 -2.0 -1.3 MetS family NSS transporter small subunit compare
MMP_RS06670 -2.0 -5.4 glucose-6-phosphate isomerase compare
MMP_RS08790 -2.0 -2.1 translation initiation factor IF-2 subunit alpha compare
MMP_RS02175 -2.0 -0.8 DUF1611 domain-containing protein compare
MMP_RS01880 -1.9 -6.0 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS07755 -1.9 -1.2 DUF555 domain-containing protein compare
MMP_RS04955 -1.9 -6.2 DNA topoisomerase I compare
MMP_RS05425 -1.9 -5.1 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS00115 -1.9 -11.1 radical SAM protein compare
MMP_RS08095 -1.9 -6.6 dethiobiotin synthase compare
MMP_RS05845 -1.9 -1.6 tRNA-intron lyase compare
MMP_RS01875 -1.9 -9.3 N-acetyltransferase compare
MMP_RS01365 -1.9 -2.8 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS05640 -1.9 -6.1 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS01325 -1.9 -1.4 dihydroneopterin aldolase family protein compare
MMP_RS02780 -1.9 -5.8 hypothetical protein compare
MMP_RS02875 -1.9 -7.5 chorismate pyruvate-lyase family protein compare
MMP_RS03600 -1.8 -2.2 triose-phosphate isomerase compare
MMP_RS08460 -1.8 -2.2 proteasome-activating nucleotidase compare
MMP_RS06370 -1.8 -5.3 biotin synthase BioB compare
MMP_RS05875 -1.8 -2.7 hydroxyethylthiazole kinase compare
MMP_RS06855 -1.8 -8.5 hypothetical protein compare
MMP_RS07685 -1.8 -5.2 TIGR01212 family radical SAM protein compare
MMP_RS07390 -1.8 -2.2 cell division protein FtsZ compare
MMP_RS08105 -1.8 -6.7 6-carboxyhexanoate--CoA ligase compare
MMP_RS03485 -1.8 -3.1 TIGR00267 family protein compare
MMP_RS03205 -1.8 -1.5 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS03020 -1.8 -3.5 peptidylprolyl isomerase compare
MMP_RS06630 -1.7 -0.7 UPF0058 family protein compare
MMP_RS08330 -1.7 -6.2 NADH-quinone oxidoreductase subunit H compare
MMP_RS01085 -1.7 -1.7 hypothetical protein compare
MMP_RS08100 -1.7 -5.6 8-amino-7-oxononanoate synthase compare
MMP_RS01375 -1.7 -10.7 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase compare
MMP_RS08225 -1.7 -7.6 RimK family alpha-L-glutamate ligase compare
MMP_RS00320 -1.7 -1.4 class I SAM-dependent methyltransferase compare
MMP_RS00310 -1.7 -5.0 CBS domain-containing protein compare
MMP_RS03475 -1.7 -0.7 hypothetical protein compare
MMP_RS05535 -1.7 -4.9 hypothetical protein compare
MMP_RS03420 -1.7 -3.1 acetolactate synthase small subunit compare
MMP_RS00730 -1.7 -3.2 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS03440 -1.7 -1.2 MoaD/ThiS family protein compare
MMP_RS00725 -1.7 -5.5 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS02340 -1.6 -1.4 DNA-directed RNA polymerase subunit E'' compare
MMP_RS07545 -1.6 -0.9 HTH domain-containing protein compare
MMP_RS05815 -1.6 -1.9 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS02135 -1.6 -3.5 DUF5612 domain-containing protein compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source L-Methionine in Methanococcus maripaludis S2

For nitrogen source L-Methionine across organisms