Experiment set7IT085 for Pseudomonas fluorescens FW300-N1B4
Nitrate reduction
Group: anaerobicMedia: UGA + Sodium pyruvate (15 mM) + Sodium nitrate (30 mM), pH=6.8
Culturing: pseudo1_N1B4_ML1, 100mL Serum Bottle, Anaerobic, at 27 (C), shaken=175 rpm
Growth: about 2.4 generations
By: Alex Aaring on 12/9/2015
Specific Phenotypes
For 1 genes in this experiment
For anaerobic Sodium pyruvate in Pseudomonas fluorescens FW300-N1B4
For anaerobic Sodium pyruvate across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Formate hydrogenase | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| formate oxidation to CO2 | 1 | 1 | 1 |
| oxalate degradation VI | 4 | 1 | 1 |
| oxalate degradation III | 5 | 1 | 1 |
| superpathway of C1 compounds oxidation to CO2 | 12 | 5 | 1 |
| purine nucleobases degradation I (anaerobic) | 15 | 6 | 1 |
| purine nucleobases degradation II (anaerobic) | 24 | 16 | 1 |