| | gene | name | fitness | t score | description | |
|---|
| Rru_A3425 | | -7.4 | -8.7 | Phosphoribosylanthranilate isomerase (NCBI) | compare |
| Rru_A1239 | | -6.8 | -6.6 | Glutamate 5-kinase, ProB-related (NCBI) | compare |
| Rru_A1189 | | -6.5 | -15.1 | 3-isopropylmalate dehydratase large subunit region (NCBI) | compare |
| Rru_A3751 | | -6.2 | -14.5 | Argininosuccinate synthase (NCBI) | compare |
| Rru_A1928 | | -5.7 | -15.7 | Yeast 2-isopropylmalate synthase (NCBI) | compare |
| Rru_A3162 | | -5.5 | -19.7 | Prephenate dehydratase (NCBI) | compare |
| Rru_A1897 | | -5.5 | -8.4 | Indole-3-glycerol-phosphate synthase (NCBI) | compare |
| Rru_A3428 | | -5.4 | -18.0 | Tryptophan synthase (NCBI) | compare |
| Rru_A0397 | | -5.4 | -9.3 | Argininosuccinate lyase (NCBI) | compare |
| Rru_A1105 | | -5.2 | -3.6 | tRNA synthetase, class II (G, H, P and S) (NCBI) | compare |
| Rru_A2885 | | -5.2 | -21.9 | Carbamoyl-phosphate synthase, small subunit (NCBI) | compare |
| Rru_A0467 | | -5.2 | -20.5 | Acetolactate synthase, large subunit, biosynthetic type (NCBI) | compare |
| Rru_A1896 | | -5.1 | -11.3 | Anthranilate phosphoribosyl transferase (NCBI) | compare |
| Rru_A0394 | | -5.0 | -6.0 | Amino-acid N-acetyltransferase (NCBI) | compare |
| Rru_A2886 | | -5.0 | -24.6 | Carbamoyl-phosphate synthase, large subunit, glutamine-dependent (NCBI) | compare |
| Rru_A2772 | | -4.9 | -3.4 | ATP phosphoribosyltransferase (NCBI) | compare |
| Rru_A0469 | | -4.8 | -17.5 | Ketol-acid reductoisomerase (NCBI) | compare |
| Rru_A1786 | | -4.8 | -23.4 | Dihydroxy-acid dehydratase (NCBI) | compare |
| Rru_A0468 | | -4.8 | -6.3 | Acetolactate synthase, small subunit (NCBI) | compare |
| Rru_A3276 | | -4.7 | -5.5 | Ornithine carbamoyltransferase (NCBI) | compare |
| Rru_A3266 | | -4.7 | -11.5 | Homoserine O-acetyltransferase (NCBI) | compare |
| Rru_A3267 | | -4.7 | -8.3 | Methionine biosynthesis MetW (NCBI) | compare |
| Rru_A3341 | | -4.6 | -3.2 | Acetylglutamate kinase (NCBI) | compare |
| Rru_A1530 | | -4.5 | -19.9 | 5,10-methylenetetrahydrofolate reductase (NCBI) | compare |
| Rru_A3264 | | -4.5 | -5.4 | Histidinol-phosphate aminotransferase (NCBI) | compare |
| Rru_A1191 | | -4.5 | -12.5 | 3-isopropylmalate dehydrogenase (NCBI) | compare |
| Rru_A2549 | | -4.4 | -9.0 | HAD-superfamily hydrolase subfamily IIB (NCBI) | compare |
| Rru_A3594 | | -4.4 | -2.9 | Histidine biosynthesis protein HisF (NCBI) | compare |
| Rru_A1190 | | -4.3 | -2.6 | 3-isopropylmalate dehydratase small subunit region (NCBI) | compare |
| Rru_A3191 | | -3.8 | -17.1 | Dihydroorotase multifunctional complex type (NCBI) | compare |
| Rru_A3427 | | -3.7 | -14.5 | Tryptophan synthase, beta chain (NCBI) | compare |
| Rru_A3277 | | -3.7 | -8.2 | Acetylornithine and succinylornithine aminotransferase (NCBI) | compare |
| Rru_A3214 | | -3.7 | -14.7 | O-succinylhomoserine sulfhydrylase (NCBI) | compare |
| Rru_A1895 | | -3.6 | -2.2 | Glutamine amidotransferase of anthranilate synthase (NCBI) | compare |
| Rru_A3596 | | -3.6 | -5.9 | Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit (NCBI) | compare |
| Rru_A0514 | | -3.6 | -10.3 | Dihydroorotate dehydrogenase 2 (NCBI) | compare |
| Rru_A2936 | | -3.5 | -7.9 | Dihydroorotase multifunctional complex type (NCBI) | compare |
| Rru_A2421 | | -3.5 | -6.2 | N-acetyl-gamma-glutamyl-phosphate reductase (NCBI) | compare |
| Rru_A3190 | | -3.4 | -3.3 | Aspartate carbamoyltransferase (NCBI) | compare |
| Rru_A2507 | | -3.4 | -17.3 | Orotate phosphoribosyl transferase (NCBI) | compare |
| Rru_A3380 | | -3.4 | -3.8 | hypothetical protein (NCBI) | compare |
| Rru_A3165 | | -3.2 | -5.2 | Histidinol-phosphate phosphatase, putative, inositol monophosphatase (NCBI) | compare |
| Rru_A3424 | | -2.7 | -2.6 | Orotidine-5'-phosphate decarboxylase (NCBI) | compare |
| Rru_A2771 | | -2.7 | -4.0 | Histidinol dehydrogenase (NCBI) | compare |
| Rru_A1827 | | -2.5 | -6.5 | Glycine hydroxymethyltransferase (NCBI) | compare |
| Rru_A1432 | | -2.4 | -12.2 | Nicotinate-nucleotide pyrophosphorylase (NCBI) | compare |
| Rru_A1620 | | -2.4 | -4.2 | hypothetical protein (NCBI) | compare |
| Rru_A1084 | | -2.2 | -5.4 | 5-formyltetrahydrofolate cyclo-ligase (NCBI) | compare |
| Rru_A0265 | | -2.2 | -5.2 | Electron-transferring-flavoproteindehydrogenase (NCBI) | compare |
| Rru_A0963 | | -2.2 | -7.3 | MifU-like protein, Fe-S cluster formation (NCBI) | compare |
| Rru_A1434 | | -2.1 | -15.5 | Quinolinate synthetase A (NCBI) | compare |
| Rru_A3801 | | -2.1 | -3.8 | Enoyl-CoA hydratase/isomerase (NCBI) | compare |
| Rru_A2167 | | -2.1 | -3.9 | Phosphoribosylformylglycinamidine cyclo-ligase (NCBI) | compare |
| Rru_A1051 | | -2.0 | -2.3 | Phosphoribosylaminoimidazole carboxylase, ATPase subunit (NCBI) | compare |
| Rru_A0432 | | -2.0 | -5.7 | 4-hydroxythreonine-4-phosphate dehydrogenase (NCBI) | compare |
| Rru_A1865 | | -1.7 | -9.1 | Dihydrodipicolinate synthase subfamily (NCBI) | compare |
| Rru_A1841 | | -1.6 | -1.8 | Flavin reductase-like, FMN-binding (NCBI) | compare |
| Rru_A0683 | | -1.6 | -1.0 | 3-deoxy-7-phosphoheptulonate synthase (NCBI) | compare |
| Rru_A1854 | | -1.6 | -4.9 | Pyridoxal phosphate biosynthetic protein PdxJ (NCBI) | compare |
| Rru_A1529 | | -1.6 | -5.5 | Transcriptional Regulator, ArsR family (NCBI) | compare |
| Rru_A1085 | | -1.6 | -5.2 | Metallophosphoesterase (NCBI) | compare |
| Rru_A0010 | | -1.5 | -4.4 | Sigma-54 (RpoN) (NCBI) | compare |
| Rru_A2847 | | -1.5 | -3.1 | Transcriptional regulators, TraR/DksA family (NCBI) | compare |
| Rru_A3642 | | -1.4 | -2.1 | Negative regulator of class I heat shock protein (NCBI) | compare |
| Rru_A3571 | | -1.4 | -4.8 | Glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI) | compare |
| Rru_A3704 | | -1.4 | -3.4 | Periplasmic solute binding protein (NCBI) | compare |
| Rru_B0050 | | -1.3 | -1.9 | dTDP-glucose 4,6-dehydratase (NCBI) | compare |
| Rru_A1437 | | -1.3 | -5.1 | Sodium:dicarboxylate symporter (NCBI) | compare |
| Rru_A1436 | | -1.3 | -4.2 | Histidine Kinase (NCBI) | compare |
| Rru_A2411 | | -1.2 | -6.9 | Aminotransferase, class I and II (NCBI) | compare |
| Rru_A0404 | | -1.2 | -9.9 | Amidophosphoribosyl transferase (NCBI) | compare |
| Rru_A1775 | | -1.2 | -1.9 | chromosome segregation and condensation protein ScpA (NCBI) | compare |
| Rru_A1849 | | -1.2 | -2.1 | Recombination protein O, RecO (NCBI) | compare |
| Rru_A2574 | | -1.2 | -1.8 | Transcriptional Regulator, BadM/Rrf2 family (NCBI) | compare |
| Rru_A2994 | | -1.2 | -2.5 | hypothetical protein (NCBI) | compare |
| Rru_A0399 | | -1.2 | -3.5 | Phosphoesterase, PA-phosphatase related (NCBI) | compare |
| Rru_A1208 | | -1.1 | -4.9 | AFG1-like ATPase (NCBI) | compare |
| Rru_A1019 | | -1.1 | -3.2 | FAD dependent oxidoreductase (NCBI) | compare |
| Rru_A3533 | | -1.1 | -8.1 | hypothetical protein (NCBI) | compare |
| Rru_A0574 | | -1.1 | -3.1 | Carboxylyase-related protein (NCBI) | compare |
| Rru_A3010 | | -1.1 | -6.0 | Transcriptional Regulator, DeoR family (NCBI) | compare |
| Rru_A1433 | | -1.1 | -3.1 | L-aspartate oxidase (NCBI) | compare |
| Rru_A2100 | | -1.1 | -7.0 | Protein of unknown function DUF81 (NCBI) | compare |
| Rru_A3202 | | -1.1 | -5.5 | DNA topoisomerase (NCBI) | compare |
| Rru_A0596 | | -1.0 | -2.5 | Fructose-bisphosphate aldolase, class II, Calvin cycle subtype (NCBI) | compare |
| Rru_A0118 | | -1.0 | -1.6 | type II secretion system protein E (NCBI) | compare |
| Rru_A2370 | | -1.0 | -1.5 | GCN5-related N-acetyltransferase (NCBI) | compare |
| Rru_A3748 | | -1.0 | -3.9 | hypothetical protein (NCBI) | compare |
| Rru_A1552 | | -1.0 | -1.6 | Peptidase S16, ATP-dependent protease La (NCBI) | compare |
| Rru_A0454 | | -1.0 | -2.3 | Leucyl aminopeptidase (NCBI) | compare |
| Rru_A1435 | | -1.0 | -2.6 | Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) | compare |
| Rru_A0073 | | -1.0 | -3.7 | ribosomal subunit interface protein, putative (NCBI) | compare |
| Rru_A1179 | | -1.0 | -1.8 | Transcriptional Regulator, DeoR family (NCBI) | compare |
| Rru_A0746 | | -1.0 | -2.1 | hypothetical protein (NCBI) | compare |
| Rru_A0643 | | -1.0 | -4.7 | Protein of unknown function DUF152 (NCBI) | compare |
| Rru_A0006 | | -1.0 | -3.7 | Plasmid maintenance system antidote protein (NCBI) | compare |
| Rru_A1669 | | -1.0 | -2.7 | Transcriptional Regulator, MerR family (NCBI) | compare |
| Rru_A2244 | | -0.9 | -7.5 | Glycogen/starch/alpha-glucan phosphorylase (NCBI) | compare |
| Rru_A0700 | | -0.9 | -1.1 | Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain (NCBI) | compare |
| Rru_A2547 | | -0.9 | -7.1 | N-formylglutamate amidohydrolase (NCBI) | compare |
| Rru_A1308 | | -0.9 | -7.4 | Acyl-CoA dehydrogenase (NCBI) | compare |
| Rru_A1309 | | -0.9 | -4.8 | acetoacetyl-CoA reductase (NCBI) | compare |
| Rru_A1527 | | -0.9 | -5.7 | ABC transporter component (NCBI) | compare |
| Rru_A2800 | | -0.9 | -2.3 | hypothetical protein (NCBI) | compare |
| Rru_A2085 | | -0.9 | -2.2 | Nitrogen regulatory protein P-II (GlnB, GlnK) (NCBI) | compare |
| Rru_A3782 | | -0.9 | -3.2 | Ribosome-binding factor A (NCBI) | compare |
| Rru_A3378 | | -0.8 | -3.4 | hypothetical protein (NCBI) | compare |
| Rru_A3739 | | -0.8 | -3.0 | hypothetical protein (NCBI) | compare |
| Rru_A3329 | | -0.8 | -2.6 | hypothetical protein (NCBI) | compare |
| Rru_A2770 | | -0.8 | -1.9 | Uncharacterized conserved protein UCP032146 (NCBI) | compare |
| Rru_A1047 | | -0.8 | -5.2 | 6-phosphofructokinase (NCBI) | compare |
| Rru_A0398 | | -0.8 | -3.3 | Thiol-disulfide isomerase and thioredoxins-like (NCBI) | compare |
| Rru_A3743 | | -0.8 | -1.0 | hypothetical protein (NCBI) | compare |
| Rru_A2182 | | -0.8 | -2.3 | NAD(P)(+) transhydrogenase (AB-specific) (NCBI) | compare |
| Rru_A0696 | | -0.8 | -1.6 | RNA methyltransferase TrmH, group 1 (NCBI) | compare |
| Rru_A2907 | | -0.7 | -1.1 | Anti-Sigma-factor antagonist (STAS) domain protein (NCBI) | compare |
| Rru_A1537 | | -0.7 | -1.5 | hypothetical protein (NCBI) | compare |
| Rru_A2865 | | -0.7 | -3.7 | Peptidase M24 (NCBI) | compare |
| Rru_A2901 | | -0.7 | -1.5 | Histidine triad (HIT) protein (NCBI) | compare |
| Rru_A1137 | | -0.7 | -5.6 | transport system permease protein (NCBI) | compare |
| Rru_A1382 | | -0.7 | -2.1 | Butyrate-acetoacetate CoA-transferase (NCBI) | compare |
| Rru_A2760 | | -0.7 | -0.3 | hypothetical protein (NCBI) | compare |
| Rru_A3783 | | -0.7 | -5.3 | tRNA pseudouridine synthase B (NCBI) | compare |
| Rru_A3393 | | -0.7 | -3.3 | Penicillin-binding protein 1A (NCBI) | compare |
| Rru_A0908 | | -0.7 | -0.9 | microcompartments protein (NCBI) | compare |
| Rru_A0412 | | -0.7 | -1.8 | hypothetical protein (NCBI) | compare |
| Rru_A3548 | | -0.7 | -5.4 | Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase (NCBI) | compare |
| Rru_A2115 | | -0.7 | -4.3 | Phosphoglucomutase/phosphomannomutase (NCBI) | compare |
| Rru_A0645 | | -0.7 | -1.1 | Ribose-phosphate pyrophosphokinase (NCBI) | compare |
| Rru_A1074 | | -0.7 | -1.3 | MotA/TolQ/ExbB proton channel family protein (NCBI) | compare |
| Rru_A2530 | | -0.7 | -3.9 | hypothetical protein (NCBI) | compare |
| Rru_A1884 | | -0.7 | -1.6 | Periplasmic Sensor Signal Transduction Histidine Kinase (NCBI) | compare |
| Rru_A3054 | | -0.7 | -1.4 | Ribonuclease H (NCBI) | compare |
| Rru_A1136 | | -0.6 | -4.7 | Periplasmic binding protein (NCBI) | compare |
| Rru_A1218 | | -0.6 | -1.2 | phage shock protein A, PspA (NCBI) | compare |
| Rru_A3322 | | -0.6 | -2.7 | Transcriptional Regulator, Crp/Fnr family (NCBI) | compare |
| Rru_A0644 | | -0.6 | -2.4 | hypothetical protein (NCBI) | compare |
| Rru_A3547 | | -0.6 | -2.5 | hypothetical protein (NCBI) | compare |
| Rru_A3766 | | -0.6 | -2.8 | Transcriptional Regulator, MucR family (NCBI) | compare |
| Rru_A1048 | | -0.6 | -2.0 | Protein of unknown function DUF465 (NCBI) | compare |
| Rru_A2181 | | -0.6 | -4.7 | NAD(P) transhydrogenase, beta subunit (NCBI) | compare |
| Rru_A0296 | | -0.6 | -3.4 | hypothetical protein (NCBI) | compare |
| Rru_A1950 | | -0.6 | -0.7 | Transcriptional regulator, ModE family (NCBI) | compare |
| Rru_A2163 | | -0.6 | -1.1 | conserved hypothetical protein RP631 (NCBI) | compare |
| Rru_A3398 | | -0.6 | -1.3 | Transcriptional Regulator, XRE family (NCBI) | compare |
| Rru_A3773 | | -0.6 | -1.6 | CBS domain protein (NCBI) | compare |
| Rru_A1955 | | -0.6 | -1.2 | Phosphoribosyltransferase (NCBI) | compare |
| Rru_A2469 | | -0.6 | -1.6 | FeoA (NCBI) | compare |
| Rru_A1761 | | -0.6 | -1.0 | GCN5-related N-acetyltransferase (NCBI) | compare |
| Rru_B0025 | | -0.6 | -2.2 | hypothetical protein (NCBI) | compare |
| Rru_A0537 | | -0.6 | -1.6 | Protein of unknown function DUF955 (NCBI) | compare |
| Rru_A2140 | | -0.6 | -3.1 | Transcriptional Regulator, XRE family (NCBI) | compare |
| Rru_A3255 | | -0.5 | -2.2 | Protein of unknown function DUF214 (NCBI) | compare |
| Rru_A3172 | | -0.5 | -1.5 | Lysine exporter protein (LYSE/YGGA) (NCBI) | compare |
| Rru_A0770 | | -0.5 | -4.3 | Peptidase M23B (NCBI) | compare |
| Rru_A3275 | | -0.5 | -1.8 | Hsp33 protein (NCBI) | compare |
| Rru_A3502 | | -0.5 | -0.6 | hypothetical protein (NCBI) | compare |
| Rru_A1593 | | -0.5 | -3.2 | Peptidase M50, putative membrane-associated zinc metallopeptidase (NCBI) | compare |
| Rru_A1607 | | -0.5 | -4.3 | 4-alpha-glucanotransferase (NCBI) | compare |
| Rru_A3139 | | -0.5 | -2.4 | Transcriptional Regulator, GntR family (NCBI) | compare |
| Rru_A2478 | | -0.5 | -3.4 | ArgK protein (NCBI) | compare |
| Rru_A1327 | | -0.5 | -2.2 | hypothetical protein (NCBI) | compare |
| Rru_A1691 | | -0.5 | -3.0 | Spermine synthase (NCBI) | compare |
| Rru_A1063 | | -0.5 | -0.9 | putative transcription regulator protein (NCBI) | compare |
| Rru_A2057 | | -0.5 | -0.8 | Molybdopterin-guanine dinucleotide biosynthesis MobB region (NCBI) | compare |
| Rru_A2141 | | -0.5 | -2.6 | Protein of unknown function DUF6, transmembrane (NCBI) | compare |
| Rru_A0096 | | -0.5 | -1.6 | Secretion protein HlyD (NCBI) | compare |
| Rru_A0712 | | -0.5 | -1.0 | Transcriptional Regulator, XRE family (NCBI) | compare |
| Rru_A3528 | | -0.5 | -2.1 | hypothetical protein (NCBI) | compare |
| Rru_A1536 | | -0.5 | -2.3 | UvrD/REP helicase (NCBI) | compare |
| Rru_A3752 | | -0.5 | -1.9 | Protein of unknown function DUF302 (NCBI) | compare |
| Rru_A0998 | | -0.5 | -2.1 | NifT/FixU (NCBI) | compare |
| Rru_A1086 | | -0.5 | -1.8 | hypothetical protein (RefSeq) | compare |
| Rru_A3627 | | -0.5 | -2.7 | Cobyrinic acid a,c-diamide synthase (NCBI) | compare |
| Rru_A2729 | | -0.5 | -1.7 | hypothetical protein (NCBI) | compare |
| Rru_A1890 | | -0.5 | -1.8 | hypothetical protein (NCBI) | compare |
| Rru_A2887 | | -0.5 | -1.0 | GreA/GreB family elongation factor (NCBI) | compare |
| Rru_A0605 | | -0.5 | -1.9 | hypothetical protein (NCBI) | compare |
| Rru_A2866 | | -0.5 | -3.0 | Ribosomal protein L11 methyltransferase (NCBI) | compare |
| Rru_A1891 | | -0.5 | -4.0 | Anthranilate synthase component I (NCBI) | compare |
| Rru_A2723 | | -0.5 | -1.2 | Rubrerythrin (NCBI) | compare |
| Rru_A1164 | | -0.5 | -0.9 | Peptidase M52, hydrogenase expression/formation protein (NCBI) | compare |
| Rru_A3467 | | -0.5 | -2.4 | Amidinotransferase (NCBI) | compare |
| Rru_A2986 | | -0.5 | -2.9 | Fumarate reductase/succinate dehydrogenase flavoprotein-like (NCBI) | compare |
| Rru_A2703 | | -0.5 | -2.6 | RNA methyltransferase TrmH, group 3 (NCBI) | compare |
| Rru_A3614 | | -0.5 | -1.6 | Maf-like protein (NCBI) | compare |
| Rru_A3558 | | -0.5 | -1.3 | Protein of unknown function UPF0005 (NCBI) | compare |
| Rru_A0323 | | -0.5 | -2.1 | 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) | compare |
| Rru_A0341 | | -0.5 | -0.9 | hypothetical protein (NCBI) | compare |
| Rru_A3676 | | -0.5 | -3.2 | TRAP dicarboxylate transporter, DctM subunit (NCBI) | compare |
| Rru_A0389 | | -0.5 | -1.1 | Antibiotic biosynthesis monooxygenase (NCBI) | compare |
| Rru_A2939 | | -0.5 | -1.6 | hypothetical protein (NCBI) | compare |
| Rru_A3532 | | -0.5 | -2.6 | UspA (NCBI) | compare |
| Rru_A1380 | | -0.5 | -0.8 | Acetyl-CoA C-acetyltransferase (NCBI) | compare |
| Rru_B0032 | | -0.5 | -1.8 | hypothetical protein (NCBI) | compare |
| Rru_A1138 | | -0.5 | -1.7 | ABC transporter component (NCBI) | compare |
| Rru_A3677 | | -0.5 | -1.4 | Tripartite ATP-independent periplasmic transporter, DctQ component (NCBI) | compare |
| Rru_A2183 | | -0.5 | -3.0 | NAD(P)(+) transhydrogenase (AB-specific) (NCBI) | compare |
| Rru_A3749 | | -0.5 | -2.0 | hypothetical protein (NCBI) | compare |
| Rru_A1411 | | -0.5 | -2.5 | Protein of unknown function DUF162 (NCBI) | compare |