Experiment set7IT084 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM D-glucosamine

200 most important genes:

  gene name fitness t score description  
MMP_RS03450 -6.3 -3.6 glycine synthesis protein GlyXS (from data) compare
MMP_RS07845 -6.1 -3.6 LL-diaminopimelate aminotransferase compare
MMP_RS01175 -5.8 -6.8 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS07345 -5.6 -11.3 glycine synthesis protein GlyXL (from data) compare
MMP_RS08720 -5.4 -2.9 4Fe-4S binding protein compare
MMP_RS04710 -5.4 -3.3 hypothetical protein compare
MMP_RS08715 -5.1 -3.6 formylmethanofuran dehydrogenase subunit B compare
MMP_RS05500 -5.0 -11.6 2-isopropylmalate synthase compare
MMP_RS01755 -4.9 -1.9 DUF2097 domain-containing protein compare
MMP_RS04445 -4.9 -14.8 P-II family nitrogen regulator compare
MMP_RS01500 -4.9 -4.6 CBS domain-containing protein compare
MMP_RS02675 -4.8 -6.1 hypothetical protein compare
MMP_RS02145 -4.8 -12.8 winged helix-turn-helix transcriptional regulator compare
MMP_RS08650 -4.7 -4.6 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS04440 -4.7 -15.8 nitrogenase iron protein compare
MMP_RS08210 -4.7 -4.6 phosphatidylglycerophosphatase A compare
MMP_RS08165 -4.6 -2.2 phosphoglycerate dehydrogenase compare
MMP_RS03315 -4.6 -3.0 ferrous iron transport protein A compare
MMP_RS06400 -4.6 -2.7 4Fe-4S binding protein compare
MMP_RS04455 -4.6 -24.4 nitrogenase subunit alpha compare
MMP_RS06475 -4.5 -7.4 FAD-dependent oxidoreductase compare
MMP_RS07185 -4.4 -16.0 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS07635 -4.4 -13.4 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS04465 -4.3 -21.4 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS04470 -4.3 -23.7 nitrogenase compare
MMP_RS04460 -4.3 -25.7 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS04450 -4.3 -17.8 P-II family nitrogen regulator compare
MMP_RS07730 -4.3 -3.6 pyruvate synthase subunit beta compare
MMP_RS02685 -4.3 -17.7 molybdate ABC transporter substrate-binding protein compare
MMP_RS01385 -4.2 -1.2 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS01020 -4.2 -2.0 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS01455 -4.2 -10.0 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS06730 -4.2 -4.2 phosphopantothenate/pantothenate synthetase compare
MMP_RS01325 -4.2 -3.6 dihydroneopterin aldolase family protein compare
MMP_RS06270 -4.2 -9.6 TIGR00300 family protein compare
MMP_RS01225 -4.1 -7.9 DUF5379 domain-containing protein compare
MMP_RS09020 -4.0 -3.4 hypothetical protein compare
MMP_RS07390 -4.0 -4.5 cell division protein FtsZ compare
MMP_RS00555 -3.9 -11.9 MFS transporter compare
MMP_RS06625 -3.9 -3.4 DNA primase compare
MMP_RS05930 -3.9 -4.9 3-isopropylmalate dehydratase large subunit compare
MMP_RS07355 -3.8 -1.8 transcription factor S compare
MMP_RS01610 -3.8 -5.0 hypothetical protein compare
MMP_RS01795 -3.8 -3.4 methanogenesis marker 6 protein compare
MMP_RS00040 -3.8 -5.2 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS08440 -3.8 -5.1 cell division protein SepF compare
MMP_RS02670 -3.8 -17.2 ATP-binding cassette domain-containing protein compare
MMP_RS03700 -3.7 -13.0 sodium:proton antiporter compare
MMP_RS07435 -3.7 -3.8 GMP synthase subunit A compare
MMP_RS06120 -3.7 -3.9 UPF0147 family protein compare
MMP_RS05250 -3.6 -3.6 NFYB/HAP3 family transcription factor subunit compare
MMP_RS03110 -3.6 -7.8 glycosyltransferase family 2 protein compare
MMP_RS02010 -3.5 -19.8 PHP domain-containing protein compare
MMP_RS03435 -3.5 -3.2 ketol-acid reductoisomerase compare
MMP_RS03025 -3.5 -9.0 molybdenum cofactor guanylyltransferase compare
MMP_RS02680 -3.4 -8.8 ABC transporter permease compare
MMP_RS04215 -3.4 -10.7 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS00455 -3.4 -14.9 orotate phosphoribosyltransferase-like protein compare
MMP_RS06725 -3.3 -13.7 hypothetical protein compare
MMP_RS02240 -3.2 -4.5 methanogenesis marker 7 protein compare
MMP_RS02730 -3.2 -18.6 ModD protein compare
MMP_RS06630 -3.2 -1.2 UPF0058 family protein compare
MMP_RS03445 -3.2 -1.9 methanogenesis marker 17 protein compare
MMP_RS06020 -3.1 -7.5 archaeoflavoprotein AfpA compare
MMP_RS07380 -3.1 -4.2 transcription elongation factor Spt5 compare
MMP_RS01005 -3.1 -2.7 riboflavin synthase compare
MMP_RS06975 -3.1 -3.0 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS06295 -3.1 -11.5 methanogenesis marker 14 protein compare
MMP_RS00695 -3.1 -1.6 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS08860 -3.1 -8.2 MinD/ParA family protein compare
MMP_RS07525 -3.1 -9.1 4Fe-4S binding protein compare
MMP_RS06375 -3.1 -5.1 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS07445 -3.0 -10.3 helix-turn-helix domain-containing protein compare
MMP_RS01875 -3.0 -14.6 N-acetyltransferase compare
MMP_RS05515 -3.0 -11.1 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS00685 -2.9 -6.7 2-phospho-L-lactate guanylyltransferase compare
MMP_RS01265 -2.9 -3.3 hypothetical protein compare
MMP_RS07200 -2.9 -9.1 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS06670 -2.9 -9.8 glucose-6-phosphate isomerase compare
MMP_RS07365 -2.9 -15.0 2-phosphoglycerate kinase compare
MMP_RS06315 -2.9 -1.5 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS07600 -2.8 -3.5 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS04090 -2.8 -4.3 hypothetical protein compare
MMP_RS08635 -2.8 -3.5 UbiA family prenyltransferase compare
MMP_RS04890 -2.8 -1.8 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS04585 -2.8 -12.6 AIR synthase related protein compare
MMP_RS05640 -2.8 -10.5 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS01885 -2.8 -14.8 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS07605 -2.8 -6.4 diadenylate cyclase compare
MMP_RS08645 -2.8 -12.0 UPF0179 family protein compare
MMP_RS02355 -2.8 -5.8 30S ribosomal protein S27ae compare
MMP_RS01800 -2.7 -6.7 TIGR00303 family protein compare
MMP_RS00375 -2.7 -13.3 ammonium transporter conserved
MMP_RS08500 -2.7 -9.5 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS03035 -2.7 -5.4 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS03580 -2.7 -5.1 signal recognition particle-docking protein FtsY compare
MMP_RS00915 -2.7 -12.0 DUF116 domain-containing protein compare
MMP_RS01880 -2.7 -13.0 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS07695 -2.6 -11.3 DUF3236 domain-containing protein compare
MMP_RS04780 -2.6 -4.7 ribonuclease P compare
MMP_RS06230 -2.6 -4.2 helix-turn-helix domain-containing protein compare
MMP_RS00735 -2.6 -6.1 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS06285 -2.6 -5.8 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS08435 -2.6 -4.7 Era-like GTP-binding protein compare
MMP_RS07075 -2.6 -5.0 phosphomannomutase/phosphoglucomutase compare
MMP_RS03960 -2.5 -1.9 hypothetical protein compare
MMP_RS06895 -2.5 -2.8 selenocysteine-specific translation elongation factor compare
MMP_RS07630 -2.5 -3.1 ATP-binding cassette domain-containing protein compare
MMP_RS05550 -2.5 -1.4 cation:proton antiporter compare
MMP_RS04850 -2.5 -19.9 UPF0254 family protein compare
MMP_RS07700 -2.5 -13.5 DUF1188 domain-containing protein compare
MMP_RS01900 -2.4 -15.8 hypothetical protein compare
MMP_RS05430 -2.4 -5.2 TIGR00288 family NYN domain-containing protein compare
MMP_RS06355 -2.4 -4.4 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS03600 -2.4 -2.7 triose-phosphate isomerase compare
MMP_RS01830 -2.4 -2.5 tRNA-Val compare
MMP_RS08300 -2.4 -2.1 metal-sulfur cluster assembly factor compare
MMP_RS04955 -2.4 -8.1 DNA topoisomerase I compare
MMP_RS04685 -2.4 -5.0 DUF126 domain-containing protein compare
MMP_RS00730 -2.4 -7.4 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS00725 -2.4 -8.8 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS05265 -2.4 -4.4 2-isopropylmalate synthase compare
MMP_RS01925 -2.3 -11.7 DUF1616 domain-containing protein compare
MMP_RS00300 -2.3 -1.2 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS07710 -2.3 -9.1 cell division protein FtsZ compare
MMP_RS03015 -2.3 -11.2 GTP 3' 8-cyclase MoaA compare
MMP_RS07420 -2.2 -8.7 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS00310 -2.2 -7.7 CBS domain-containing protein compare
MMP_RS00315 -2.2 -7.5 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS01890 -2.1 -5.9 nucleotide sugar dehydrogenase compare
MMP_RS02245 -2.1 -6.1 hypothetical protein compare
MMP_RS06940 -2.1 -3.6 polyprenyl diphosphate synthase compare
MMP_RS07735 -2.1 -1.7 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS00985 -2.1 -6.4 CDC48 family AAA ATPase compare
MMP_RS04900 -2.1 -16.3 hypothetical protein compare
MMP_RS05540 -2.1 -2.8 hypothetical protein compare
MMP_RS06855 -2.1 -11.3 hypothetical protein compare
MMP_RS03475 -2.1 -1.3 hypothetical protein compare
MMP_RS08155 -2.0 -7.7 hypothetical protein compare
MMP_RS01380 -2.0 -6.2 PHP domain-containing protein compare
MMP_RS07090 -2.0 -9.0 tRNA (adenine-N1)-methyltransferase compare
MMP_RS00320 -2.0 -3.3 class I SAM-dependent methyltransferase compare
MMP_RS01220 -2.0 -7.7 hypothetical protein compare
MMP_RS05425 -2.0 -5.6 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS02195 -2.0 -6.3 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS00515 -2.0 -1.3 DUF655 domain-containing protein compare
MMP_RS08790 -2.0 -3.0 translation initiation factor IF-2 subunit alpha compare
MMP_RS02900 -2.0 -1.0 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS04790 -2.0 -12.4 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS06395 -2.0 -6.2 ThiF family adenylyltransferase compare
MMP_RS00305 -1.9 -2.9 phosphoribosyl-ATP diphosphatase compare
MMP_RS02345 -1.9 -4.1 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS07005 -1.9 -1.1 4Fe-4S binding protein compare
MMP_RS08660 -1.9 -9.9 DHH family phosphoesterase compare
MMP_RS00810 -1.9 -10.4 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS01725 -1.9 -7.1 class I SAM-dependent methyltransferase family protein compare
MMP_RS00520 -1.9 -2.8 RNA polymerase Rpb4 family protein compare
MMP_RS02780 -1.9 -6.4 hypothetical protein compare
MMP_RS07575 -1.8 -5.2 RNA ligase partner protein compare
MMP_RS05925 -1.8 -6.0 small nuclear ribonucleoprotein compare
MMP_RS06885 -1.8 -4.2 50S ribosome-binding GTPase compare
MMP_RS07875 -1.8 -8.2 hypothetical protein compare
MMP_RS01700 -1.8 -1.2 dihydroxy-acid dehydratase compare
MMP_RS08195 -1.8 -8.8 hypothetical protein compare
MMP_RS05535 -1.8 -5.0 hypothetical protein compare
MMP_RS05345 -1.7 -7.7 hypothetical protein compare
MMP_RS01960 -1.6 -1.7 hypothetical protein compare
MMP_RS08855 -1.6 -9.5 hypothetical protein compare
MMP_RS01665 -1.6 -2.7 DUF2111 domain-containing protein compare
MMP_RS08460 -1.6 -2.8 proteasome-activating nucleotidase compare
MMP_RS08570 -1.6 -10.0 coenzyme F420-0:L-glutamate ligase compare
MMP_RS07820 -1.6 -5.1 UPF0104 family protein compare
MMP_RS08705 -1.6 -8.0 sulfopyruvate decarboxylase subunit beta compare
MMP_RS07545 -1.5 -1.7 HTH domain-containing protein compare
MMP_RS01445 -1.5 -6.8 hypothetical protein compare
MMP_RS00185 -1.5 -10.8 potassium channel protein compare
MMP_RS00720 -1.5 -7.9 metal-dependent hydrolase compare
MMP_RS03640 -1.5 -4.3 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS04615 -1.5 -5.4 PDGLE domain-containing protein compare
MMP_RS02165 -1.5 -7.6 tRNA-dihydrouridine synthase compare
MMP_RS01905 -1.5 -10.1 glycosyltransferase compare
MMP_RS08330 -1.5 -5.8 NADH-quinone oxidoreductase subunit H compare
MMP_RS01895 -1.5 -10.1 flippase compare
MMP_RS05555 -1.5 -2.0 DUF4040 domain-containing protein compare
MMP_RS02280 -1.5 -1.3 DUF211 domain-containing protein compare
MMP_RS06340 -1.4 -7.2 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS03080 -1.4 -3.7 universal stress protein compare
MMP_RS06350 -1.4 -7.4 HesA/MoeB/ThiF family protein compare
MMP_RS06840 -1.4 -1.4 DNA-directed RNA polymerase subunit N compare
MMP_RS05845 -1.4 -2.6 tRNA-intron lyase compare
MMP_RS01970 -1.4 -8.9 TIGR04279 domain-containing protein compare
MMP_RS05295 -1.4 -8.9 minichromosome maintenance protein MCM compare
MMP_RS01915 -1.4 -9.4 DUF354 domain-containing protein compare
MMP_RS03485 -1.4 -4.9 TIGR00267 family protein compare
MMP_RS02875 -1.3 -8.4 chorismate pyruvate-lyase family protein compare
MMP_RS06105 -1.3 -7.8 hydrogenase maturation peptidase HycI compare
MMP_RS04720 -1.3 -2.2 DedA family protein compare
MMP_RS07385 -1.3 -1.9 protein translocase SEC61 complex subunit gamma compare
MMP_RS02175 -1.3 -1.1 DUF1611 domain-containing protein compare
MMP_RS06175 -1.3 -4.5 winged helix-turn-helix transcriptional regulator compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source D-Glucosamine Hydrochloride in Methanococcus maripaludis S2

For nitrogen source D-Glucosamine Hydrochloride across organisms