Experiment set7IT083 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM D-glucosamine

200 most important genes:

  gene name fitness t score description  
MMP_RS05500 -5.5 -11.3 2-isopropylmalate synthase compare
MMP_RS03450 -5.2 -4.0 glycine synthesis protein GlyXS (from data) compare
MMP_RS08715 -4.9 -3.7 formylmethanofuran dehydrogenase subunit B compare
MMP_RS01795 -4.9 -3.1 methanogenesis marker 6 protein compare
MMP_RS07345 -4.6 -12.8 glycine synthesis protein GlyXL (from data) compare
MMP_RS06895 -4.6 -3.8 selenocysteine-specific translation elongation factor compare
MMP_RS04455 -4.6 -24.2 nitrogenase subunit alpha compare
MMP_RS01175 -4.5 -7.4 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS07635 -4.5 -12.4 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS02675 -4.4 -6.5 hypothetical protein compare
MMP_RS06400 -4.4 -2.7 4Fe-4S binding protein compare
MMP_RS02145 -4.4 -12.9 winged helix-turn-helix transcriptional regulator compare
MMP_RS04450 -4.4 -17.0 P-II family nitrogen regulator compare
MMP_RS04460 -4.4 -27.2 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS04440 -4.4 -17.1 nitrogenase iron protein compare
MMP_RS04465 -4.2 -22.5 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS01385 -4.2 -1.2 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS05930 -4.2 -4.8 3-isopropylmalate dehydratase large subunit compare
MMP_RS04470 -4.2 -25.4 nitrogenase compare
MMP_RS01455 -4.2 -13.7 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS00555 -4.2 -10.7 MFS transporter compare
MMP_RS04445 -4.1 -9.0 P-II family nitrogen regulator compare
MMP_RS02240 -4.0 -5.3 methanogenesis marker 7 protein compare
MMP_RS06730 -3.9 -3.9 phosphopantothenate/pantothenate synthetase compare
MMP_RS02685 -3.9 -20.9 molybdate ABC transporter substrate-binding protein compare
MMP_RS03435 -3.9 -3.0 ketol-acid reductoisomerase compare
MMP_RS03035 -3.9 -6.5 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS06475 -3.9 -8.8 FAD-dependent oxidoreductase compare
MMP_RS01830 -3.9 -2.7 tRNA-Val compare
MMP_RS02900 -3.9 -1.1 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS07185 -3.9 -18.1 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS01005 -3.9 -2.6 riboflavin synthase compare
MMP_RS04710 -3.8 -3.7 hypothetical protein compare
MMP_RS03700 -3.8 -12.6 sodium:proton antiporter compare
MMP_RS02680 -3.8 -8.7 ABC transporter permease compare
MMP_RS07845 -3.8 -4.0 LL-diaminopimelate aminotransferase compare
MMP_RS07390 -3.8 -4.3 cell division protein FtsZ compare
MMP_RS02670 -3.8 -19.2 ATP-binding cassette domain-containing protein compare
MMP_RS04685 -3.8 -5.5 DUF126 domain-containing protein compare
MMP_RS06120 -3.7 -4.0 UPF0147 family protein compare
MMP_RS06020 -3.7 -8.9 archaeoflavoprotein AfpA compare
MMP_RS06375 -3.6 -8.8 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS07730 -3.6 -3.7 pyruvate synthase subunit beta compare
MMP_RS03960 -3.6 -2.0 hypothetical protein compare
MMP_RS04215 -3.6 -9.6 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS02010 -3.6 -16.4 PHP domain-containing protein compare
MMP_RS02355 -3.6 -5.4 30S ribosomal protein S27ae compare
MMP_RS01610 -3.6 -6.0 hypothetical protein compare
MMP_RS08650 -3.5 -5.3 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS08720 -3.5 -3.5 4Fe-4S binding protein compare
MMP_RS08165 -3.5 -4.6 phosphoglycerate dehydrogenase compare
MMP_RS03600 -3.5 -4.0 triose-phosphate isomerase compare
MMP_RS06625 -3.4 -3.4 DNA primase compare
MMP_RS04780 -3.4 -6.1 ribonuclease P compare
MMP_RS03015 -3.4 -11.8 GTP 3' 8-cyclase MoaA compare
MMP_RS08790 -3.4 -4.4 translation initiation factor IF-2 subunit alpha compare
MMP_RS06725 -3.4 -14.7 hypothetical protein compare
MMP_RS01265 -3.3 -3.0 hypothetical protein compare
MMP_RS08300 -3.3 -2.2 metal-sulfur cluster assembly factor compare
MMP_RS05515 -3.3 -16.3 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS00040 -3.3 -5.3 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS06270 -3.3 -7.4 TIGR00300 family protein compare
MMP_RS00300 -3.3 -1.3 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS06355 -3.2 -4.9 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS01800 -3.2 -7.2 TIGR00303 family protein compare
MMP_RS03025 -3.2 -10.0 molybdenum cofactor guanylyltransferase compare
MMP_RS06285 -3.2 -5.4 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS07200 -3.1 -9.9 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS05265 -3.1 -3.7 2-isopropylmalate synthase compare
MMP_RS03315 -3.1 -2.7 ferrous iron transport protein A compare
MMP_RS01500 -3.1 -4.5 CBS domain-containing protein compare
MMP_RS03580 -3.1 -6.9 signal recognition particle-docking protein FtsY compare
MMP_RS07525 -3.1 -9.0 4Fe-4S binding protein compare
MMP_RS00455 -3.1 -13.8 orotate phosphoribosyltransferase-like protein compare
MMP_RS07445 -3.1 -11.0 helix-turn-helix domain-containing protein compare
MMP_RS05550 -3.1 -1.5 cation:proton antiporter compare
MMP_RS08635 -3.1 -3.7 UbiA family prenyltransferase compare
MMP_RS03110 -3.0 -10.5 glycosyltransferase family 2 protein compare
MMP_RS07380 -3.0 -3.4 transcription elongation factor Spt5 compare
MMP_RS05250 -3.0 -2.7 NFYB/HAP3 family transcription factor subunit compare
MMP_RS07605 -3.0 -7.0 diadenylate cyclase compare
MMP_RS06295 -3.0 -10.2 methanogenesis marker 14 protein compare
MMP_RS08500 -3.0 -7.1 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS04585 -2.9 -15.9 AIR synthase related protein compare
MMP_RS01755 -2.9 -2.9 DUF2097 domain-containing protein compare
MMP_RS01020 -2.9 -2.1 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS08435 -2.9 -4.7 Era-like GTP-binding protein compare
MMP_RS05845 -2.9 -4.0 tRNA-intron lyase compare
MMP_RS00735 -2.9 -4.8 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS07355 -2.9 -1.8 transcription factor S compare
MMP_RS00685 -2.8 -6.0 2-phospho-L-lactate guanylyltransferase compare
MMP_RS01225 -2.8 -9.7 DUF5379 domain-containing protein compare
MMP_RS01890 -2.7 -7.4 nucleotide sugar dehydrogenase compare
MMP_RS00305 -2.7 -3.6 phosphoribosyl-ATP diphosphatase compare
MMP_RS02730 -2.7 -13.7 ModD protein compare
MMP_RS01875 -2.7 -13.0 N-acetyltransferase compare
MMP_RS02345 -2.6 -5.8 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS04900 -2.6 -20.3 hypothetical protein compare
MMP_RS07600 -2.6 -4.8 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS01380 -2.6 -6.1 PHP domain-containing protein compare
MMP_RS01885 -2.6 -12.9 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS02245 -2.5 -6.2 hypothetical protein compare
MMP_RS07695 -2.5 -12.7 DUF3236 domain-containing protein compare
MMP_RS06630 -2.5 -1.4 UPF0058 family protein compare
MMP_RS08440 -2.5 -4.0 cell division protein SepF compare
MMP_RS07735 -2.5 -2.0 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS04850 -2.5 -19.0 UPF0254 family protein compare
MMP_RS01880 -2.5 -10.4 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS07005 -2.5 -1.2 4Fe-4S binding protein compare
MMP_RS06350 -2.4 -9.6 HesA/MoeB/ThiF family protein compare
MMP_RS07435 -2.4 -3.3 GMP synthase subunit A compare
MMP_RS06670 -2.4 -6.0 glucose-6-phosphate isomerase compare
MMP_RS05430 -2.4 -4.7 TIGR00288 family NYN domain-containing protein compare
MMP_RS00515 -2.4 -1.6 DUF655 domain-containing protein compare
MMP_RS06315 -2.4 -1.6 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS08645 -2.4 -11.8 UPF0179 family protein compare
MMP_RS07575 -2.4 -5.0 RNA ligase partner protein compare
MMP_RS07365 -2.4 -12.6 2-phosphoglycerate kinase compare
MMP_RS04890 -2.4 -1.8 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS05425 -2.3 -7.4 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS01325 -2.3 -3.7 dihydroneopterin aldolase family protein compare
MMP_RS00725 -2.3 -9.0 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS07075 -2.3 -5.2 phosphomannomutase/phosphoglucomutase compare
MMP_RS07700 -2.3 -13.6 DUF1188 domain-containing protein compare
MMP_RS00375 -2.3 -11.3 ammonium transporter conserved
MMP_RS01900 -2.2 -14.7 hypothetical protein compare
MMP_RS01220 -2.2 -9.1 hypothetical protein compare
MMP_RS04090 -2.2 -5.3 hypothetical protein compare
MMP_RS06395 -2.2 -6.1 ThiF family adenylyltransferase compare
MMP_RS08860 -2.2 -5.5 MinD/ParA family protein compare
MMP_RS00750 -2.1 -2.9 fumarate hydratase compare
MMP_RS03640 -2.1 -6.0 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS07420 -2.1 -7.0 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS00730 -2.1 -9.4 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS01700 -2.1 -1.4 dihydroxy-acid dehydratase compare
MMP_RS01725 -2.1 -7.8 class I SAM-dependent methyltransferase family protein compare
MMP_RS07710 -2.1 -10.1 cell division protein FtsZ compare
MMP_RS04790 -2.1 -12.7 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS08210 -2.0 -4.6 phosphatidylglycerophosphatase A compare
MMP_RS04955 -2.0 -7.6 DNA topoisomerase I compare
MMP_RS01665 -2.0 -3.5 DUF2111 domain-containing protein compare
MMP_RS06855 -2.0 -10.2 hypothetical protein compare
MMP_RS02280 -2.0 -1.6 DUF211 domain-containing protein compare
MMP_RS06230 -2.0 -3.7 helix-turn-helix domain-containing protein compare
MMP_RS00985 -2.0 -6.5 CDC48 family AAA ATPase compare
MMP_RS05345 -2.0 -8.3 hypothetical protein compare
MMP_RS00310 -2.0 -7.5 CBS domain-containing protein compare
MMP_RS00520 -2.0 -3.0 RNA polymerase Rpb4 family protein compare
MMP_RS08155 -1.9 -8.6 hypothetical protein compare
MMP_RS06940 -1.9 -3.7 polyprenyl diphosphate synthase compare
MMP_RS00315 -1.9 -8.8 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS09020 -1.9 -1.8 hypothetical protein compare
MMP_RS03445 -1.9 -1.7 methanogenesis marker 17 protein compare
MMP_RS01925 -1.9 -9.1 DUF1616 domain-containing protein compare
MMP_RS07630 -1.9 -2.7 ATP-binding cassette domain-containing protein compare
MMP_RS05535 -1.9 -4.9 hypothetical protein compare
MMP_RS00915 -1.9 -8.6 DUF116 domain-containing protein compare
MMP_RS02195 -1.8 -5.9 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS07555 -1.8 -1.1 monovalent cation/H+ antiporter subunit E compare
MMP_RS07875 -1.8 -5.2 hypothetical protein compare
MMP_RS05540 -1.8 -2.8 hypothetical protein compare
MMP_RS01545 -1.8 -1.8 CBS domain-containing protein compare
MMP_RS06975 -1.8 -3.4 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS07755 -1.8 -2.2 DUF555 domain-containing protein compare
MMP_RS05640 -1.7 -7.3 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS07955 -1.7 -5.1 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS08460 -1.7 -4.1 proteasome-activating nucleotidase compare
MMP_RS08660 -1.7 -9.8 DHH family phosphoesterase compare
MMP_RS07705 -1.7 -9.9 transcriptional regulator compare
MMP_RS02780 -1.7 -6.2 hypothetical protein compare
MMP_RS01960 -1.7 -1.8 hypothetical protein compare
MMP_RS02800 -1.7 -8.2 nucleotidyltransferase domain-containing protein compare
MMP_RS05925 -1.7 -4.3 small nuclear ribonucleoprotein compare
MMP_RS07090 -1.7 -7.5 tRNA (adenine-N1)-methyltransferase compare
MMP_RS01895 -1.7 -10.6 flippase compare
MMP_RS00695 -1.6 -1.3 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS04720 -1.6 -3.1 DedA family protein compare
MMP_RS07535 -1.6 -7.2 4Fe-4S binding protein compare
MMP_RS00810 -1.6 -8.4 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS08745 -1.6 -6.6 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS08705 -1.6 -7.1 sulfopyruvate decarboxylase subunit beta compare
MMP_RS00110 -1.6 -4.4 hypothetical protein compare
MMP_RS02135 -1.6 -5.3 DUF5612 domain-containing protein compare
MMP_RS04615 -1.6 -3.7 PDGLE domain-containing protein compare
MMP_RS05555 -1.6 -2.5 DUF4040 domain-containing protein compare
MMP_RS03475 -1.6 -1.2 hypothetical protein compare
MMP_RS05920 -1.6 -0.6 50S ribosomal protein L37e compare
MMP_RS05295 -1.5 -10.7 minichromosome maintenance protein MCM compare
MMP_RS00320 -1.5 -2.7 class I SAM-dependent methyltransferase compare
MMP_RS00720 -1.5 -7.9 metal-dependent hydrolase compare
MMP_RS01975 -1.5 -10.2 hypothetical protein compare
MMP_RS02875 -1.5 -8.4 chorismate pyruvate-lyase family protein compare
MMP_RS02165 -1.4 -6.3 tRNA-dihydrouridine synthase compare
MMP_RS02340 -1.4 -2.1 DNA-directed RNA polymerase subunit E'' compare
MMP_RS07330 -1.4 -12.1 membrane protein compare
MMP_RS06525 -1.4 -2.1 YciI family protein compare
MMP_RS06885 -1.4 -3.0 50S ribosome-binding GTPase compare
MMP_RS02190 -1.4 -3.1 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS03485 -1.4 -4.2 TIGR00267 family protein compare
MMP_RS06105 -1.4 -7.3 hydrogenase maturation peptidase HycI compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source D-Glucosamine Hydrochloride in Methanococcus maripaludis S2

For nitrogen source D-Glucosamine Hydrochloride across organisms