Experiment set7IT079 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 2mM Adenosine

200 most important genes:

  gene name fitness t score description  
MMP_RS06325 -2.5 -1.0 hypothetical protein compare
MMP_RS06375 -2.5 -4.5 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS05675 -2.4 -2.0 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS02595 -2.3 -0.9 putative zinc-binding protein compare
MMP_RS01570 -2.2 -1.1 hypothetical protein compare
MMP_RS07600 -2.2 -1.3 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS08100 -2.1 -4.4 8-amino-7-oxononanoate synthase compare
MMP_RS02010 -2.0 -5.7 PHP domain-containing protein compare
MMP_RS02045 -2.0 -1.1 tRNA-Met compare
MMP_RS04215 -1.9 -4.6 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS05285 -1.9 -6.8 MMPL family transporter compare
MMP_RS05515 -1.9 -5.4 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS03965 -1.8 -1.4 hypothetical protein compare
MMP_RS03015 -1.8 -5.7 GTP 3' 8-cyclase MoaA compare
MMP_RS05500 -1.8 -5.5 2-isopropylmalate synthase compare
MMP_RS05835 -1.7 -0.5 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS01005 -1.7 -0.7 riboflavin synthase compare
MMP_RS04500 -1.7 -7.1 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS08340 -1.6 -2.6 4Fe-4S binding protein compare
MMP_RS06600 -1.6 -0.6 class III signal peptide-containing protein compare
MMP_RS08310 -1.5 -1.2 TMEM165/GDT1 family protein compare
MMP_RS08500 -1.5 -1.9 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS07185 -1.5 -5.7 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS07645 -1.5 -3.2 aldehyde dehydrogenase family protein compare
MMP_RS07635 -1.5 -3.9 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS06370 -1.5 -1.8 biotin synthase BioB compare
MMP_RS06895 -1.4 -0.7 selenocysteine-specific translation elongation factor compare
MMP_RS05550 -1.4 -0.4 cation:proton antiporter compare
MMP_RS01455 -1.4 -4.2 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS00375 -1.4 -4.6 ammonium transporter compare
MMP_RS06840 -1.4 -0.6 DNA-directed RNA polymerase subunit N compare
MMP_RS07195 -1.4 -3.7 M20 family metallo-hydrolase compare
MMP_RS03475 -1.4 -0.4 hypothetical protein compare
MMP_RS03960 -1.3 -0.5 hypothetical protein compare
MMP_RS06350 -1.3 -3.1 HesA/MoeB/ThiF family protein compare
MMP_RS01970 -1.3 -7.1 TIGR04279 domain-containing protein compare
MMP_RS07355 -1.2 -0.5 transcription factor S compare
MMP_RS08105 -1.2 -3.2 6-carboxyhexanoate--CoA ligase compare
MMP_RS03775 -1.2 -1.9 4Fe-4S dicluster domain-containing protein compare
MMP_RS03220 -1.2 -1.5 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS01175 -1.2 -2.6 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS00675 -1.2 -0.6 nitroreductase family protein compare
MMP_RS02370 -1.2 -2.6 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS08350 -1.2 -0.5 hypothetical protein compare
MMP_RS00545 -1.2 -2.6 XRE family transcriptional regulator compare
MMP_RS07725 -1.2 -1.7 4Fe-4S dicluster domain-containing protein compare
MMP_RS03065 -1.2 -1.3 AzlC family ABC transporter permease compare
MMP_RS07840 -1.2 -1.6 ribonuclease III compare
MMP_RS04050 -1.2 -2.4 hypothetical protein compare
MMP_RS06920 -1.1 -5.8 AAA family ATPase compare
MMP_RS01365 -1.1 -1.8 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS08570 -1.1 -4.7 coenzyme F420-0:L-glutamate ligase compare
MMP_RS02310 -1.1 -0.8 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMP_RS08195 -1.1 -4.3 hypothetical protein compare
MMP_RS07815 -1.1 -0.6 DUF2120 domain-containing protein compare
MMP_RS00300 -1.1 -0.3 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS08775 -1.1 -2.2 methanogenesis marker 9 domain-containing protein compare
MMP_RS07345 -1.1 -2.5 glycine synthesis protein GlyXL (from data) compare
MMP_RS05425 -1.1 -1.6 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS07765 -1.0 -3.8 sodium:alanine symporter family protein compare
MMP_RS05875 -1.0 -3.0 hydroxyethylthiazole kinase compare
MMP_RS03450 -1.0 -1.0 glycine synthesis protein GlyXS (from data) compare
MMP_RS04455 -1.0 -7.0 nitrogenase subunit alpha compare
MMP_RS07955 -1.0 -2.1 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS01765 -1.0 -3.2 HIT family protein compare
MMP_RS04875 -1.0 -2.1 energy-converting hydrogenase B subunit P compare
MMP_RS02280 -1.0 -0.4 DUF211 domain-containing protein compare
MMP_RS00380 -1.0 -2.7 P-II family nitrogen regulator compare
MMP_RS08095 -1.0 -2.3 dethiobiotin synthase compare
MMP_RS00315 -1.0 -2.3 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS01385 -1.0 -0.3 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS01220 -1.0 -2.9 hypothetical protein compare
MMP_RS08360 -1.0 -2.3 hypothetical protein compare
MMP_RS07555 -1.0 -0.3 monovalent cation/H+ antiporter subunit E compare
MMP_RS07620 -1.0 -2.2 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS01880 -1.0 -2.5 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS00730 -1.0 -2.6 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS06105 -1.0 -3.7 hydrogenase maturation peptidase HycI compare
MMP_RS04470 -1.0 -5.9 nitrogenase compare
MMP_RS08165 -1.0 -0.5 phosphoglycerate dehydrogenase compare
MMP_RS04460 -1.0 -6.7 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS01180 -0.9 -1.1 XTP/dITP diphosphatase compare
MMP_RS07705 -0.9 -3.4 transcriptional regulator compare
MMP_RS02605 -0.9 -0.5 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS06585 -0.9 -0.9 DMT family protein compare
MMP_RS02685 -0.9 -4.0 molybdate ABC transporter substrate-binding protein compare
MMP_RS03640 -0.9 -1.2 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS06335 -0.9 -2.1 HAD family hydrolase compare
MMP_RS01975 -0.9 -5.4 hypothetical protein compare
MMP_RS07540 -0.9 -1.6 CBS domain-containing protein compare
MMP_RS02965 -0.9 -2.1 carboxymuconolactone decarboxylase family protein compare
MMP_RS01380 -0.9 -1.3 PHP domain-containing protein compare
MMP_RS04790 -0.9 -4.1 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS05555 -0.9 -0.6 DUF4040 domain-containing protein compare
MMP_RS08370 -0.9 -0.2 cation:proton antiporter subunit C compare
MMP_RS00855 -0.8 -1.5 DUF367 family protein compare
MMP_RS00945 -0.8 -0.6 PadR family transcriptional regulator compare
MMP_RS05975 -0.8 -0.7 hypothetical protein compare
MMP_RS01155 -0.8 -2.2 XRE family transcriptional regulator compare
MMP_RS03145 -0.8 -2.4 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS07075 -0.8 -1.5 phosphomannomutase/phosphoglucomutase compare
MMP_RS01500 -0.8 -0.8 CBS domain-containing protein compare
MMP_RS01745 -0.8 -2.3 AMP phosphorylase compare
MMP_RS08860 -0.8 -1.7 MinD/ParA family protein compare
MMP_RS05280 -0.8 -3.9 COG1361 S-layer family protein compare
MMP_RS03390 -0.8 -2.2 malate dehydrogenase compare
MMP_RS00035 -0.8 -4.0 DUF2098 family protein compare
MMP_RS00295 -0.8 -0.9 gamma carbonic anhydrase family protein compare
MMP_RS05435 -0.8 -2.9 5'/3'-nucleotidase SurE compare
MMP_RS05110 -0.8 -2.6 16S ribosomal RNA methyltransferase A compare
MMP_RS00700 -0.8 -2.5 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS05950 -0.8 -3.2 nickel-dependent hydrogenase large subunit compare
MMP_RS06285 -0.8 -0.8 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS07525 -0.8 -2.9 4Fe-4S binding protein compare
MMP_RS05830 -0.8 -1.1 peptidyl-prolyl cis-trans isomerase compare
MMP_RS05290 -0.8 -2.5 TetR/AcrR family transcriptional regulator compare
MMP_RS02745 -0.8 -0.9 hypothetical protein compare
MMP_RS02175 -0.8 -0.3 DUF1611 domain-containing protein compare
MMP_RS06870 -0.8 -2.2 DedA family protein compare
MMP_RS01020 -0.8 -0.4 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS07790 -0.8 -3.4 segregation/condensation protein A compare
MMP_RS06270 -0.8 -1.4 TIGR00300 family protein compare
MMP_RS00990 -0.8 -1.9 hypothetical protein compare
MMP_RS03485 -0.8 -2.1 TIGR00267 family protein compare
MMP_RS04060 -0.7 -1.9 hypothetical protein compare
MMP_RS08335 -0.7 -2.0 NADH-quinone oxidoreductase subunit B family protein compare
MMP_RS07560 -0.7 -1.9 prefoldin subunit alpha compare
MMP_RS03490 -0.7 -0.7 DUF2115 domain-containing protein compare
MMP_RS01885 -0.7 -2.5 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS05985 -0.7 -1.0 hypothetical protein compare
MMP_RS01320 -0.7 -2.2 hypothetical protein compare
MMP_RS06915 -0.7 -2.2 metallophosphoesterase compare
MMP_RS03300 -0.7 -0.3 TOBE domain-containing protein compare
MMP_RS02355 -0.7 -0.8 30S ribosomal protein S27ae compare
MMP_RS01200 -0.7 -2.2 hypothetical protein compare
MMP_RS04450 -0.7 -3.7 P-II family nitrogen regulator compare
MMP_RS08400 -0.7 -1.4 MJ0307 family thioredoxin compare
MMP_RS05170 -0.7 -2.1 lysine exporter LysO family protein compare
MMP_RS03890 -0.7 -1.8 DUF2540 domain-containing protein compare
MMP_RS00130 -0.7 -0.5 nickel-responsive transcriptional regulator NikR compare
MMP_RS04190 -0.7 -1.8 hypothetical protein compare
MMP_RS04445 -0.7 -2.4 P-II family nitrogen regulator compare
MMP_RS02195 -0.7 -0.8 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS08200 -0.7 -4.3 archaeosine synthase subunit alpha compare
MMP_RS04145 -0.7 -0.6 hypothetical protein compare
MMP_RS02985 -0.7 -1.3 hypothetical protein compare
MMP_RS01830 -0.7 -0.5 tRNA-Val compare
MMP_RS07710 -0.7 -2.4 cell division protein FtsZ compare
MMP_RS03150 -0.7 -3.1 phosphoglycerate mutase compare
MMP_RS08355 -0.7 -1.7 Na(+)/H(+) antiporter subunit B compare
MMP_RS02680 -0.7 -2.1 ABC transporter permease compare
MMP_RS08225 -0.7 -2.9 RimK family alpha-L-glutamate ligase compare
MMP_RS02670 -0.7 -3.0 ATP-binding cassette domain-containing protein compare
MMP_RS07095 -0.7 -1.4 PspC domain-containing protein compare
MMP_RS01620 -0.7 -1.4 hypothetical protein compare
MMP_RS05640 -0.6 -1.6 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS09020 -0.6 -0.5 hypothetical protein compare
MMP_RS06670 -0.6 -1.3 glucose-6-phosphate isomerase compare
MMP_RS02390 -0.6 -1.8 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS04465 -0.6 -4.2 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS02300 -0.6 -1.6 NAD(P)H-dependent oxidoreductase compare
MMP_RS06770 -0.6 -2.4 DHH family phosphoesterase compare
MMP_RS03800 -0.6 -1.1 hypothetical protein compare
MMP_RS04595 -0.6 -1.7 hypothetical protein compare
MMP_RS01225 -0.6 -1.5 DUF5379 domain-containing protein compare
MMP_RS02815 -0.6 -0.9 hypothetical protein compare
MMP_RS08445 -0.6 -1.2 DUF2099 family protein compare
MMP_RS02675 -0.6 -0.9 hypothetical protein compare
MMP_RS06130 -0.6 -1.1 peptidylprolyl isomerase compare
MMP_RS00155 -0.6 -1.5 heavy metal-binding domain-containing protein compare
MMP_RS07735 -0.6 -0.3 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS01915 -0.6 -3.7 DUF354 domain-containing protein compare
MMP_RS01925 -0.6 -2.1 DUF1616 domain-containing protein compare
MMP_RS00685 -0.6 -1.0 2-phospho-L-lactate guanylyltransferase compare
MMP_RS05090 -0.6 -2.4 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS01675 -0.6 -0.6 hypothetical protein compare
MMP_RS08390 -0.6 -1.8 DUF5400 domain-containing protein compare
MMP_RS01875 -0.6 -2.6 N-acetyltransferase compare
MMP_RS07605 -0.6 -0.9 diadenylate cyclase compare
MMP_RS08215 -0.6 -1.0 DUF483 domain-containing protein compare
MMP_RS06340 -0.6 -1.9 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS03090 -0.6 -2.6 cation:proton antiporter compare
MMP_RS03140 -0.6 -3.0 hypothetical protein compare
MMP_RS03555 -0.6 -2.5 transcriptional regulator compare
MMP_RS03110 -0.6 -1.5 glycosyltransferase family 2 protein compare
MMP_RS06165 -0.6 -2.1 ABC transporter permease compare
MMP_RS00810 -0.6 -1.8 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS03020 -0.6 -1.7 peptidylprolyl isomerase compare
MMP_RS08715 -0.6 -0.4 formylmethanofuran dehydrogenase subunit B compare
MMP_RS06400 -0.6 -0.4 4Fe-4S binding protein compare
MMP_RS03445 -0.6 -0.3 methanogenesis marker 17 protein compare
MMP_RS02935 -0.6 -1.1 A24 family peptidase compare
MMP_RS07115 -0.6 -2.6 MBL fold metallo-hydrolase compare
MMP_RS03340 -0.6 -0.2 ABC transporter ATP-binding protein compare
MMP_RS02960 -0.6 -2.0 class I SAM-dependent methyltransferase family protein compare
MMP_RS06190 -0.6 -2.1 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMP_RS05795 -0.6 -1.0 redox-regulated ATPase YchF compare
MMP_RS06355 -0.6 -0.8 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS04620 -0.5 -2.1 cobalt transporter CbiM compare
MMP_RS02900 -0.5 -0.2 imidazoleglycerol-phosphate dehydratase HisB compare


Specific Phenotypes

For 4 genes in this experiment

For nitrogen source Adenosine in Methanococcus maripaludis S2

For nitrogen source Adenosine across organisms