Experiment set7IT075 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM Gly-Glu

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS06715 +1.9 12.2 cache domain-containing protein compare
MMP_RS06720 +1.7 6.4 response regulator transcription factor compare
MMP_RS03300 +1.6 1.8 TOBE domain-containing protein compare
MMP_RS05975 +1.5 3.1 hypothetical protein compare
MMP_RS04885 +1.4 9.6 sulfite exporter TauE/SafE family protein compare
MMP_RS00185 +1.3 9.2 potassium channel protein compare
MMP_RS02290 +1.2 5.4 MBL fold metallo-hydrolase compare
MMP_RS08320 +1.2 5.1 molybdopterin molybdotransferase MoeA compare
MMP_RS02885 +1.0 6.3 molybdopterin biosynthesis protein compare
MMP_RS00395 +1.0 2.0 MGMT family protein compare
MMP_RS00290 +0.9 4.3 hypothetical protein compare
MMP_RS00325 +0.9 1.5 RNA-binding protein compare
MMP_RS03390 +0.9 4.4 malate dehydrogenase compare
MMP_RS01570 +0.9 1.8 hypothetical protein compare
MMP_RS03340 +0.9 0.9 ABC transporter ATP-binding protein compare
MMP_RS07765 +0.9 5.0 sodium:alanine symporter family protein compare
MMP_RS08760 +0.8 2.8 hypothetical protein compare
MMP_RS00655 +0.8 2.6 hypothetical protein compare
MMP_RS01675 +0.8 1.7 hypothetical protein compare
MMP_RS06870 +0.8 3.4 DedA family protein compare
MMP_RS01525 +0.8 1.8 nucleoside-diphosphate kinase compare
MMP_RS00660 +0.8 6.0 alkaline phosphatase family protein compare
MMP_RS06540 +0.8 2.4 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS05675 +0.8 1.4 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS00855 +0.8 4.2 DUF367 family protein compare
MMP_RS05695 +0.7 4.8 phospholipase D-like domain-containing protein compare
MMP_RS01630 +0.7 3.6 N-glycosylase/DNA lyase compare
MMP_RS08485 +0.7 4.1 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS07915 +0.7 4.0 DUF4870 domain-containing protein compare
MMP_RS06325 +0.7 1.2 hypothetical protein compare
MMP_RS01135 +0.7 4.1 molybdate ABC transporter substrate-binding protein compare
MMP_RS07960 +0.7 3.7 sugar phosphate isomerase/epimerase compare
MMP_RS00345 +0.6 3.2 DUF2666 domain-containing protein compare
MMP_RS06575 +0.6 1.8 fluoride efflux transporter CrcB compare
MMP_RS00085 +0.6 3.8 DNA cytosine methyltransferase compare
MMP_RS07815 +0.6 1.0 DUF2120 domain-containing protein compare
MMP_RS08410 +0.6 2.7 DUF169 domain-containing protein compare
MMP_RS08555 +0.6 2.0 hypothetical protein compare
MMP_RS08070 +0.6 2.7 DUF2096 domain-containing protein compare
MMP_RS00450 +0.6 1.2 4Fe-4S binding protein compare
MMP_RS00430 +0.6 1.4 hypothetical protein compare
MMP_RS08930 +0.6 1.3 hypothetical protein compare
MMP_RS08275 +0.6 2.9 hypothetical protein compare
MMP_RS04145 +0.6 1.2 hypothetical protein compare
MMP_RS00375 +0.6 3.1 ammonium transporter compare
MMP_RS03965 +0.6 1.5 hypothetical protein compare
MMP_RS08775 +0.5 1.9 methanogenesis marker 9 domain-containing protein compare
MMP_RS06910 +0.5 3.4 RlmF-related methyltransferase compare
MMP_RS06585 +0.5 1.2 DMT family protein compare
MMP_RS01055 +0.5 1.5 hypothetical protein compare
MMP_RS05110 +0.5 3.0 16S ribosomal RNA methyltransferase A compare
MMP_RS08670 +0.5 1.8 metallophosphoesterase compare
MMP_RS08310 +0.5 1.3 TMEM165/GDT1 family protein compare
MMP_RS08160 +0.5 2.9 EamA family transporter compare
MMP_RS07560 +0.5 2.5 prefoldin subunit alpha compare
MMP_RS03065 +0.5 1.8 AzlC family ABC transporter permease compare
MMP_RS07840 +0.5 1.8 ribonuclease III compare
MMP_RS05715 +0.5 2.3 hypothetical protein compare
MMP_RS06685 +0.5 3.0 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS01660 +0.5 1.7 hypothetical protein compare
MMP_RS05365 +0.5 1.2 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS08075 +0.5 2.5 DUF749 domain-containing protein compare
MMP_RS03220 +0.5 1.6 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS00950 +0.5 1.5 site-2 protease family protein compare
MMP_RS06345 +0.5 3.9 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS04165 +0.5 2.3 TetR/AcrR family transcriptional regulator compare
MMP_RS08455 +0.5 2.1 multiprotein bridging factor aMBF1 compare
MMP_RS01200 +0.5 1.6 hypothetical protein compare
MMP_RS08640 +0.5 3.1 TIM barrel protein compare
MMP_RS01145 +0.5 2.0 ABC transporter ATP-binding protein compare
MMP_RS01635 +0.5 2.6 thiamine pyrophosphate-dependent enzyme compare
MMP_RS07805 +0.5 2.4 ABC transporter permease compare
MMP_RS06735 +0.5 1.7 class I SAM-dependent rRNA methyltransferase compare
MMP_RS08750 +0.5 1.0 hypothetical protein compare
MMP_RS08285 +0.5 1.9 serine/threonine protein kinase compare
MMP_RS01640 +0.5 2.5 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMP_RS05970 +0.4 1.4 class II SORL domain-containing protein compare
MMP_RS06990 +0.4 1.3 CatB-related O-acetyltransferase compare
MMP_RS03385 +0.4 0.6 cation diffusion facilitator family transporter compare
MMP_RS08665 +0.4 3.1 hypothetical protein compare
MMP_RS00800 +0.4 3.2 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS06150 +0.4 2.3 hypothetical protein compare
MMP_RS08700 +0.4 2.2 hypothetical protein compare
MMP_RS06650 +0.4 2.3 glycoside hydrolase family 57 protein compare
MMP_RS00155 +0.4 2.2 heavy metal-binding domain-containing protein compare
MMP_RS01100 +0.4 0.8 ABC transporter ATP-binding protein compare
MMP_RS06570 +0.4 1.0 DUF190 domain-containing protein compare
MMP_RS04100 +0.4 1.5 hypothetical protein compare
MMP_RS04205 +0.4 2.1 carboxymuconolactone decarboxylase family protein compare
MMP_RS00385 +0.4 2.0 P-II family nitrogen regulator compare
MMP_RS00990 +0.4 1.2 hypothetical protein compare
MMP_RS07650 +0.4 3.0 TldD/PmbA family protein compare
MMP_RS05795 +0.4 1.1 redox-regulated ATPase YchF compare
MMP_RS06500 +0.4 2.7 ATP-binding protein compare
MMP_RS08480 +0.4 2.0 molybdate ABC transporter substrate-binding protein compare
MMP_RS00565 +0.4 2.4 CBS domain-containing protein compare
MMP_RS06860 +0.4 0.9 4Fe-4S binding protein compare
MMP_RS07335 +0.4 1.4 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMP_RS01130 +0.4 2.9 flavoprotein compare
MMP_RS06770 +0.4 2.1 DHH family phosphoesterase compare
MMP_RS01550 +0.4 1.9 DUF1624 domain-containing protein compare
MMP_RS06530 +0.4 1.1 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator compare
MMP_RS01785 +0.4 2.3 hypothetical protein compare
MMP_RS07150 +0.4 1.6 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS08835 +0.4 2.3 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS00630 +0.4 1.9 ECF transporter S component compare
MMP_RS04960 +0.4 2.9 cytochrome c biogenesis CcdA family protein compare
MMP_RS00400 +0.4 1.3 tributyrin esterase compare
MMP_RS06705 +0.4 1.5 formate/nitrite transporter family protein compare
MMP_RS08390 +0.4 1.5 DUF5400 domain-containing protein compare
MMP_RS00940 +0.4 1.8 daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein compare
MMP_RS01320 +0.4 1.1 hypothetical protein compare
MMP_RS01965 +0.4 1.4 DUF1616 domain-containing protein compare
MMP_RS06305 +0.4 1.9 transporter substrate-binding domain-containing protein compare
MMP_RS01065 +0.4 2.4 alpha/beta hydrolase compare
MMP_RS01120 +0.4 1.9 permease compare
MMP_RS08130 +0.4 2.3 IGHMBP2 family helicase compare
MMP_RS01620 +0.4 1.4 hypothetical protein compare
MMP_RS00650 +0.3 1.9 ABC transporter ATP-binding protein compare
MMP_RS01150 +0.3 1.5 aldo/keto reductase compare
MMP_RS05995 +0.3 2.3 FprA family A-type flavoprotein compare
MMP_RS02690 +0.3 2.3 FmdE family protein compare
MMP_RS07895 +0.3 1.2 cytochrome c compare
MMP_RS09065 +0.3 2.7 hypothetical protein compare
MMP_RS01855 +0.3 1.6 2-hydroxyacyl-CoA dehydratase family protein compare
MMP_RS02475 +0.3 0.7 hypothetical protein compare
MMP_RS00700 +0.3 1.4 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS01210 +0.3 1.6 sodium:solute symporter compare
MMP_RS08175 +0.3 2.2 7-cyano-7-deazaguanine synthase compare
MMP_RS06590 +0.3 0.8 GNAT family N-acetyltransferase compare
MMP_RS03100 +0.3 0.9 hypothetical protein compare
MMP_RS04530 +0.3 1.5 ABC transporter permease compare
MMP_RS07835 +0.3 1.2 TldD/PmbA family protein compare
MMP_RS05060 +0.3 2.3 AAA family ATPase compare
MMP_RS08265 +0.3 1.4 rubrerythrin compare
MMP_RS03150 +0.3 2.1 phosphoglycerate mutase compare
MMP_RS07775 +0.3 1.3 alanine dehydrogenase compare
MMP_RS01495 +0.3 1.8 TraB/GumN family protein compare
MMP_RS06280 +0.3 1.6 alpha-glucan family phosphorylase compare
MMP_RS02745 +0.3 0.7 hypothetical protein compare
MMP_RS08085 +0.3 2.0 hypothetical protein compare
MMP_RS03215 +0.3 2.3 MBL fold metallo-hydrolase compare
MMP_RS00435 +0.3 2.2 CPBP family intramembrane metalloprotease compare
MMP_RS08235 +0.3 1.6 hypothetical protein compare
MMP_RS08990 +0.3 1.4 hypothetical protein compare
MMP_RS08325 +0.3 1.7 hypothetical protein compare
MMP_RS02375 +0.3 2.0 hypothetical protein compare
MMP_RS02170 +0.3 1.5 CBS domain-containing protein compare
MMP_RS01090 +0.3 1.7 ABC transporter substrate-binding protein compare
MMP_RS07100 +0.3 2.0 hypothetical protein compare
MMP_RS02705 +0.3 1.2 formylmethanofuran dehydrogenase subunit B compare
MMP_RS02385 +0.3 1.2 ATP-binding protein compare
MMP_RS00130 +0.3 0.4 nickel-responsive transcriptional regulator NikR compare
MMP_RS07590 +0.3 1.8 hypothetical protein compare
MMP_RS08280 +0.3 0.8 proteasome assembly chaperone family protein compare
MMP_RS06190 +0.3 1.3 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
MMP_RS02595 +0.3 0.5 putative zinc-binding protein compare
MMP_RS00195 +0.3 2.5 DUF4013 domain-containing protein compare
MMP_RS02740 +0.3 0.8 hypothetical protein compare
MMP_RS00080 +0.3 1.2 RecB-family nuclease compare
MMP_RS04945 +0.3 1.1 hypothetical protein compare
MMP_RS00335 +0.3 0.9 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMP_RS01460 +0.3 1.2 hypothetical protein compare
MMP_RS07125 +0.3 1.1 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS04315 +0.3 1.9 corrinoid protein compare
MMP_RS03890 +0.3 1.1 DUF2540 domain-containing protein compare
MMP_RS04835 +0.3 1.5 chemotaxis protein CheC compare
MMP_RS07770 +0.3 1.1 alanine racemase compare
MMP_RS07985 +0.3 2.0 nitroreductase family protein compare
MMP_RS06335 +0.3 1.4 HAD family hydrolase compare
MMP_RS00795 +0.3 1.6 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS00120 +0.3 0.9 LysR family transcriptional regulator compare
MMP_RS07880 +0.3 1.1 AAA family ATPase compare
MMP_RS08090 +0.3 1.4 hypothetical protein compare
MMP_RS01250 +0.3 0.8 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS05985 +0.3 0.7 hypothetical protein compare
MMP_RS09050 +0.3 0.8 CAP domain-containing protein compare
MMP_RS08850 +0.3 2.1 hypothetical protein compare
MMP_RS08430 +0.3 1.1 HAD family hydrolase compare
MMP_RS02415 +0.3 0.5 site-specific integrase compare
MMP_RS05490 +0.3 0.6 IMPACT family protein compare
MMP_RS00540 +0.3 1.0 PLP-dependent aminotransferase family protein compare
MMP_RS02995 +0.3 1.0 acyl-CoA thioesterase compare
MMP_RS01095 +0.3 1.2 iron ABC transporter permease compare
MMP_RS06065 +0.3 2.0 iron ABC transporter substrate-binding protein compare
MMP_RS08475 +0.3 1.6 ABC transporter permease compare
MMP_RS08770 +0.2 1.0 hypothetical protein compare
MMP_RS07425 +0.2 1.0 GTP-binding protein compare
MMP_RS01060 +0.2 1.8 calcium/sodium antiporter compare
MMP_RS02495 +0.2 0.8 hypothetical protein compare
MMP_RS00975 +0.2 1.6 HD domain-containing protein compare
MMP_RS05830 +0.2 1.1 peptidyl-prolyl cis-trans isomerase compare
MMP_RS05450 +0.2 1.0 CoB--CoM heterodisulfide reductase subunit C compare
MMP_RS03655 +0.2 1.2 DUF1894 domain-containing protein compare
MMP_RS06660 +0.2 1.0 glycosyltransferase family 4 protein compare
MMP_RS03230 +0.2 1.0 flavodoxin family protein compare
MMP_RS02890 +0.2 1.4 TIGR00296 family protein compare
MMP_RS03740 +0.2 0.8 indolepyruvate oxidoreductase subunit beta compare
MMP_RS00960 +0.2 0.7 iron export ABC transporter permease subunit FetB compare
MMP_RS06300 +0.2 1.4 ABC transporter substrate-binding protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nitrogen source experiments

For nitrogen source Gly-Glu across organisms