Experiment set7IT074 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM Gly-Glu

200 most important genes:

  gene name fitness t score description  
MMP_RS04710 -5.5 -2.6 hypothetical protein compare
MMP_RS08720 -5.3 -2.0 4Fe-4S binding protein compare
MMP_RS02145 -4.6 -12.7 winged helix-turn-helix transcriptional regulator compare
MMP_RS01175 -4.5 -7.6 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS04440 -4.5 -16.6 nitrogenase iron protein compare
MMP_RS06400 -4.4 -2.1 4Fe-4S binding protein compare
MMP_RS04460 -4.3 -26.2 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS00555 -4.2 -11.0 MFS transporter compare
MMP_RS04455 -4.2 -25.5 nitrogenase subunit alpha compare
MMP_RS04445 -4.2 -9.9 P-II family nitrogen regulator compare
MMP_RS03035 -4.2 -5.7 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS02675 -4.1 -5.0 hypothetical protein compare
MMP_RS07845 -4.1 -2.5 LL-diaminopimelate aminotransferase compare
MMP_RS03315 -4.1 -1.8 ferrous iron transport protein A compare
MMP_RS04470 -3.9 -20.9 nitrogenase compare
MMP_RS02680 -3.9 -9.7 ABC transporter permease compare
MMP_RS04465 -3.9 -20.9 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS02900 -3.9 -0.7 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS02010 -3.9 -15.1 PHP domain-containing protein compare
MMP_RS02670 -3.8 -13.6 ATP-binding cassette domain-containing protein compare
MMP_RS04450 -3.8 -17.9 P-II family nitrogen regulator compare
MMP_RS02730 -3.8 -13.8 ModD protein compare
MMP_RS03435 -3.8 -2.3 ketol-acid reductoisomerase compare
MMP_RS08715 -3.8 -2.6 formylmethanofuran dehydrogenase subunit B compare
MMP_RS02685 -3.8 -16.6 molybdate ABC transporter substrate-binding protein compare
MMP_RS06625 -3.7 -2.5 DNA primase compare
MMP_RS01980 -3.7 -18.6 trimeric intracellular cation channel family protein compare
MMP_RS07525 -3.6 -11.5 4Fe-4S binding protein compare
MMP_RS02240 -3.6 -4.1 methanogenesis marker 7 protein compare
MMP_RS01005 -3.6 -1.9 riboflavin synthase compare
MMP_RS00040 -3.6 -7.8 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS07075 -3.5 -6.3 phosphomannomutase/phosphoglucomutase compare
MMP_RS05250 -3.5 -2.5 NFYB/HAP3 family transcription factor subunit compare
MMP_RS07380 -3.5 -3.5 transcription elongation factor Spt5 compare
MMP_RS01020 -3.5 -1.5 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS05500 -3.5 -9.6 2-isopropylmalate synthase compare
MMP_RS03600 -3.4 -3.2 triose-phosphate isomerase compare
MMP_RS04790 -3.4 -17.9 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS01925 -3.4 -12.0 DUF1616 domain-containing protein compare
MMP_RS07390 -3.4 -3.5 cell division protein FtsZ compare
MMP_RS00515 -3.4 -0.9 DUF655 domain-containing protein compare
MMP_RS08300 -3.4 -1.5 metal-sulfur cluster assembly factor compare
MMP_RS06270 -3.4 -8.6 TIGR00300 family protein compare
MMP_RS03640 -3.3 -5.7 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS01900 -3.3 -17.1 hypothetical protein compare
MMP_RS00300 -3.3 -0.9 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS06725 -3.3 -13.5 hypothetical protein compare
MMP_RS04215 -3.3 -11.2 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS02245 -3.3 -4.5 hypothetical protein compare
MMP_RS07635 -3.3 -9.4 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS01380 -3.3 -7.3 PHP domain-containing protein compare
MMP_RS05265 -3.2 -3.2 2-isopropylmalate synthase compare
MMP_RS01385 -3.2 -0.8 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS00455 -3.2 -8.7 orotate phosphoribosyltransferase-like protein compare
MMP_RS03110 -3.2 -9.8 glycosyltransferase family 2 protein compare
MMP_RS02355 -3.2 -4.5 30S ribosomal protein S27ae compare
MMP_RS01455 -3.2 -10.2 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS07005 -3.2 -0.8 4Fe-4S binding protein compare
MMP_RS08790 -3.2 -3.0 translation initiation factor IF-2 subunit alpha compare
MMP_RS07730 -3.2 -2.7 pyruvate synthase subunit beta compare
MMP_RS01755 -3.1 -2.0 DUF2097 domain-containing protein compare
MMP_RS06285 -3.1 -3.3 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS06375 -3.1 -6.4 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS00915 -3.0 -8.5 DUF116 domain-containing protein compare
MMP_RS03580 -3.0 -4.0 signal recognition particle-docking protein FtsY compare
MMP_RS07600 -3.0 -4.0 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS07355 -3.0 -1.2 transcription factor S compare
MMP_RS06475 -3.0 -7.0 FAD-dependent oxidoreductase compare
MMP_RS07365 -3.0 -14.1 2-phosphoglycerate kinase compare
MMP_RS07185 -2.9 -15.9 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS08440 -2.9 -3.9 cell division protein SepF compare
MMP_RS01220 -2.9 -10.5 hypothetical protein compare
MMP_RS08435 -2.9 -3.2 Era-like GTP-binding protein compare
MMP_RS01795 -2.9 -2.1 methanogenesis marker 6 protein compare
MMP_RS08860 -2.9 -5.6 MinD/ParA family protein compare
MMP_RS03475 -2.9 -1.0 hypothetical protein compare
MMP_RS07735 -2.9 -1.3 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS08165 -2.9 -3.2 phosphoglycerate dehydrogenase compare
MMP_RS06885 -2.9 -3.7 50S ribosome-binding GTPase compare
MMP_RS07445 -2.8 -8.0 helix-turn-helix domain-containing protein compare
MMP_RS01610 -2.8 -3.2 hypothetical protein compare
MMP_RS06230 -2.8 -3.3 helix-turn-helix domain-containing protein compare
MMP_RS08635 -2.8 -2.7 UbiA family prenyltransferase compare
MMP_RS00985 -2.8 -6.4 CDC48 family AAA ATPase compare
MMP_RS06020 -2.8 -6.5 archaeoflavoprotein AfpA compare
MMP_RS06315 -2.8 -1.0 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS03700 -2.8 -9.3 sodium:proton antiporter compare
MMP_RS07435 -2.7 -2.8 GMP synthase subunit A compare
MMP_RS06295 -2.7 -9.2 methanogenesis marker 14 protein compare
MMP_RS01500 -2.7 -2.7 CBS domain-containing protein compare
MMP_RS03960 -2.7 -1.4 hypothetical protein compare
MMP_RS01885 -2.7 -8.3 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS03025 -2.7 -7.4 molybdenum cofactor guanylyltransferase compare
MMP_RS08650 -2.7 -3.9 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS07695 -2.7 -7.1 DUF3236 domain-containing protein compare
MMP_RS08195 -2.7 -11.2 hypothetical protein compare
MMP_RS05845 -2.7 -2.6 tRNA-intron lyase compare
MMP_RS08645 -2.7 -10.2 UPF0179 family protein compare
MMP_RS09020 -2.7 -1.8 hypothetical protein compare
MMP_RS01975 -2.6 -16.8 hypothetical protein compare
MMP_RS06395 -2.6 -3.9 ThiF family adenylyltransferase compare
MMP_RS01225 -2.6 -6.0 DUF5379 domain-containing protein compare
MMP_RS02195 -2.6 -4.4 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS01265 -2.6 -3.7 hypothetical protein compare
MMP_RS06855 -2.6 -12.0 hypothetical protein compare
MMP_RS06730 -2.5 -2.9 phosphopantothenate/pantothenate synthetase compare
MMP_RS04585 -2.5 -11.5 AIR synthase related protein compare
MMP_RS08210 -2.5 -2.7 phosphatidylglycerophosphatase A compare
MMP_RS00310 -2.5 -9.9 CBS domain-containing protein compare
MMP_RS07605 -2.5 -4.5 diadenylate cyclase compare
MMP_RS05555 -2.5 -1.9 DUF4040 domain-containing protein compare
MMP_RS08155 -2.5 -9.6 hypothetical protein compare
MMP_RS01880 -2.5 -7.3 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS05640 -2.5 -8.7 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS05920 -2.5 -0.5 50S ribosomal protein L37e compare
MMP_RS04870 -2.5 -6.6 TIGR02253 family HAD-type hydrolase compare
MMP_RS04090 -2.5 -3.4 hypothetical protein compare
MMP_RS01725 -2.5 -6.0 class I SAM-dependent methyltransferase family protein compare
MMP_RS06485 -2.5 -1.4 zinc ribbon domain-containing protein compare
MMP_RS07700 -2.4 -11.7 DUF1188 domain-containing protein compare
MMP_RS06670 -2.4 -6.9 glucose-6-phosphate isomerase compare
MMP_RS01830 -2.4 -1.9 tRNA-Val compare
MMP_RS01875 -2.4 -12.3 N-acetyltransferase compare
MMP_RS02175 -2.4 -1.1 DUF1611 domain-containing protein compare
MMP_RS05430 -2.4 -5.9 TIGR00288 family NYN domain-containing protein compare
MMP_RS01915 -2.4 -14.2 DUF354 domain-containing protein compare
MMP_RS00725 -2.4 -9.3 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS00695 -2.4 -1.2 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS07535 -2.4 -11.4 4Fe-4S binding protein compare
MMP_RS08500 -2.3 -4.9 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS03445 -2.3 -1.2 methanogenesis marker 17 protein compare
MMP_RS07200 -2.3 -6.9 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS05930 -2.3 -3.0 3-isopropylmalate dehydratase large subunit compare
MMP_RS04900 -2.3 -14.0 hypothetical protein compare
MMP_RS06120 -2.3 -2.6 UPF0147 family protein compare
MMP_RS02800 -2.3 -7.5 nucleotidyltransferase domain-containing protein compare
MMP_RS08570 -2.2 -11.2 coenzyme F420-0:L-glutamate ligase compare
MMP_RS00810 -2.2 -6.9 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS04850 -2.2 -14.7 UPF0254 family protein compare
MMP_RS02340 -2.2 -2.3 DNA-directed RNA polymerase subunit E'' compare
MMP_RS01905 -2.2 -12.9 glycosyltransferase compare
MMP_RS07575 -2.1 -4.1 RNA ligase partner protein compare
MMP_RS04685 -2.1 -3.3 DUF126 domain-containing protein compare
MMP_RS01970 -2.1 -12.5 TIGR04279 domain-containing protein compare
MMP_RS05925 -2.1 -4.8 small nuclear ribonucleoprotein compare
MMP_RS01890 -2.1 -6.1 nucleotide sugar dehydrogenase compare
MMP_RS05540 -2.1 -3.5 hypothetical protein compare
MMP_RS02345 -2.1 -4.1 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS01800 -2.0 -4.1 TIGR00303 family protein compare
MMP_RS01910 -2.0 -10.8 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS08820 -2.0 -6.6 hypothetical protein compare
MMP_RS08705 -2.0 -7.3 sulfopyruvate decarboxylase subunit beta compare
MMP_RS00895 -2.0 -3.7 hypothetical protein compare
MMP_RS08330 -2.0 -5.0 NADH-quinone oxidoreductase subunit H compare
MMP_RS00750 -2.0 -2.6 fumarate hydratase compare
MMP_RS03090 -2.0 -7.8 cation:proton antiporter compare
MMP_RS00685 -2.0 -3.1 2-phospho-L-lactate guanylyltransferase compare
MMP_RS00305 -2.0 -2.2 phosphoribosyl-ATP diphosphatase compare
MMP_RS03205 -1.9 -1.9 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS04875 -1.9 -5.8 energy-converting hydrogenase B subunit P compare
MMP_RS01325 -1.9 -1.9 dihydroneopterin aldolase family protein compare
MMP_RS00115 -1.9 -10.6 radical SAM protein compare
MMP_RS05460 -1.9 -10.5 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS04780 -1.9 -3.5 ribonuclease P compare
MMP_RS05280 -1.9 -7.9 COG1361 S-layer family protein compare
MMP_RS00735 -1.9 -3.4 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS00520 -1.9 -2.2 RNA polymerase Rpb4 family protein compare
MMP_RS00730 -1.8 -3.8 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS07710 -1.8 -7.9 cell division protein FtsZ compare
MMP_RS05285 -1.8 -7.2 MMPL family transporter compare
MMP_RS02165 -1.8 -6.4 tRNA-dihydrouridine synthase compare
MMP_RS05425 -1.8 -4.4 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS02190 -1.8 -3.0 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS00900 -1.7 -2.1 50S ribosomal protein L39e compare
MMP_RS00315 -1.7 -5.4 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS07530 -1.7 -8.8 4Fe-4S binding protein compare
MMP_RS01955 -1.7 -2.6 hypothetical protein compare
MMP_RS01920 -1.7 -10.7 glycosyltransferase family 2 protein compare
MMP_RS03440 -1.7 -1.4 MoaD/ThiS family protein compare
MMP_RS04720 -1.6 -2.1 DedA family protein compare
MMP_RS02780 -1.6 -6.3 hypothetical protein compare
MMP_RS03420 -1.6 -3.8 acetolactate synthase small subunit compare
MMP_RS04890 -1.6 -0.8 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS04955 -1.6 -6.6 DNA topoisomerase I compare
MMP_RS06940 -1.6 -3.2 polyprenyl diphosphate synthase compare
MMP_RS01445 -1.6 -6.2 hypothetical protein compare
MMP_RS06895 -1.6 -1.7 selenocysteine-specific translation elongation factor compare
MMP_RS00035 -1.6 -5.0 DUF2098 family protein compare
MMP_RS06630 -1.6 -0.8 UPF0058 family protein compare
MMP_RS00720 -1.5 -7.9 metal-dependent hydrolase compare
MMP_RS07345 -1.5 -5.2 glycine synthesis protein GlyXL (from data) compare
MMP_RS02135 -1.5 -4.2 DUF5612 domain-containing protein compare
MMP_RS06310 -1.5 -4.8 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS06130 -1.5 -3.4 peptidylprolyl isomerase compare
MMP_RS06925 -1.5 -2.5 ribonuclease VapC4 compare
MMP_RS06900 -1.5 -2.9 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS01195 -1.5 -1.3 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS06355 -1.5 -1.7 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS08785 -1.5 -1.0 RNA-protein complex protein Nop10 compare
MMP_RS04500 -1.5 -10.4 adenosylmethionine--8-amino-7-oxononanoate transaminase compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source Gly-Glu in Methanococcus maripaludis S2

For nitrogen source Gly-Glu across organisms