Experiment set7IT072 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM Gly-D-Asp

200 most important genes:

  gene name fitness t score description  
MMP_RS02145 -5.3 -9.5 winged helix-turn-helix transcriptional regulator compare
MMP_RS01020 -4.7 -1.5 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS04440 -4.7 -17.9 nitrogenase iron protein compare
MMP_RS01545 -4.6 -1.4 CBS domain-containing protein compare
MMP_RS08720 -4.6 -2.8 4Fe-4S binding protein compare
MMP_RS02240 -4.6 -5.9 methanogenesis marker 7 protein compare
MMP_RS04455 -4.5 -24.2 nitrogenase subunit alpha compare
MMP_RS04450 -4.4 -16.9 P-II family nitrogen regulator compare
MMP_RS04460 -4.3 -25.8 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS02680 -4.3 -9.8 ABC transporter permease compare
MMP_RS01005 -4.2 -1.9 riboflavin synthase compare
MMP_RS04465 -4.2 -22.0 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS02685 -4.2 -16.9 molybdate ABC transporter substrate-binding protein compare
MMP_RS01175 -4.2 -7.4 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS04710 -4.1 -2.9 hypothetical protein compare
MMP_RS04470 -4.1 -22.9 nitrogenase compare
MMP_RS07005 -4.1 -0.9 4Fe-4S binding protein compare
MMP_RS01610 -4.1 -6.0 hypothetical protein compare
MMP_RS02675 -4.0 -5.1 hypothetical protein compare
MMP_RS07845 -4.0 -3.4 LL-diaminopimelate aminotransferase compare
MMP_RS00555 -4.0 -12.9 MFS transporter compare
MMP_RS04445 -4.0 -10.5 P-II family nitrogen regulator compare
MMP_RS02010 -4.0 -17.2 PHP domain-containing protein compare
MMP_RS05500 -4.0 -14.2 2-isopropylmalate synthase compare
MMP_RS01500 -4.0 -3.8 CBS domain-containing protein compare
MMP_RS02670 -3.9 -16.8 ATP-binding cassette domain-containing protein compare
MMP_RS01380 -3.9 -8.0 PHP domain-containing protein compare
MMP_RS01795 -3.9 -2.7 methanogenesis marker 6 protein compare
MMP_RS03315 -3.8 -2.2 ferrous iron transport protein A compare
MMP_RS01225 -3.7 -7.7 DUF5379 domain-containing protein compare
MMP_RS07730 -3.7 -2.8 pyruvate synthase subunit beta compare
MMP_RS06400 -3.6 -2.3 4Fe-4S binding protein compare
MMP_RS01980 -3.6 -19.8 trimeric intracellular cation channel family protein compare
MMP_RS07185 -3.6 -15.2 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS04790 -3.6 -17.1 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS07525 -3.6 -8.8 4Fe-4S binding protein compare
MMP_RS01900 -3.5 -20.2 hypothetical protein compare
MMP_RS02730 -3.5 -15.5 ModD protein compare
MMP_RS05250 -3.5 -2.6 NFYB/HAP3 family transcription factor subunit compare
MMP_RS01925 -3.5 -15.5 DUF1616 domain-containing protein compare
MMP_RS07635 -3.4 -9.5 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS07605 -3.4 -5.3 diadenylate cyclase compare
MMP_RS07365 -3.4 -14.7 2-phosphoglycerate kinase compare
MMP_RS06725 -3.4 -14.2 hypothetical protein compare
MMP_RS02355 -3.4 -5.2 30S ribosomal protein S27ae compare
MMP_RS01455 -3.4 -7.9 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS08440 -3.4 -3.6 cell division protein SepF compare
MMP_RS03035 -3.4 -5.5 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS00455 -3.3 -13.1 orotate phosphoribosyltransferase-like protein compare
MMP_RS06625 -3.3 -3.1 DNA primase compare
MMP_RS08165 -3.3 -3.4 phosphoglycerate dehydrogenase compare
MMP_RS03110 -3.2 -8.4 glycosyltransferase family 2 protein compare
MMP_RS07355 -3.2 -1.4 transcription factor S compare
MMP_RS03025 -3.2 -7.1 molybdenum cofactor guanylyltransferase compare
MMP_RS07735 -3.2 -1.4 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS06475 -3.2 -7.9 FAD-dependent oxidoreductase compare
MMP_RS06270 -3.2 -6.1 TIGR00300 family protein compare
MMP_RS01755 -3.2 -1.7 DUF2097 domain-containing protein compare
MMP_RS03700 -3.1 -11.5 sodium:proton antiporter compare
MMP_RS02245 -3.1 -4.9 hypothetical protein compare
MMP_RS06120 -3.1 -3.6 UPF0147 family protein compare
MMP_RS07075 -3.1 -7.0 phosphomannomutase/phosphoglucomutase compare
MMP_RS00040 -3.1 -7.4 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS00915 -3.1 -10.1 DUF116 domain-containing protein compare
MMP_RS06730 -3.0 -2.1 phosphopantothenate/pantothenate synthetase compare
MMP_RS08650 -3.0 -4.8 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS03445 -3.0 -1.4 methanogenesis marker 17 protein compare
MMP_RS04585 -3.0 -13.8 AIR synthase related protein compare
MMP_RS00695 -3.0 -1.3 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS04215 -3.0 -8.1 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS05930 -2.9 -3.6 3-isopropylmalate dehydratase large subunit compare
MMP_RS07445 -2.9 -7.8 helix-turn-helix domain-containing protein compare
MMP_RS07380 -2.9 -3.8 transcription elongation factor Spt5 compare
MMP_RS08210 -2.9 -3.5 phosphatidylglycerophosphatase A compare
MMP_RS03640 -2.9 -4.5 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS03015 -2.8 -11.4 GTP 3' 8-cyclase MoaA compare
MMP_RS01800 -2.8 -5.3 TIGR00303 family protein compare
MMP_RS05515 -2.8 -9.2 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS08435 -2.8 -3.7 Era-like GTP-binding protein compare
MMP_RS00985 -2.8 -7.4 CDC48 family AAA ATPase compare
MMP_RS03960 -2.8 -1.5 hypothetical protein compare
MMP_RS06670 -2.8 -8.3 glucose-6-phosphate isomerase compare
MMP_RS07390 -2.8 -4.2 cell division protein FtsZ compare
MMP_RS05640 -2.8 -7.6 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS05265 -2.8 -2.4 2-isopropylmalate synthase compare
MMP_RS01265 -2.7 -2.8 hypothetical protein compare
MMP_RS02195 -2.7 -6.2 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS00515 -2.7 -1.1 DUF655 domain-containing protein compare
MMP_RS01955 -2.7 -5.4 hypothetical protein compare
MMP_RS05925 -2.6 -4.4 small nuclear ribonucleoprotein compare
MMP_RS01905 -2.6 -16.5 glycosyltransferase compare
MMP_RS08635 -2.6 -3.0 UbiA family prenyltransferase compare
MMP_RS05920 -2.5 -0.5 50S ribosomal protein L37e compare
MMP_RS07435 -2.5 -2.2 GMP synthase subunit A compare
MMP_RS05425 -2.5 -6.6 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS01975 -2.5 -17.2 hypothetical protein compare
MMP_RS06020 -2.5 -6.5 archaeoflavoprotein AfpA compare
MMP_RS07200 -2.5 -7.4 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS04900 -2.5 -19.4 hypothetical protein compare
MMP_RS06375 -2.5 -6.3 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS02800 -2.4 -9.1 nucleotidyltransferase domain-containing protein compare
MMP_RS08500 -2.4 -7.9 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS01880 -2.4 -7.2 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS04605 -2.4 -7.9 cobalt ECF transporter T component CbiQ compare
MMP_RS06285 -2.4 -4.0 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS03485 -2.4 -6.6 TIGR00267 family protein compare
MMP_RS03435 -2.4 -2.3 ketol-acid reductoisomerase compare
MMP_RS08715 -2.4 -2.9 formylmethanofuran dehydrogenase subunit B compare
MMP_RS08645 -2.4 -8.8 UPF0179 family protein compare
MMP_RS00685 -2.4 -4.3 2-phospho-L-lactate guanylyltransferase compare
MMP_RS06295 -2.4 -8.7 methanogenesis marker 14 protein compare
MMP_RS01960 -2.4 -1.3 hypothetical protein compare
MMP_RS07600 -2.4 -3.7 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS00810 -2.3 -8.6 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS01885 -2.3 -11.2 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS05550 -2.3 -1.1 cation:proton antiporter compare
MMP_RS07090 -2.3 -12.5 tRNA (adenine-N1)-methyltransferase compare
MMP_RS01700 -2.3 -1.0 dihydroxy-acid dehydratase compare
MMP_RS06355 -2.3 -4.0 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS06885 -2.3 -3.5 50S ribosome-binding GTPase compare
MMP_RS06895 -2.3 -2.3 selenocysteine-specific translation elongation factor compare
MMP_RS00310 -2.3 -8.1 CBS domain-containing protein compare
MMP_RS01875 -2.3 -10.0 N-acetyltransferase compare
MMP_RS09020 -2.3 -2.5 hypothetical protein compare
MMP_RS03600 -2.2 -3.1 triose-phosphate isomerase compare
MMP_RS08790 -2.2 -2.8 translation initiation factor IF-2 subunit alpha compare
MMP_RS00300 -2.2 -0.9 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS08860 -2.2 -6.1 MinD/ParA family protein compare
MMP_RS01725 -2.2 -4.3 class I SAM-dependent methyltransferase family protein compare
MMP_RS01830 -2.1 -1.7 tRNA-Val compare
MMP_RS04685 -2.1 -4.5 DUF126 domain-containing protein compare
MMP_RS06230 -2.1 -3.2 helix-turn-helix domain-containing protein compare
MMP_RS05460 -2.1 -12.3 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS07575 -2.1 -5.1 RNA ligase partner protein compare
MMP_RS04615 -2.1 -3.4 PDGLE domain-containing protein compare
MMP_RS08330 -2.1 -7.0 NADH-quinone oxidoreductase subunit H compare
MMP_RS06855 -2.1 -9.6 hypothetical protein compare
MMP_RS01915 -2.1 -12.6 DUF354 domain-containing protein compare
MMP_RS00305 -2.1 -2.5 phosphoribosyl-ATP diphosphatase compare
MMP_RS06925 -2.0 -3.0 ribonuclease VapC4 compare
MMP_RS02175 -2.0 -1.1 DUF1611 domain-containing protein compare
MMP_RS06315 -2.0 -1.2 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS05535 -2.0 -7.1 hypothetical protein compare
MMP_RS05555 -2.0 -2.1 DUF4040 domain-containing protein compare
MMP_RS05430 -2.0 -6.3 TIGR00288 family NYN domain-containing protein compare
MMP_RS07630 -2.0 -1.9 ATP-binding cassette domain-containing protein compare
MMP_RS00750 -2.0 -2.9 fumarate hydratase compare
MMP_RS01665 -2.0 -4.5 DUF2111 domain-containing protein compare
MMP_RS01970 -2.0 -12.7 TIGR04279 domain-containing protein compare
MMP_RS04955 -2.0 -7.5 DNA topoisomerase I compare
MMP_RS08195 -2.0 -9.0 hypothetical protein compare
MMP_RS03475 -1.9 -1.0 hypothetical protein compare
MMP_RS07750 -1.9 -5.8 DUF357 domain-containing protein compare
MMP_RS04090 -1.9 -3.2 hypothetical protein compare
MMP_RS00895 -1.9 -3.4 hypothetical protein compare
MMP_RS06350 -1.9 -5.1 HesA/MoeB/ThiF family protein compare
MMP_RS03400 -1.9 -3.3 archease compare
MMP_RS01220 -1.9 -7.8 hypothetical protein compare
MMP_RS04870 -1.9 -5.1 TIGR02253 family HAD-type hydrolase compare
MMP_RS06900 -1.9 -3.5 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS07535 -1.8 -8.2 4Fe-4S binding protein compare
MMP_RS00520 -1.8 -2.2 RNA polymerase Rpb4 family protein compare
MMP_RS02135 -1.8 -6.7 DUF5612 domain-containing protein compare
MMP_RS02345 -1.8 -2.9 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS07555 -1.8 -0.8 monovalent cation/H+ antiporter subunit E compare
MMP_RS01890 -1.8 -4.0 nucleotide sugar dehydrogenase compare
MMP_RS04620 -1.8 -9.2 cobalt transporter CbiM compare
MMP_RS00730 -1.8 -6.6 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS06105 -1.8 -9.5 hydrogenase maturation peptidase HycI compare
MMP_RS07545 -1.8 -1.4 HTH domain-containing protein compare
MMP_RS04720 -1.8 -2.8 DedA family protein compare
MMP_RS04780 -1.8 -3.5 ribonuclease P compare
MMP_RS08155 -1.8 -8.9 hypothetical protein compare
MMP_RS05845 -1.7 -2.2 tRNA-intron lyase compare
MMP_RS01910 -1.7 -9.6 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS07710 -1.7 -7.8 cell division protein FtsZ compare
MMP_RS07420 -1.7 -6.3 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS05540 -1.7 -2.3 hypothetical protein compare
MMP_RS03580 -1.7 -3.6 signal recognition particle-docking protein FtsY compare
MMP_RS07755 -1.7 -1.5 DUF555 domain-containing protein compare
MMP_RS07695 -1.6 -6.5 DUF3236 domain-containing protein compare
MMP_RS02165 -1.6 -8.4 tRNA-dihydrouridine synthase compare
MMP_RS02780 -1.6 -6.8 hypothetical protein compare
MMP_RS07700 -1.6 -8.8 DUF1188 domain-containing protein compare
MMP_RS02280 -1.6 -1.0 DUF211 domain-containing protein compare
MMP_RS05950 -1.5 -8.1 nickel-dependent hydrogenase large subunit compare
MMP_RS04850 -1.5 -11.2 UPF0254 family protein compare
MMP_RS07875 -1.5 -5.1 hypothetical protein compare
MMP_RS01385 -1.5 -0.7 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS03205 -1.5 -2.0 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS04890 -1.5 -1.2 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS07725 -1.5 -3.1 4Fe-4S dicluster domain-containing protein compare
MMP_RS02900 -1.5 -0.6 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS04875 -1.5 -5.3 energy-converting hydrogenase B subunit P compare
MMP_RS05440 -1.5 -8.4 winged helix-turn-helix transcriptional regulator compare
MMP_RS07955 -1.5 -5.5 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS06940 -1.5 -3.5 polyprenyl diphosphate synthase compare
MMP_RS05345 -1.4 -5.7 hypothetical protein compare
MMP_RS07530 -1.4 -8.5 4Fe-4S binding protein compare
MMP_RS05875 -1.4 -2.3 hydroxyethylthiazole kinase compare


Specific Phenotypes

For 1 genes in this experiment

For nitrogen source Gly-DL-Asp in Methanococcus maripaludis S2

For nitrogen source Gly-DL-Asp across organisms