Experiment set7IT066 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM Glycine

200 most important genes:

  gene name fitness t score description  
MMP_RS03315 -5.5 -1.9 ferrous iron transport protein A compare
MMP_RS04455 -5.2 -23.2 nitrogenase subunit alpha compare
MMP_RS04440 -5.2 -15.4 nitrogenase iron protein compare
MMP_RS01500 -5.1 -3.1 CBS domain-containing protein compare
MMP_RS02675 -5.0 -5.0 hypothetical protein compare
MMP_RS04445 -5.0 -15.0 P-II family nitrogen regulator compare
MMP_RS04465 -4.9 -20.6 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE compare
MMP_RS08715 -4.9 -2.7 formylmethanofuran dehydrogenase subunit B compare
MMP_RS04450 -4.8 -19.7 P-II family nitrogen regulator compare
MMP_RS00555 -4.7 -8.6 MFS transporter compare
MMP_RS01175 -4.6 -6.5 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS02145 -4.6 -12.5 winged helix-turn-helix transcriptional regulator compare
MMP_RS07845 -4.5 -2.9 LL-diaminopimelate aminotransferase compare
MMP_RS04460 -4.5 -24.5 nitrogenase molybdenum-iron protein subunit beta compare
MMP_RS00455 -4.5 -12.3 orotate phosphoribosyltransferase-like protein compare
MMP_RS08165 -4.5 -3.8 phosphoglycerate dehydrogenase compare
MMP_RS04470 -4.4 -21.8 nitrogenase compare
MMP_RS06625 -4.4 -3.1 DNA primase compare
MMP_RS01980 -4.3 -20.0 trimeric intracellular cation channel family protein compare
MMP_RS02245 -4.3 -5.0 hypothetical protein compare
MMP_RS07355 -4.3 -1.2 transcription factor S compare
MMP_RS03435 -4.3 -2.4 ketol-acid reductoisomerase compare
MMP_RS06730 -4.2 -2.7 phosphopantothenate/pantothenate synthetase compare
MMP_RS07635 -4.2 -9.5 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS01385 -4.1 -0.9 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS05500 -4.1 -12.1 2-isopropylmalate synthase compare
MMP_RS06725 -4.1 -16.5 hypothetical protein compare
MMP_RS02685 -4.0 -19.3 molybdate ABC transporter substrate-binding protein compare
MMP_RS07185 -4.0 -17.3 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS09020 -4.0 -2.5 hypothetical protein compare
MMP_RS02670 -3.9 -16.7 ATP-binding cassette domain-containing protein compare
MMP_RS02355 -3.9 -4.9 30S ribosomal protein S27ae compare
MMP_RS02010 -3.9 -12.9 PHP domain-containing protein compare
MMP_RS02900 -3.8 -0.8 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS05555 -3.8 -1.9 DUF4040 domain-containing protein compare
MMP_RS01610 -3.8 -5.0 hypothetical protein compare
MMP_RS06270 -3.8 -7.7 TIGR00300 family protein compare
MMP_RS07735 -3.8 -1.1 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS02680 -3.7 -11.1 ABC transporter permease compare
MMP_RS03600 -3.6 -3.4 triose-phosphate isomerase compare
MMP_RS04710 -3.6 -2.8 hypothetical protein compare
MMP_RS00040 -3.6 -6.5 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS07525 -3.6 -10.2 4Fe-4S binding protein compare
MMP_RS03035 -3.5 -5.7 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS06400 -3.5 -2.1 4Fe-4S binding protein compare
MMP_RS00515 -3.4 -1.0 DUF655 domain-containing protein compare
MMP_RS01545 -3.3 -1.5 CBS domain-containing protein compare
MMP_RS01005 -3.3 -2.1 riboflavin synthase compare
MMP_RS00300 -3.3 -0.9 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS01325 -3.2 -2.4 dihydroneopterin aldolase family protein compare
MMP_RS01455 -3.2 -5.3 nickel pincer cofactor biosynthesis protein LarC compare
MMP_RS06315 -3.2 -0.9 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS06475 -3.2 -6.0 FAD-dependent oxidoreductase compare
MMP_RS07005 -3.2 -0.9 4Fe-4S binding protein compare
MMP_RS06285 -3.2 -3.9 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS06120 -3.1 -3.5 UPF0147 family protein compare
MMP_RS04090 -3.1 -3.5 hypothetical protein compare
MMP_RS08435 -3.1 -3.1 Era-like GTP-binding protein compare
MMP_RS07380 -3.1 -3.3 transcription elongation factor Spt5 compare
MMP_RS07435 -3.1 -2.9 GMP synthase subunit A compare
MMP_RS05550 -3.1 -1.1 cation:proton antiporter compare
MMP_RS04890 -3.1 -1.3 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS02730 -3.1 -11.6 ModD protein compare
MMP_RS05930 -3.1 -3.7 3-isopropylmalate dehydratase large subunit compare
MMP_RS08720 -3.1 -2.5 4Fe-4S binding protein compare
MMP_RS02240 -3.1 -5.5 methanogenesis marker 7 protein compare
MMP_RS07075 -3.1 -6.3 phosphomannomutase/phosphoglucomutase compare
MMP_RS07605 -3.1 -4.1 diadenylate cyclase compare
MMP_RS01380 -3.0 -6.8 PHP domain-containing protein compare
MMP_RS01900 -3.0 -15.6 hypothetical protein compare
MMP_RS08860 -3.0 -5.8 MinD/ParA family protein compare
MMP_RS08500 -3.0 -8.0 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS00985 -3.0 -5.5 CDC48 family AAA ATPase compare
MMP_RS01020 -2.9 -1.5 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS07445 -2.9 -4.9 helix-turn-helix domain-containing protein compare
MMP_RS06895 -2.9 -2.8 selenocysteine-specific translation elongation factor compare
MMP_RS00305 -2.9 -2.8 phosphoribosyl-ATP diphosphatase compare
MMP_RS03110 -2.9 -8.3 glycosyltransferase family 2 protein compare
MMP_RS06375 -2.9 -4.1 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS01925 -2.9 -10.7 DUF1616 domain-containing protein compare
MMP_RS06350 -2.9 -5.5 HesA/MoeB/ThiF family protein compare
MMP_RS01265 -2.9 -2.5 hypothetical protein compare
MMP_RS08790 -2.9 -2.9 translation initiation factor IF-2 subunit alpha compare
MMP_RS05425 -2.9 -6.9 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS01830 -2.9 -2.1 tRNA-Val compare
MMP_RS06295 -2.8 -9.1 methanogenesis marker 14 protein compare
MMP_RS00915 -2.8 -7.7 DUF116 domain-containing protein compare
MMP_RS07390 -2.8 -3.7 cell division protein FtsZ compare
MMP_RS04585 -2.8 -11.4 AIR synthase related protein compare
MMP_RS03025 -2.8 -7.5 molybdenum cofactor guanylyltransferase compare
MMP_RS01795 -2.8 -2.2 methanogenesis marker 6 protein compare
MMP_RS01975 -2.8 -18.2 hypothetical protein compare
MMP_RS04870 -2.7 -8.8 TIGR02253 family HAD-type hydrolase compare
MMP_RS07730 -2.7 -2.8 pyruvate synthase subunit beta compare
MMP_RS04685 -2.7 -3.9 DUF126 domain-containing protein compare
MMP_RS05925 -2.7 -5.4 small nuclear ribonucleoprotein compare
MMP_RS01725 -2.7 -6.4 class I SAM-dependent methyltransferase family protein compare
MMP_RS02345 -2.7 -4.2 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS08440 -2.7 -3.7 cell division protein SepF compare
MMP_RS02800 -2.7 -8.4 nucleotidyltransferase domain-containing protein compare
MMP_RS04790 -2.7 -14.3 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS03960 -2.7 -1.5 hypothetical protein compare
MMP_RS07365 -2.7 -15.2 2-phosphoglycerate kinase compare
MMP_RS03700 -2.6 -11.4 sodium:proton antiporter compare
MMP_RS02175 -2.6 -1.1 DUF1611 domain-containing protein compare
MMP_RS01755 -2.6 -2.1 DUF2097 domain-containing protein compare
MMP_RS06230 -2.6 -3.2 helix-turn-helix domain-containing protein compare
MMP_RS01225 -2.6 -6.5 DUF5379 domain-containing protein compare
MMP_RS04900 -2.6 -18.0 hypothetical protein compare
MMP_RS00685 -2.5 -4.7 2-phospho-L-lactate guanylyltransferase compare
MMP_RS08645 -2.5 -9.0 UPF0179 family protein compare
MMP_RS05920 -2.5 -0.5 50S ribosomal protein L37e compare
MMP_RS08650 -2.5 -4.2 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS01960 -2.5 -1.2 hypothetical protein compare
MMP_RS05430 -2.5 -6.4 TIGR00288 family NYN domain-containing protein compare
MMP_RS08195 -2.5 -11.6 hypothetical protein compare
MMP_RS00810 -2.5 -7.4 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS00310 -2.5 -7.6 CBS domain-containing protein compare
MMP_RS06885 -2.5 -3.6 50S ribosome-binding GTPase compare
MMP_RS01800 -2.5 -4.8 TIGR00303 family protein compare
MMP_RS01905 -2.4 -14.9 glycosyltransferase compare
MMP_RS00750 -2.4 -2.8 fumarate hydratase compare
MMP_RS08635 -2.4 -2.4 UbiA family prenyltransferase compare
MMP_RS04215 -2.4 -5.4 nickel pincer cofactor biosynthesis protein LarB compare
MMP_RS06670 -2.3 -5.6 glucose-6-phosphate isomerase compare
MMP_RS07200 -2.3 -8.9 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS03015 -2.3 -7.5 GTP 3' 8-cyclase MoaA compare
MMP_RS01220 -2.3 -9.8 hypothetical protein compare
MMP_RS07695 -2.3 -8.8 DUF3236 domain-containing protein compare
MMP_RS00695 -2.3 -1.3 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS05515 -2.3 -9.8 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS04720 -2.2 -3.0 DedA family protein compare
MMP_RS01880 -2.2 -7.7 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS03640 -2.2 -3.5 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS04875 -2.2 -6.1 energy-converting hydrogenase B subunit P compare
MMP_RS08330 -2.2 -8.4 NADH-quinone oxidoreductase subunit H compare
MMP_RS06355 -2.2 -2.5 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS05250 -2.1 -2.0 NFYB/HAP3 family transcription factor subunit compare
MMP_RS01885 -2.1 -8.8 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS00730 -2.1 -5.4 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS02195 -2.1 -4.9 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS01875 -2.1 -10.6 N-acetyltransferase compare
MMP_RS04780 -2.1 -3.2 ribonuclease P compare
MMP_RS06940 -2.1 -4.1 polyprenyl diphosphate synthase compare
MMP_RS06395 -2.0 -3.4 ThiF family adenylyltransferase compare
MMP_RS05265 -2.0 -2.8 2-isopropylmalate synthase compare
MMP_RS01890 -2.0 -5.8 nucleotide sugar dehydrogenase compare
MMP_RS01970 -1.9 -12.3 TIGR04279 domain-containing protein compare
MMP_RS07535 -1.9 -8.5 4Fe-4S binding protein compare
MMP_RS06855 -1.9 -8.0 hypothetical protein compare
MMP_RS07600 -1.9 -3.3 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS01915 -1.9 -11.4 DUF354 domain-containing protein compare
MMP_RS05540 -1.9 -2.9 hypothetical protein compare
MMP_RS08155 -1.9 -7.1 hypothetical protein compare
MMP_RS01910 -1.9 -11.0 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS07555 -1.9 -0.8 monovalent cation/H+ antiporter subunit E compare
MMP_RS05460 -1.8 -10.0 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS04850 -1.8 -14.0 UPF0254 family protein compare
MMP_RS03475 -1.8 -0.9 hypothetical protein compare
MMP_RS00725 -1.8 -7.8 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS06975 -1.8 -2.6 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS02165 -1.8 -7.6 tRNA-dihydrouridine synthase compare
MMP_RS07090 -1.7 -6.8 tRNA (adenine-N1)-methyltransferase compare
MMP_RS07700 -1.7 -9.9 DUF1188 domain-containing protein compare
MMP_RS04605 -1.7 -4.6 cobalt ECF transporter T component CbiQ compare
MMP_RS03580 -1.7 -2.9 signal recognition particle-docking protein FtsY compare
MMP_RS00895 -1.7 -3.8 hypothetical protein compare
MMP_RS07630 -1.7 -1.8 ATP-binding cassette domain-containing protein compare
MMP_RS00735 -1.7 -4.2 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS08210 -1.7 -2.0 phosphatidylglycerophosphatase A compare
MMP_RS02780 -1.7 -6.1 hypothetical protein compare
MMP_RS05640 -1.6 -7.3 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS06020 -1.6 -4.0 archaeoflavoprotein AfpA compare
MMP_RS01955 -1.6 -3.5 hypothetical protein compare
MMP_RS00315 -1.6 -7.1 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS03445 -1.5 -1.1 methanogenesis marker 17 protein compare
MMP_RS07530 -1.5 -7.9 4Fe-4S binding protein compare
MMP_RS07755 -1.5 -1.4 DUF555 domain-containing protein compare
MMP_RS05875 -1.5 -2.6 hydroxyethylthiazole kinase compare
MMP_RS03090 -1.5 -5.5 cation:proton antiporter compare
MMP_RS07710 -1.5 -6.4 cell division protein FtsZ compare
MMP_RS02135 -1.5 -4.4 DUF5612 domain-containing protein compare
MMP_RS08820 -1.5 -4.7 hypothetical protein compare
MMP_RS07575 -1.5 -2.8 RNA ligase partner protein compare
MMP_RS06175 -1.5 -6.2 winged helix-turn-helix transcriptional regulator compare
MMP_RS03420 -1.5 -2.9 acetolactate synthase small subunit compare
MMP_RS03020 -1.5 -6.8 peptidylprolyl isomerase compare
MMP_RS05845 -1.5 -2.2 tRNA-intron lyase compare
MMP_RS00035 -1.4 -4.7 DUF2098 family protein compare
MMP_RS05765 -1.4 -6.3 M42 family metallopeptidase compare
MMP_RS01700 -1.4 -0.8 dihydroxy-acid dehydratase compare
MMP_RS01180 -1.4 -1.7 XTP/dITP diphosphatase compare
MMP_RS04615 -1.4 -2.6 PDGLE domain-containing protein compare
MMP_RS06105 -1.4 -6.5 hydrogenase maturation peptidase HycI compare
MMP_RS08660 -1.4 -6.2 DHH family phosphoesterase compare
MMP_RS08570 -1.3 -6.3 coenzyme F420-0:L-glutamate ligase compare
MMP_RS01540 -1.3 -2.2 DUF504 domain-containing protein compare
MMP_RS00520 -1.3 -1.4 RNA polymerase Rpb4 family protein compare
MMP_RS04955 -1.3 -5.0 DNA topoisomerase I compare
MMP_RS01920 -1.3 -9.0 glycosyltransferase family 2 protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nitrogen source experiments

For nitrogen source Glycine across organisms