Experiment set7IT064 for Methanococcus maripaludis S2

Compare to:

H2 N-free with 10mM Glycine

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS08320 +2.7 6.5 molybdopterin molybdotransferase MoeA compare
MMP_RS02885 +2.6 12.4 molybdopterin biosynthesis protein compare
MMP_RS06715 +2.6 16.4 cache domain-containing protein compare
MMP_RS06720 +2.4 11.3 response regulator transcription factor compare
MMP_RS07765 +2.3 12.2 sodium:alanine symporter family protein compare
MMP_RS03390 +2.3 8.6 malate dehydrogenase compare
MMP_RS04885 +2.1 13.4 sulfite exporter TauE/SafE family protein compare
MMP_RS08760 +1.7 5.4 hypothetical protein compare
MMP_RS08310 +1.7 3.5 TMEM165/GDT1 family protein compare
MMP_RS02045 +1.5 2.8 tRNA-Met compare
MMP_RS02290 +1.5 7.0 MBL fold metallo-hydrolase compare
MMP_RS00295 +1.4 2.3 gamma carbonic anhydrase family protein compare
MMP_RS05355 +1.4 1.4 hypothetical protein compare
MMP_RS07915 +1.3 5.1 DUF4870 domain-containing protein compare
MMP_RS00185 +1.3 8.6 potassium channel protein compare
MMP_RS00325 +1.2 2.2 RNA-binding protein compare
MMP_RS01280 +1.1 8.3 DUF515 domain-containing protein compare
MMP_RS08555 +1.1 2.2 hypothetical protein compare
MMP_RS00240 +1.0 6.0 type II secretion system F family protein compare
MMP_RS05110 +1.0 4.8 16S ribosomal RNA methyltransferase A compare
MMP_RS00430 +1.0 1.2 hypothetical protein compare
MMP_RS01290 +1.0 5.8 class III signal peptide-containing protein compare
MMP_RS01270 +1.0 5.8 prepilin peptidase compare
MMP_RS00675 +1.0 1.1 nitroreductase family protein compare
MMP_RS01525 +1.0 1.9 nucleoside-diphosphate kinase compare
MMP_RS03340 +1.0 0.8 ABC transporter ATP-binding protein compare
MMP_RS08675 +1.0 2.1 class III signal peptide-containing protein compare
MMP_RS06540 +0.9 2.4 3-methyl-2-oxobutanoate dehydrogenase subunit VorB compare
MMP_RS08410 +0.9 3.7 DUF169 domain-containing protein compare
MMP_RS01135 +0.9 4.7 molybdate ABC transporter substrate-binding protein compare
MMP_RS05975 +0.9 1.5 hypothetical protein compare
MMP_RS05695 +0.9 3.5 phospholipase D-like domain-containing protein compare
MMP_RS06685 +0.9 4.8 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS08665 +0.9 5.7 hypothetical protein compare
MMP_RS02410 +0.9 2.0 ABC transporter substrate-binding protein compare
MMP_RS03465 +0.9 1.1 adenine phosphoribosyltransferase compare
MMP_RS08700 +0.9 3.2 hypothetical protein compare
MMP_RS00250 +0.9 5.4 Flp pilus assembly complex ATPase component TadA compare
MMP_RS08370 +0.8 0.5 cation:proton antiporter subunit C compare
MMP_RS08275 +0.8 4.1 hypothetical protein compare
MMP_RS00245 +0.8 5.8 type II secretion system F family protein compare
MMP_RS06590 +0.8 2.0 GNAT family N-acetyltransferase compare
MMP_RS00660 +0.8 4.4 alkaline phosphatase family protein compare
MMP_RS08390 +0.8 2.5 DUF5400 domain-containing protein compare
MMP_RS01285 +0.7 4.2 hypothetical protein compare
MMP_RS00655 +0.7 1.5 hypothetical protein compare
MMP_RS03065 +0.7 1.0 AzlC family ABC transporter permease compare
MMP_RS03450 +0.7 1.6 glycine synthesis protein GlyXS (from data) compare
MMP_RS01305 +0.7 5.1 hypothetical protein compare
MMP_RS08485 +0.7 3.9 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS01570 +0.7 1.1 hypothetical protein compare
MMP_RS07560 +0.7 1.8 prefoldin subunit alpha compare
MMP_RS08455 +0.7 1.7 multiprotein bridging factor aMBF1 compare
MMP_RS06345 +0.7 3.4 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS05795 +0.7 1.7 redox-regulated ATPase YchF compare
MMP_RS03150 +0.7 3.5 phosphoglycerate mutase compare
MMP_RS03625 +0.7 3.4 cell wall-binding protein compare
MMP_RS01965 +0.7 1.4 DUF1616 domain-containing protein compare
MMP_RS06575 +0.7 2.7 fluoride efflux transporter CrcB compare
MMP_RS00375 +0.6 2.7 ammonium transporter compare
MMP_RS01310 +0.6 4.3 hypothetical protein compare
MMP_RS05175 +0.6 1.7 hypothetical protein compare
MMP_RS04205 +0.6 3.0 carboxymuconolactone decarboxylase family protein compare
MMP_RS08285 +0.6 2.4 serine/threonine protein kinase compare
MMP_RS08670 +0.6 1.9 metallophosphoesterase compare
MMP_RS06650 +0.6 2.4 glycoside hydrolase family 57 protein compare
MMP_RS06870 +0.6 2.3 DedA family protein compare
MMP_RS01495 +0.6 3.2 TraB/GumN family protein compare
MMP_RS02310 +0.6 0.9 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMP_RS00855 +0.6 2.2 DUF367 family protein compare
MMP_RS07805 +0.6 2.2 ABC transporter permease compare
MMP_RS04145 +0.6 0.9 hypothetical protein compare
MMP_RS05715 +0.6 2.2 hypothetical protein compare
MMP_RS07775 +0.6 1.7 alanine dehydrogenase compare
MMP_RS07615 +0.5 2.2 energy-coupling factor ABC transporter permease compare
MMP_RS06745 +0.5 1.0 DUF2119 domain-containing protein compare
MMP_RS07650 +0.5 3.5 TldD/PmbA family protein compare
MMP_RS06860 +0.5 1.0 4Fe-4S binding protein compare
MMP_RS01675 +0.5 0.9 hypothetical protein compare
MMP_RS01650 +0.5 0.5 sulfurtransferase TusA family protein compare
MMP_RS07960 +0.5 2.2 sugar phosphate isomerase/epimerase compare
MMP_RS03385 +0.5 0.6 cation diffusion facilitator family transporter compare
MMP_RS01785 +0.5 2.4 hypothetical protein compare
MMP_RS01660 +0.5 1.5 hypothetical protein compare
MMP_RS02390 +0.5 2.1 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS05675 +0.5 0.9 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS01055 +0.5 1.6 hypothetical protein compare
MMP_RS01635 +0.5 1.9 thiamine pyrophosphate-dependent enzyme compare
MMP_RS00345 +0.5 1.7 DUF2666 domain-containing protein compare
MMP_RS01200 +0.5 1.4 hypothetical protein compare
MMP_RS04060 +0.5 1.5 hypothetical protein compare
MMP_RS07900 +0.5 1.4 YeeE/YedE family protein compare
MMP_RS02605 +0.5 0.5 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS05800 +0.5 2.1 B12-binding domain-containing radical SAM protein compare
MMP_RS06660 +0.5 2.0 glycosyltransferase family 4 protein compare
MMP_RS07800 +0.5 2.1 ATP-binding cassette domain-containing protein compare
MMP_RS00155 +0.5 1.1 heavy metal-binding domain-containing protein compare
MMP_RS08640 +0.5 2.5 TIM barrel protein compare
MMP_RS03890 +0.5 1.5 DUF2540 domain-containing protein compare
MMP_RS01320 +0.5 1.9 hypothetical protein compare
MMP_RS09045 +0.5 2.7 class III signal peptide-containing protein compare
MMP_RS05470 +0.5 2.3 DUF523 and DUF1722 domain-containing protein compare
MMP_RS01295 +0.5 2.7 hypothetical protein compare
MMP_RS02000 +0.5 1.8 radical SAM protein compare
MMP_RS08130 +0.5 2.6 IGHMBP2 family helicase compare
MMP_RS07770 +0.5 1.6 alanine racemase compare
MMP_RS08260 +0.5 1.6 DUF99 family protein compare
MMP_RS05785 +0.5 3.0 ATP-binding protein compare
MMP_RS04305 +0.4 1.2 hypothetical protein compare
MMP_RS02425 +0.4 1.8 hypothetical protein compare
MMP_RS08245 +0.4 2.0 DUF4013 domain-containing protein compare
MMP_RS07880 +0.4 1.9 AAA family ATPase compare
MMP_RS06215 +0.4 0.9 30S ribosomal protein S6e compare
MMP_RS04735 +0.4 1.7 tautomerase family protein compare
MMP_RS00290 +0.4 1.2 hypothetical protein compare
MMP_RS06760 +0.4 1.4 hypothetical protein compare
MMP_RS00545 +0.4 0.9 XRE family transcriptional regulator compare
MMP_RS07835 +0.4 1.1 TldD/PmbA family protein compare
MMP_RS02385 +0.4 1.7 ATP-binding protein compare
MMP_RS04800 +0.4 2.0 chemotaxis protein CheW compare
MMP_RS04165 +0.4 1.1 TetR/AcrR family transcriptional regulator compare
MMP_RS01120 +0.4 1.7 permease compare
MMP_RS08160 +0.4 1.3 EamA family transporter compare
MMP_RS08075 +0.4 1.2 DUF749 domain-containing protein compare
MMP_RS06150 +0.4 2.0 hypothetical protein compare
MMP_RS01260 +0.4 1.3 HDIG domain-containing protein compare
MMP_RS04985 +0.4 2.0 DUF2180 family protein compare
MMP_RS01095 +0.4 1.1 iron ABC transporter permease compare
MMP_RS06325 +0.4 0.5 hypothetical protein compare
MMP_RS01100 +0.4 0.5 ABC transporter ATP-binding protein compare
MMP_RS06035 +0.4 1.8 glycosyltransferase family 2 protein compare
MMP_RS05780 +0.4 1.8 multidrug resistance efflux transporter family protein compare
MMP_RS00145 +0.4 1.3 ATP-dependent Clp protease proteolytic subunit compare
MMP_RS08085 +0.4 2.0 hypothetical protein compare
MMP_RS06910 +0.4 1.4 RlmF-related methyltransferase compare
MMP_RS03235 +0.4 1.6 tRNA pseudouridine(13) synthase TruD compare
MMP_RS08750 +0.4 1.1 hypothetical protein compare
MMP_RS01475 +0.4 1.3 phosphosulfolactate synthase compare
MMP_RS03215 +0.4 2.2 MBL fold metallo-hydrolase compare
MMP_RS03675 +0.4 2.3 RimK family alpha-L-glutamate ligase compare
MMP_RS01415 +0.4 0.9 DUF2067 domain-containing protein compare
MMP_RS00085 +0.4 1.9 DNA cytosine methyltransferase compare
MMP_RS07815 +0.4 0.4 DUF2120 domain-containing protein compare
MMP_RS06300 +0.4 1.2 ABC transporter substrate-binding protein compare
MMP_RS02555 +0.4 2.9 AIPR family protein compare
MMP_RS08580 +0.4 1.0 flagellin compare
MMP_RS08430 +0.4 1.5 HAD family hydrolase compare
MMP_RS01145 +0.4 1.3 ABC transporter ATP-binding protein compare
MMP_RS02770 +0.4 1.3 hypothetical protein compare
MMP_RS02395 +0.3 1.7 hypothetical protein compare
MMP_RS05235 +0.3 1.8 exodeoxyribonuclease III compare
MMP_RS08405 +0.3 1.7 MFS transporter compare
MMP_RS06680 +0.3 1.8 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS05490 +0.3 1.2 IMPACT family protein compare
MMP_RS04030 +0.3 1.2 hypothetical protein compare
MMP_RS02405 +0.3 1.3 hypothetical protein compare
MMP_RS08480 +0.3 1.5 molybdate ABC transporter substrate-binding protein compare
MMP_RS05435 +0.3 1.9 5'/3'-nucleotidase SurE compare
MMP_RS06665 +0.3 1.6 glycogen/starch synthase compare
MMP_RS06495 +0.3 0.6 YkgJ family cysteine cluster protein compare
MMP_RS01275 +0.3 0.9 class III signal peptide-containing protein compare
MMP_RS06305 +0.3 1.3 transporter substrate-binding domain-containing protein compare
MMP_RS08600 +0.3 0.7 flagellar protein D compare
MMP_RS05085 +0.3 1.6 AAA family ATPase compare
MMP_RS03540 +0.3 1.4 DUF2178 domain-containing protein compare
MMP_RS06045 +0.3 1.7 DNA polymerase compare
MMP_RS01855 +0.3 1.2 2-hydroxyacyl-CoA dehydratase family protein compare
MMP_RS01630 +0.3 1.1 N-glycosylase/DNA lyase compare
MMP_RS08080 +0.3 1.8 YchF/TatD family DNA exonuclease compare
MMP_RS04995 +0.3 1.1 hypothetical protein compare
MMP_RS06320 +0.3 1.2 hypothetical protein compare
MMP_RS01640 +0.3 1.4 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMP_RS09065 +0.3 1.7 hypothetical protein compare
MMP_RS05365 +0.3 0.8 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS06065 +0.3 2.1 iron ABC transporter substrate-binding protein compare
MMP_RS02695 +0.3 1.3 formylmethanofuran dehydrogenase subunit A compare
MMP_RS01065 +0.3 1.8 alpha/beta hydrolase compare
MMP_RS08610 +0.3 2.0 flagellar protein F compare
MMP_RS00905 +0.3 0.9 phenylacetate--CoA ligase compare
MMP_RS08845 +0.3 2.3 archaellum operon transcriptional activator EarA family protein compare
MMP_RS00945 +0.3 0.4 PadR family transcriptional regulator compare
MMP_RS07620 +0.3 0.6 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS05820 +0.3 1.3 RNA-binding transcriptional accessory protein compare
MMP_RS05620 +0.3 2.0 radical SAM protein compare
MMP_RS02365 +0.3 1.2 nitrogen fixation compare
MMP_RS02320 +0.3 1.8 glutamate-cysteine ligase family protein compare
MMP_RS04610 +0.3 0.7 Dabb family protein compare
MMP_RS03115 +0.3 1.8 hypothetical protein compare
MMP_RS00955 +0.3 1.6 coenzyme gamma-F420-2:alpha-L-glutamate ligase compare
MMP_RS02085 +0.3 1.4 inosine/xanthosine triphosphatase compare
MMP_RS09060 +0.3 1.4 hypothetical protein compare
MMP_RS07925 +0.3 0.6 haloacid dehalogenase compare
MMP_RS08475 +0.3 1.2 ABC transporter permease compare
MMP_RS00195 +0.3 2.1 DUF4013 domain-containing protein compare
MMP_RS05985 +0.3 0.4 hypothetical protein compare
MMP_RS02475 +0.3 0.4 hypothetical protein compare
MMP_RS00385 +0.3 1.0 P-II family nitrogen regulator compare
MMP_RS06465 +0.3 1.6 NERD domain-containing protein compare
MMP_RS04520 +0.3 0.9 nucleoside deaminase compare
MMP_RS05090 +0.3 1.0 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in nitrogen source experiments

For nitrogen source Glycine across organisms