Experiment set7IT060 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Varel_Bryant medium with Benzethonium chloride 0.003 mM

200 most important genes:

  gene name fitness t score description  
BT3757 -4.8 -6.6 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) compare
BT3395 -4.5 -7.5 N-succinylglutamate kinase (EC 2.7.2.-) (from data) compare
BT1857 -4.5 -6.8 3-isopropylmalate dehydrogenase (NCBI ptt file) compare
BT3733 -4.2 -10.2 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
BT1377 -4.2 -2.9 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase (NCBI ptt file) compare
BT2401 -4.1 -7.9 threonine synthase (NCBI ptt file) compare
BT3759 -4.1 -7.9 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) compare
BT3761 -4.1 -4.0 N-succinylglutamate synthase (from data) compare
BT2074 -4.0 -7.7 ketol-acid reductoisomerase (NCBI ptt file) compare
BT3758 -3.9 -3.8 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
BT3760 -3.9 -2.7 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
BT1843 -3.8 -5.8 adenylosuccinate synthetase (NCBI ptt file) compare
BT3549 -3.7 -6.6 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) compare
BT1861 -3.7 -6.1 2-isopropylmalate synthase (EC 2.3.3.13) (from data) compare
BT3936 -3.7 -2.5 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) compare
BT2402 -3.6 -10.3 homoserine phosphotransferase HomK (from data) compare
BT1379 -3.6 -3.5 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BT1374 -3.5 -3.4 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) compare
BT0201 -3.5 -2.4 histidinol dehydrogenase (NCBI ptt file) compare
BT3718 -3.5 -10.2 gamma-glutamyl phosphate reductase (NCBI ptt file) compare
BT2078 -3.5 -8.0 dihydroxy-acid dehydratase (NCBI ptt file) compare
BT1860 -3.4 -5.1 3-isopropylmalate dehydratase large subunit (NCBI ptt file) compare
BT0202 -3.3 -4.5 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
BT2403 -3.3 -9.3 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) compare
BT3933 -3.2 -4.9 prephenate dehydrogenase (EC 1.3.1.13) (from data) compare
BT1859 -3.2 -2.2 3-isopropylmalate dehydratase small subunit (NCBI ptt file) compare
BT2076 -3.1 -7.0 acetohydroxybutanoate synthase regulatory subunit (EC 2.2.1.6) (from data) compare
BT0738 -3.1 -3.0 serine hydroxymethyltransferase (NCBI ptt file) compare
BT1153 -3.1 -6.0 phosphoserine aminotransferase (NCBI ptt file) compare
BT0203 -3.1 -2.2 histidine biosynthesis bifunctional protein hisB (NCBI ptt file) compare
BT2836 -3.1 -14.6 2-oxoglutarate synthase subunit korA (NCBI ptt file) compare
BT2003 -3.1 -2.1 putative membrane peptidase (NCBI ptt file) compare
BT2837 -3.1 -12.4 2-oxoglutarate synthase subunit korB (NCBI ptt file) compare
BT2932 -3.1 -2.1 transcriptional regulator (NCBI ptt file) compare
BT3164 -3.1 -8.1 quinolinate synthetase A (NCBI ptt file) compare
BT3371 -3.0 -3.5 putative glycosyltransferase yibD (NCBI ptt file) compare
BT3717 -3.0 -4.1 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) compare
BT2129 -3.0 -4.0 aspartate--ammonia ligase (NCBI ptt file) compare
BT3253 -2.9 -2.8 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT0532 -2.9 -4.4 anthranilate synthase component I (NCBI ptt file) compare
BT0529 -2.9 -2.0 indole-3-glycerol phosphate synthase (NCBI ptt file) compare
BT1858 -2.8 -5.4 (R)-citramalate synthase (EC 2.3.1.182) (from data) compare
BT0892 -2.8 -1.9 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT3193 -2.7 -9.8 putative coenzyme A transferase (NCBI ptt file) compare
BT1152 -2.7 -1.9 D-3-phosphoglycerate dehydrogenase (NCBI ptt file) compare
BT3184 -2.7 -13.1 L-aspartate oxidase (NCBI ptt file) compare
BT2077 -2.7 -7.0 acetolactate synthase large subunit (NCBI ptt file) compare
BT1607 -2.6 -3.9 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT3361 -2.6 -7.0 erythronate-4-phosphate dehydrogenase (NCBI ptt file) compare
BT1378 -2.5 -2.4 imidazole glycerol phosphate synthase subunit hisF (NCBI ptt file) compare
BT2415 -2.5 -10.2 aspartate aminotransferase (NCBI ptt file) compare
BT1476 -2.5 -3.7 aspartate aminotransferase (NCBI ptt file) compare
BT0949 -2.5 -2.3 hypothetical protein (NCBI ptt file) compare
BT3320 -2.4 -7.5 dihydrodipicolinate reductase (NCBI ptt file) compare
BT0528 -2.4 -2.8 phosphoribosylanthranilate isomerase (EC 5.3.1.24) (from data) compare
BT1970 -2.4 -9.5 glutamate dehydrogenase (NCBI ptt file) compare
BT1733 -2.4 -1.6 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) compare
BT3719 -2.3 -3.9 glutamate 5-kinase (EC 2.7.2.11) (from data) compare
BT1270 -2.2 -5.5 putative Na+/H+ antiporter (NCBI ptt file) compare
BT1375 -2.2 -11.7 aspartokinase (NCBI ptt file) compare
BT0527 -2.2 -3.4 tryptophan synthase alpha chain (NCBI ptt file) compare
BT1844 -2.2 -4.9 transcriptional regulator, putative iron uptake regulation protein (NCBI ptt file) compare
BT2080 -2.2 -4.4 L-cysteine desulfidase cdsB (from data) compare
BT0530 -2.2 -4.4 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) compare
BT0322 -2.2 -2.1 putative oxidoreductase (NCBI ptt file) compare
BT1944 -2.2 -2.5 putative transposase (NCBI ptt file) compare
BT3918 -2.2 -4.1 pyridoxal phosphate biosynthetic protein pdxJ (NCBI ptt file) compare
BT1381 -2.1 -4.9 formyltetrahydrofolate deformylase (NCBI ptt file) compare
BT3260 -2.1 -3.2 DNA polymerase I (NCBI ptt file) compare
BT4211 -2.1 -2.0 putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) compare
BT1561 -2.1 -1.3 hypothetical protein (NCBI ptt file) compare
BT0200 -2.0 -3.0 ATP phosphoribosyltransferase (NCBI ptt file) compare
BT1336 -2.0 -3.7 putative translation initiation inhibitor (NCBI ptt file) compare
BT2283 -2.0 -2.3 hypothetical protein (NCBI ptt file) compare
BT4339 -1.9 -1.3 glutamine synthetase (NCBI ptt file) compare
BT0891 -1.9 -1.3 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT0771 -1.9 -4.9 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file) compare
BT3022 -1.9 -1.7 hypothetical protein (NCBI ptt file) compare
BT3372 -1.9 -5.5 glycosyltransferase (NCBI ptt file) compare
BT2142 -1.8 -1.2 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT1564 -1.7 -1.6 conserved hypothetical protein (NCBI ptt file) compare
BT1380 -1.7 -1.6 imidazole glycerol phosphate synthase subunit hisH (NCBI ptt file) compare
BT0533 -1.7 -1.2 tryptophan synthase beta chain (NCBI ptt file) compare
BT4098 -1.7 -1.1 Trk system K+ uptake protein trkA (NCBI ptt file) compare
BT4097 -1.6 -1.1 Trk system K+ uptake protein trkH (NCBI ptt file) compare
BT1746 -1.5 -1.6 conserved hypothetical protein (NCBI ptt file) compare
BT4644 -1.5 -2.5 putative anti-sigma factor (NCBI ptt file) compare
BT2321 -1.5 -3.0 putative integrase (NCBI ptt file) compare
BT1576 -1.5 -1.7 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT2686 -1.5 -3.7 putative cation efflux transporter (NCBI ptt file) compare
BT0531 -1.5 -2.0 anthranilate synthase component II (NCBI ptt file) compare
BT2417 -1.5 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT4551 -1.5 -1.4 putative GTPase, ThdF family (NCBI ptt file) compare
BT2546 -1.5 -8.9 transcriptional regulator (NCBI ptt file) compare
BT3805 -1.5 -3.2 two-component system sensor histidine kinase (NCBI ptt file) compare
BT0491 -1.5 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT3394 -1.5 -5.2 putative arginine decarboxylase (NCBI ptt file) compare
BT0067 -1.5 -2.1 hypothetical protein (NCBI ptt file) compare
BT0588 -1.4 -3.4 BexA: efflux pump for ciprofloxacin, lomefloxacin, and paraquat (from data) compare
BT4322 -1.4 -1.9 conserved hypothetical protein, with a diacylglycerol kinase catalytic domain (NCBI ptt file) compare
BT4666 -1.4 -2.3 putative K+ uptake system protein (NCBI ptt file) compare
BT0453 -1.4 -1.8 N-acylglucosamine 2-epimerase (NCBI ptt file) compare
BT3801 -1.4 -2.9 rteB, two-component system response regulator (NCBI ptt file) compare
BT0596 -1.4 -1.3 putative transcriptional regulator (NCBI ptt file) compare
BT0747 -1.3 -0.9 putative phosphatidylinositol-4-phosphate 5-kinase (NCBI ptt file) compare
BT0397 -1.3 -1.5 conserved hypothetical protein (NCBI ptt file) compare
BT0828 -1.3 -1.5 dTDP-4-dehydrorhamnose 3,5-epimerase (NCBI ptt file) compare
BT0617 -1.3 -0.9 Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfB (NCBI ptt file) compare
BT2169 -1.3 -3.1 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT3374 -1.3 -5.1 putative carbamoyl-phosphate-synthetase (NCBI ptt file) compare
BT3935 -1.3 -3.1 aminotransferase (NCBI ptt file) compare
BT1723 -1.3 -4.1 polysialic acid transport protein kpsD precursor (NCBI ptt file) compare
BT0542 -1.2 -1.6 conserved hypothetical protein (NCBI ptt file) compare
BT2172 -1.2 -7.5 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT1747 -1.2 -3.2 pyruvate-flavodoxin oxidoreductase (NCBI ptt file) compare
BT4737 -1.2 -4.0 pyruvate formate-lyase activating enzyme (NCBI ptt file) compare
BT2687 -1.2 -1.8 cation efflux system protein (NCBI ptt file) compare
BT0723 -1.2 -1.6 hypothetical protein (NCBI ptt file) compare
BT1220 -1.2 -1.1 6-phosphogluconolactonase (NCBI ptt file) compare
BT0922 -1.2 -2.7 hypothetical protein (NCBI ptt file) compare
BT3035 -1.2 -7.1 carboxy-terminal processing protease precursor (NCBI ptt file) compare
BT4206 -1.2 -1.3 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (NCBI ptt file) compare
BT1735 -1.2 -1.9 chromate transport protein (NCBI ptt file) compare
BT1526 -1.1 -2.7 myo-inositol-1-phosphate synthase (NCBI ptt file) compare
BT3762 -1.1 -3.0 arginine repressor, transcriptional regulator of arginine metabolism (NCBI ptt file) compare
BT0704 -1.1 -1.5 phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file) compare
BT2974 -1.1 -1.6 hypothetical protein (NCBI ptt file) compare
BT1353 -1.1 -1.5 glycosyltransferase (NCBI ptt file) compare
BT0913 -1.1 -3.3 putative Fe-S oxidoreductase (NCBI ptt file) compare
BT2006 -1.1 -1.4 hypothetical protein (NCBI ptt file) compare
BT3370 -1.1 -1.3 putative glycosyltransferase yibD (NCBI ptt file) compare
BT1637 -1.1 -2.4 hypothetical protein (NCBI ptt file) compare
BT1470 -1.1 -1.6 putative two-component system sensor histidine kinase (NCBI ptt file) compare
BT0584 -1.1 -2.0 putative outer membrane protein (NCBI ptt file) compare
BT2042 -1.1 -1.2 tRNA and rRNA cytosine-C5-methylase (NCBI ptt file) compare
BT0156 -1.1 -2.1 transcriptional regulator (NCBI ptt file) compare
BT0231 -1.1 -1.5 excisionase (NCBI ptt file) compare
BT3866 -1.1 -5.4 ammonium-dependent carbamoyl phosphate synthetase CarB2 (EC 6.3.4.16) (from data) compare
BT2155 -1.1 -3.0 hypothetical protein (NCBI ptt file) compare
BT1990 -1.1 -1.0 hypothetical protein (NCBI ptt file) compare
BT1947 -1.1 -1.7 hypothetical protein (NCBI ptt file) compare
BT1145 -1.1 -1.4 glucose-inhibited division protein (NCBI ptt file) compare
BT1166 -1.1 -2.2 putative glycosyltransferase (NCBI ptt file) compare
BT0177 -1.0 -2.1 hypothetical protein (NCBI ptt file) compare
BT1599 -1.0 -3.5 BexA, membrane protein (NCBI ptt file) compare
BT1565 -1.0 -2.2 hypothetical protein (NCBI ptt file) compare
BT1972 -1.0 -6.6 phosphoenolpyruvate synthase/pyruvate phosphate dikinase (NCBI ptt file) compare
BT4699 -1.0 -2.0 putative hydrolase, haloacid dehalogenase-like hydrolase (NCBI ptt file) compare
BT2170 -1.0 -4.5 hypothetical protein (NCBI ptt file) compare
BT1962 -1.0 -1.2 hypothetical protein (NCBI ptt file) compare
BT0519 -1.0 -1.7 hypothetical protein (NCBI ptt file) compare
BT2344 -1.0 -1.1 hypothetical protein (NCBI ptt file) compare
BT0658 -1.0 -2.6 hypothetical protein (NCBI ptt file) compare
BT0476 -1.0 -1.4 D-mannose-1-phosphate guanyltransferase (NCBI ptt file) compare
BT0700 -1.0 -3.6 GTP pyrophosphokinase (NCBI ptt file) compare
BT2173 -1.0 -4.3 hypothetical protein (NCBI ptt file) compare
BT1173 -1.0 -1.8 hypothetical protein (NCBI ptt file) compare
BT1608 -1.0 -4.3 capsule biosynthesis protein capA (NCBI ptt file) compare
BT3912 -1.0 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT3979 -1.0 -1.9 putative methyltransferase (NCBI ptt file) compare
BT0241 -1.0 -1.4 hypothetical protein (NCBI ptt file) compare
BT2843 -1.0 -2.3 integrase (NCBI ptt file) compare
BT3375 -1.0 -4.3 aspartate aminotransferase (NCBI ptt file) compare
BT0498 -1.0 -1.5 hypothetical protein (NCBI ptt file) compare
BT2358 -1.0 -1.6 hypothetical protein (NCBI ptt file) compare
BT4469 -1.0 -1.0 conserved hypothetical protein (NCBI ptt file) compare
BT3369 -1.0 -1.5 putative glycosyltransferase (NCBI ptt file) compare
BT4031 -0.9 -2.2 N-acetylmuramoyl-L-alanine amidase (NCBI ptt file) compare
BT1348 -0.9 -3.5 CDP-abequose synthase (NCBI ptt file) compare
BT4310 -0.9 -6.3 NADPH-dependent glutamate synthase small chain (NCBI ptt file) compare
BT2045 -0.9 -1.2 hypothetical protein (NCBI ptt file) compare
BT0631 -0.9 -1.5 conserved hypothetical protein (NCBI ptt file) compare
BT1894 -0.9 -4.0 TPR-repeat-containing proteins (NCBI ptt file) compare
BT0562 -0.9 -2.6 putative ABC transporter ATP-binding protein (NCBI ptt file) compare
BT3168 -0.9 -4.4 putative Fe-S oxidoreductase (NCBI ptt file) compare
BT2075 -0.9 -2.1 acyl-ACP thioesterase (NCBI ptt file) compare
BT0927 -0.9 -1.0 two-component system sensor histidine kinase (NCBI ptt file) compare
BT0669 -0.9 -1.9 putative cation efflux system protein (NCBI ptt file) compare
BT1326 -0.9 -1.0 TPR-domain containing protein (NCBI ptt file) compare
BT2841 -0.9 -1.8 pyruvate kinase (NCBI ptt file) compare
BT3376 -0.9 -3.4 nucleotide sugar transaminase (NCBI ptt file) compare
BT4218 -0.9 -2.9 phosphate starvation-inducible protein, PhoH (NCBI ptt file) compare
BT0175 -0.9 -1.3 conserved hypothetical protein (NCBI ptt file) compare
BT1117 -0.9 -1.5 conserved hypothetical protein, with a cAMP-binding domain (NCBI ptt file) compare
BT0814 -0.9 -1.6 conserved hypothetical protein, putative outer membrane protein (NCBI ptt file) compare
BT0725 -0.9 -2.1 dTDP-4-dehydrorhamnose reductase (NCBI ptt file) compare
BT4062 -0.9 -2.9 NADH dehydrogenase I, chain J (NCBI ptt file) compare
BT3373 -0.9 -2.4 spermidine n1-acetyltransferase (NCBI ptt file) compare
BT0638 -0.9 -2.2 putative methionine aminopeptidase A (NCBI ptt file) compare
BT3220 -0.9 -5.4 TPR-repeat-containing protein (NCBI ptt file) compare
BT3802 -0.9 -2.7 peptidyl-prolyl cis-trans isomerase, cyclophilin-type (NCBI ptt file) compare
BT1979 -0.8 -2.4 Meso-diaminopimelate D-dehydrogenase (NCBI ptt file) compare
BT4258 -0.8 -3.5 putative 5-formyltetrahydrofolate cyclo-ligase (NCBI ptt file) compare
BT1836 -0.8 -4.1 thiamine biosynthesis protein ThiH (NCBI ptt file) compare
BT1673 -0.8 -2.8 thiamine biosynthesis protein, putative (NCBI ptt file) compare
BT0383 -0.8 -2.3 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT0010 -0.8 -1.7 hypothetical protein (NCBI ptt file) compare
BT2418 -0.8 -2.0 hypothetical protein (NCBI ptt file) compare
BT1329 -0.8 -1.5 putative thiol peroxidase (NCBI ptt file) compare
BT1444 -0.8 -1.4 conserved hypothetical protein (NCBI ptt file) compare


Specific Phenotypes

None in this experiment

For Bacteroides thetaiotaomicron VPI-5482 in stress experiments

For stress Benzethonium chloride across organisms