Experiment set7IT059 for Phaeobacter inhibens DSM 17395

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L-Glutamic acid monopotassium salt monohydrate carbon source

200 most detrimental genes:

  gene name fitness t score description  
PGA1_c02900 +1.4 3.5 putative molybdopterin-converting factor subunit 1 compare
PGA1_c16920 +1.1 5.4 molybdenum cofactor biosynthesis protein C compare
PGA1_c26620 +1.1 8.6 putative molybdopterin biosynthesis protein MoeB compare
PGA1_c16930 +1.0 7.2 molybdopterin biosynthesis protein MoeA compare
PGA1_c35770 +1.0 3.1 putative flagella basal body P-ring formation protein FlgA compare
PGA1_c25750 +1.0 7.3 NADH-quinone oxidoreductase subunits E/F (fused) compare
PGA1_c03080 +1.0 4.4 molybdenum cofactor biosynthesis protein B compare
PGA1_c25740 +0.9 7.8 formate dehydrogenase H compare
PGA1_c27760 +0.9 5.6 ABC transporter ATP-binding protein compare
PGA1_c27750 +0.9 6.3 ABC-type tungstate transport system, permease component compare
PGA1_c03240 +0.9 5.6 probable molybdopterin-guanine dinucleotide biosynthesis protein A compare
PGA1_c03230 +0.9 6.6 putative formate dehydrogenase, subunit FdhD compare
PGA1_c27770 +0.8 6.6 putative ABC transporter inner membrane component compare
PGA1_c02910 +0.8 3.0 molybdopterin-converting factor subunit 2 compare
PGA1_c30410 +0.7 2.6 HTH-type transcriptional regulator, AsnC family compare
PGA1_c18560 +0.7 2.1 hypothetical protein compare
PGA1_c16190 +0.7 2.6 hypothetical protein compare
PGA1_c30900 +0.7 3.4 hypothetical protein compare
PGA1_262p00950 +0.7 3.2 thioesterase superfamily protein TdaD compare
PGA1_c03270 +0.7 4.9 molybdopterin molybdenumtransferase MoeA compare
PGA1_c14530 +0.6 1.0 transcriptional regulator, TetR family compare
PGA1_c09290 +0.6 2.8 WGR domain. compare
PGA1_c10200 +0.6 2.0 molybdenum cofactor biosynthesis protein A compare
PGA1_c30420 +0.6 4.6 alanine dehydrogenase Ald compare
PGA1_c23690 +0.6 4.1 protease do compare
PGA1_c04900 +0.6 2.5 peptidyl-tRNA hydrolase Pth compare
PGA1_c11170 +0.6 2.1 segregation and condensation protein A compare
PGA1_c26850 +0.6 2.6 Predicted metal-binding protein compare
PGA1_c35890 +0.6 3.4 putative rod-binding protein compare
PGA1_c15530 +0.6 3.6 Uncharacterized protein conserved in bacteria compare
PGA1_c30460 +0.5 4.5 D-alanine aminotransferase Dat compare
PGA1_c06200 +0.5 2.3 probable succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B compare
PGA1_c35850 +0.5 2.9 flagellar biosynthesis repressor FlbT compare
PGA1_c13510 +0.5 1.9 hypothetical protein compare
PGA1_c17410 +0.5 3.7 MFS type transporter compare
PGA1_c18580 +0.5 1.7 hypothetical protein compare
PGA1_c05420 +0.5 1.2 glucokinase (EC 2.7.1.2) (from data) compare
PGA1_c04960 +0.5 3.9 putative non-specific ribonucleoside hydrolase compare
PGA1_c33600 +0.5 1.2 hypothetical protein compare
PGA1_c32930 +0.5 0.9 ribosome-binding factor A compare
PGA1_262p00770 +0.5 1.7 putative lytic murein transglycosylase compare
PGA1_c14800 +0.5 1.2 nitrogen regulation protein NtrY compare
PGA1_262p00610 +0.5 0.8 metallophosphoesterase compare
PGA1_c13460 +0.5 2.9 putative sulfurtransferase compare
PGA1_262p01165 +0.4 1.8 hypothetical protein compare
PGA1_c33200 +0.4 3.1 putative serine-protein kinase (anti-sigma-B factor) compare
PGA1_262p00960 +0.4 4.2 Prephenate dehydratase. compare
PGA1_c18340 +0.4 1.6 putative baseplate assembly protein W compare
PGA1_c29000 +0.4 2.2 inner membrane lipoprotein compare
PGA1_262p00990 +0.4 2.0 transcriptional regulator, LysR family compare
PGA1_262p01390 +0.4 1.5 hypothetical protein compare
PGA1_262p01250 +0.4 1.7 transcriptional regulator, crp family compare
PGA1_262p01290 +0.4 2.5 transcriptional regulator, AraC family compare
PGA1_c11070 +0.4 2.2 exodeoxyribonuclease III compare
PGA1_c10060 +0.4 1.4 putative transcriptional regulator, MerR family compare
PGA1_78p00170 +0.4 1.7 putative sn-glycerol-3-phosphate transport system permease protein UgpA compare
PGA1_c35170 +0.4 1.0 DNA polymerase III subunit epsilon compare
PGA1_c35700 +0.4 2.7 putative transglycosylase, SLT family compare
PGA1_262p02010 +0.4 1.3 Uncharacterized conserved protein compare
PGA1_c05530 +0.4 2.1 putative allantoin catabolism protein compare
PGA1_c30100 +0.4 1.2 cytochrome c oxidase subunit 4 compare
PGA1_c21140 +0.4 2.2 carboxymuconolactone decarboxylase-like protein compare
PGA1_c24390 +0.4 1.4 Uncharacterized protein conserved in bacteria compare
PGA1_262p01280 +0.4 1.3 transcriptional regulator, TetR family compare
PGA1_c30480 +0.4 3.1 Uncharacterized conserved protein compare
PGA1_c13500 +0.4 1.5 hypothetical protein compare
PGA1_c17160 +0.4 1.4 Stress-induced morphogen (activity unknown) compare
PGA1_c03360 +0.4 1.1 Predicted O-methyltransferase compare
PGA1_c11810 +0.4 0.8 hypothetical protein compare
PGA1_c16750 +0.4 2.2 putative MFS-type transporter compare
PGA1_c10740 +0.4 2.3 Predicted ATPase (AAA+ superfamily) compare
PGA1_c10830 +0.4 1.9 colicin V production protein-like protein compare
PGA1_c34650 +0.4 0.8 UPF0090 protein YhbC compare
PGA1_c22810 +0.4 1.4 hypothetical protein compare
PGA1_c27910 +0.4 2.0 N-acetylglucosamine kinase (EC 2.7.1.59) (from data) compare
PGA1_78p00280 +0.4 1.8 putative sodium/alanine symporter compare
PGA1_c35900 +0.4 2.9 putative flagellar hook-length control protein compare
PGA1_c35610 +0.4 2.3 flagellar biosynthetic protein FliP compare
PGA1_c35590 +0.4 2.9 Flagellin and related hook-associated proteins compare
PGA1_78p00500 +0.4 1.7 putative transcriptional regulator compare
PGA1_c10730 +0.4 1.4 ribose-5-phosphate isomerase B compare
PGA1_c05620 +0.4 2.4 putative 7-cyano-7-deazaguanosine biosynthesis protein QueE compare
PGA1_c12720 +0.4 2.9 Flagellar motor switch protein compare
PGA1_c18480 +0.4 3.3 hypothetical protein compare
PGA1_c18490 +0.3 3.2 Predicted ATPase compare
PGA1_c12390 +0.3 0.8 putative protein SoxS compare
PGA1_262p00250 +0.3 1.5 ferritin-like protein compare
PGA1_c02020 +0.3 1.7 Predicted metal-binding protein compare
PGA1_c15380 +0.3 0.8 Uncharacterized conserved protein compare
PGA1_c29290 +0.3 1.5 putative pterin 4 alpha carbinolamine dehydratase compare
PGA1_c15240 +0.3 2.9 two-component system histidine kinase / response regulator compare
PGA1_c19140 +0.3 1.9 sarcosine oxidase-like protein compare
PGA1_c27660 +0.3 1.6 hypothetical protein compare
PGA1_c22820 +0.3 1.2 lytic transglycosylase-like protein compare
PGA1_c12550 +0.3 1.4 hypothetical protein compare
PGA1_c33055 +0.3 2.0 hypothetical protein compare
PGA1_c23640 +0.3 2.7 Protein of unknown function (DUF1217). compare
PGA1_c20660 +0.3 1.9 TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, large permease component (from data) compare
PGA1_c10100 +0.3 1.8 putative glutathione transport system permease protein GsiD compare
PGA1_262p00980 +0.3 2.4 transcriptional regulator, LysR family compare
PGA1_262p01110 +0.3 1.7 hypothetical protein compare
PGA1_c15710 +0.3 1.9 acyl-CoA dehydrogenase compare
PGA1_c03250 +0.3 1.7 molybdopterin-guanine dinucleotide biosynthesis protein B compare
PGA1_c31780 +0.3 0.9 DNA polymerase I compare
PGA1_262p00920 +0.3 1.6 Membrane proteins related to metalloendopeptidases compare
PGA1_c19160 +0.3 2.4 sarcosine oxidase 2 subunit delta compare
PGA1_c14710 +0.3 1.1 hypoxanthine-guanine phosphoribosyltransferase Hpt compare
PGA1_c20280 +0.3 1.3 penicillin-binding protein 1A MrcA compare
PGA1_c34190 +0.3 1.8 methyltransferase-like protein compare
PGA1_c35820 +0.3 2.0 flagellar basal-body rod protein FlgC compare
PGA1_c16490 +0.3 2.3 hypothetical protein compare
PGA1_c32430 +0.3 2.2 hypothetical protein compare
PGA1_c35580 +0.3 2.5 flagellar hook-associated protein FlgK compare
PGA1_c35630 +0.3 2.5 putative flagellar biosynthesis protein compare
PGA1_c35660 +0.3 1.5 hypothetical protein compare
PGA1_c35840 +0.3 2.4 flagellum-specific ATP synthase FliI compare
PGA1_c05720 +0.3 1.2 hypothetical protein compare
PGA1_c15280 +0.3 1.3 Uncharacterized conserved protein compare
PGA1_c35570 +0.3 2.5 flagellar hook protein FlgE compare
PGA1_c13640 +0.3 2.2 Phosphopantetheine attachment site. compare
PGA1_c21640 +0.3 0.9 hypothetical protein compare
PGA1_c10880 +0.3 1.9 alanine racemase, biosynthetic compare
PGA1_c02100 +0.3 2.3 diguanylate cyclase (GGDEF) domain-containing protein compare
PGA1_c24500 +0.3 2.0 putative signal transduction response regulator receiver compare
PGA1_c11520 +0.3 2.3 gamma-glutamylputrescine synthetase PuuA compare
PGA1_c35830 +0.3 2.1 putative flagellar basal-body rod protein FlgB compare
PGA1_c28460 +0.3 2.0 putative metallopeptidase, family M24 compare
PGA1_c18800 +0.3 1.8 putative flagellar motor switch protein FliG compare
PGA1_262p00910 +0.3 1.0 putative cation transort protein compare
PGA1_c30660 +0.3 1.3 putative addiction module antidote protein, HigA family compare
PGA1_c35600 +0.3 2.3 flagellar P-ring protein FlgI compare
PGA1_c32810 +0.3 2.2 peptidase, M16 family compare
PGA1_262p00800 +0.3 2.5 phenylacetic acid degradation protein PaaZ compare
PGA1_c00800 +0.3 1.7 hypothetical protein compare
PGA1_c18520 +0.3 1.4 Uncharacterized protein conserved in bacteria compare
PGA1_c18380 +0.3 0.5 Phage Head-Tail Attachment. compare
PGA1_c06090 +0.3 2.1 type II secretion system protein F-like protein compare
PGA1_c32270 +0.3 2.0 hypothetical protein compare
PGA1_c21720 +0.3 2.0 putative S-adenosylmethionine uptake transporter compare
PGA1_c02540 +0.3 1.9 Uncharacterized conserved protein compare
PGA1_c19740 +0.3 1.6 hypothetical protein compare
PGA1_c35750 +0.3 1.9 putative flagellar basal body-associated protein FliL compare
PGA1_c01830 +0.3 1.2 Uncharacterized conserved small protein compare
PGA1_262p00340 +0.3 1.5 oligopeptide ABC transporter, ATP binding protein compare
PGA1_c14540 +0.3 1.3 putative polyphosphate kinase 2 compare
PGA1_c22370 +0.3 1.6 hypothetical protein compare
PGA1_65p00070 +0.3 1.1 putative regulatory protein, LuxR family compare
PGA1_c33170 +0.3 1.6 putative sensor protein compare
PGA1_c23600 +0.3 1.8 exodeoxyribonuclease 7 large subunit compare
PGA1_c20530 +0.3 1.5 putative transcriptional regulator compare
PGA1_c11400 +0.3 1.4 ferric uptake regulation protein Fur compare
PGA1_c02390 +0.3 1.3 transcriptional regulator, MerR family compare
PGA1_c05990 +0.3 1.7 formate--tetrahydrofolate ligase Fhs compare
PGA1_c14960 +0.3 1.3 putative transcriptional regulator compare
PGA1_c16440 +0.3 1.4 MFS transporter compare
PGA1_c11320 +0.3 1.3 3-hydroxyacyl-CoA dehydrogenase type-2 compare
PGA1_c35780 +0.3 2.2 flagellar basal-body rod protein FlgG compare
PGA1_c08220 +0.3 1.6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily. compare
PGA1_c09910 +0.3 1.3 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol compare
PGA1_c16110 +0.3 1.3 putative ion channel compare
PGA1_c17740 +0.3 1.6 putative gene transfer agent protein compare
PGA1_78p00340 +0.3 1.0 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol compare
PGA1_c06020 +0.3 0.8 thioesterase domain-containing protein compare
PGA1_c10350 +0.3 2.0 Predicted kinase compare
PGA1_c36110 +0.3 0.9 monofunctional biosynthetic peptidoglycan transglycosylase MtgA compare
PGA1_c10630 +0.3 1.9 SnoaL-like polyketide cyclase. compare
PGA1_c04050 +0.3 1.5 phenylacetic acid degradation protein PaaD compare
PGA1_c31510 +0.3 1.9 carbonic anhydrase CynT compare
PGA1_c22860 +0.3 1.1 hypothetical protein compare
PGA1_c06490 +0.3 1.9 sodium/glutamate symport carrier protein GltS compare
PGA1_c14360 +0.3 1.9 cell cycle response regulator compare
PGA1_c35760 +0.3 1.6 flagellar L-ring protein FlgH compare
PGA1_c22680 +0.3 0.8 Arc-like DNA binding domain. compare
PGA1_262p01540 +0.3 1.3 putative enoyl-CoA hydratase / isomerase compare
PGA1_c35860 +0.3 1.7 flagellar protein FlaF compare
PGA1_c28320 +0.3 1.8 ABC transporter, ATP-binding protein compare
PGA1_c08850 +0.3 1.4 secondary thiamine-phosphate synthase enzyme compare
PGA1_c01670 +0.3 1.2 hypothetical protein compare
PGA1_c03330 +0.3 1.1 tetratricopeptide repeat-containing protein compare
PGA1_c19790 +0.3 1.0 putative DNA polymerase III chi subunit, holC compare
PGA1_c29590 +0.3 1.4 hypothetical protein compare
PGA1_c18550 +0.3 1.6 hypothetical protein compare
PGA1_262p01670 +0.3 1.5 putative transcriptional regulator, LysR family compare
PGA1_c16370 +0.3 1.4 arginase ArcA compare
PGA1_78p00160 +0.3 0.9 putative sugar-binding periplasmic protein compare
PGA1_c31380 +0.2 1.2 hypothetical protein compare
PGA1_262p00050 +0.2 1.6 putative glycosyl transferase compare
PGA1_c31930 +0.2 2.0 putative transporter, MFS family compare
PGA1_262p00650 +0.2 1.5 putative lytic murein transglycosylase compare
PGA1_c34230 +0.2 1.9 putative HTH-type transcriptional regulator, AraC family compare
PGA1_262p00330 +0.2 1.7 oligopeptide ABC transporter, ATP binding protein compare
PGA1_c14640 +0.2 0.7 hypothetical protein compare
PGA1_c34150 +0.2 0.3 exodeoxyribonuclease VII, small subunit compare
PGA1_c08360 +0.2 1.0 Rhodanese-related sulfurtransferase compare
PGA1_c35740 +0.2 1.6 hypothetical protein compare
PGA1_c13750 +0.2 1.4 phosphopantetheine binding protein compare
PGA1_c04070 +0.2 1.2 phenylacetic acid degradation protein PaaB compare
PGA1_c04940 +0.2 1.3 Lipid A 3-O-deacylase (PagL). compare
PGA1_c24280 +0.2 1.6 uncharacterized GST-like protein YghU compare
PGA1_c35640 +0.2 2.2 flagellar M-ring protein FliF compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source L-Glutamic acid monopotassium salt monohydrate in Phaeobacter inhibens DSM 17395

For carbon source L-Glutamic acid monopotassium salt monohydrate across organisms