Experiment set7IT058 for Marinobacter adhaerens HP15

Compare to:

marine broth with Aluminum chloride hydrate 1 mM

200 most detrimental genes:

  gene name fitness t score description  
HP15_541 +2.3 13.7 peptide chain release factor 3 compare
HP15_3974 +2.2 15.3 short chain dehydrogenase compare
HP15_3972 +2.1 4.5 conserved hypothetical protein compare
HP15_3512 +2.1 11.6 glutathione synthetase compare
HP15_3016 +2.0 10.4 Ion traffic superfamily protein compare
HP15_1069 +1.8 10.2 TRAP transporter solute receptor, TAXI family protein compare
HP15_2996 +1.8 8.8 acetyl-CoA acetyltransferase compare
HP15_771 +1.8 7.3 glycine cleavage T-protein (aminomethyl transferase) compare
HP15_1289 +1.8 11.8 electron transport complex, RnfABCDGE type, C subunit compare
HP15_1822 +1.8 5.9 CvpA family protein compare
HP15_1799 +1.8 11.5 sterol-binding domain protein compare
HP15_3973 +1.7 7.3 long-chain-fatty-acid-CoA ligase compare
HP15_238 +1.7 7.6 protein of unknown function, HemX compare
HP15_1288 +1.6 6.3 electron transport complex, RnfABCDGE type, D subunit compare
HP15_2466 +1.5 9.3 tRNA-i(6)A37 thiotransferase enzyme MiaB compare
HP15_1291 +1.5 9.5 electron transport complex, RnfA compare
HP15_1860 +1.5 8.5 VacJ family lipoprotein compare
HP15_1332 +1.5 9.9 sodium ion-translocating decarboxylase, beta subunit compare
HP15_3975 +1.5 8.4 conserved hypothetical protein, secreted compare
HP15_1286 +1.5 9.1 SoxR-reducing system protein RsxE compare
HP15_2419 +1.5 6.0 bax protein compare
HP15_738 +1.4 4.8 phosphoesterase, PA-phosphatase compare
HP15_3376 +1.4 11.8 RNA polymerase-associated protein RapA compare
HP15_3781 +1.4 9.1 electron transport protein SCO1/SenC compare
HP15_1298 +1.4 5.9 phosphoribosylglycinamide formyltransferase compare
HP15_3087 +1.3 4.5 protein belonging to uncharacterized protein family UPF0125 compare
HP15_260 +1.3 8.7 hydrolase, alpha/beta fold family protein compare
HP15_1833 +1.3 2.9 isopropylmalate isomerase small subunit compare
HP15_2186 +1.3 7.1 trigger factor compare
HP15_749 +1.3 2.9 iron(III) ABC transporter, ATP-binding protein compare
HP15_1442 +1.2 2.6 membrane protein compare
HP15_2433 +1.2 3.6 toluene tolerance family protein compare
HP15_1287 +1.2 3.1 electron transport complex, RnfABCDGE type, G subunit compare
HP15_237 +1.2 8.1 HemY domain protein compare
HP15_527 +1.2 6.9 pseudouridine synthase, RluA family compare
HP15_784 +1.2 1.6 ribonuclease 3 compare
HP15_1456 +1.2 2.8 extracellular solute-binding protein, family 1 compare
HP15_1331 +1.1 5.8 pyruvate carboxylase subunit B compare
HP15_3003 +1.1 4.6 protein-export protein SecB compare
HP15_2702 +1.1 6.3 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase compare
HP15_3742 +1.1 6.5 Fmu, rRNA SAM-dependent methyltransferase compare
HP15_2686 +1.1 3.1 allophanate hydrolase subunit 1 compare
HP15_2989 +1.1 6.1 metal-sulfur cluster biosynthetic enzyme compare
HP15_3334 +1.1 7.0 polyphosphate kinase compare
HP15_3317 +1.1 1.2 acetylglutamate kinase compare
HP15_2231 +1.1 9.0 pitrilysin metallopeptidase 1 compare
HP15_1163 +1.0 8.4 [protein-PII] uridylyltransferase compare
HP15_2528 +1.0 2.6 hypothetical protein compare
HP15_3406 +1.0 1.2 hypothetical protein compare
HP15_2512 +1.0 4.2 tRNA synthetase, class II (D, K and N) compare
HP15_781 +1.0 2.5 GTP-binding protein LepA compare
HP15_1550 +1.0 2.4 protein/domain typically associated with flavoprotein oxygenase, DIM6/NTAB family protein compare
HP15_2685 +1.0 4.1 UPF0271 protein, LamB/YcsF family compare
HP15_2501 +1.0 4.6 DNA mismatch repair protein mutL compare
HP15_1290 +1.0 3.4 electron transport complex, RnfABCDGE type, B subunit compare
HP15_1220 +1.0 7.9 acetyltransferase, GNAT family compare
HP15_2190 +1.0 2.3 peptidyl-prolyl cis-trans isomerase B compare
HP15_1847 +1.0 2.0 hypothetical protein compare
HP15_3981 +1.0 3.4 two component transcriptional regulator, Fis family compare
HP15_908 +1.0 2.6 enoyl-CoA hydratase/isomerase compare
HP15_1455 +1.0 5.3 iron(III) ABC transporter, permease protein compare
HP15_352 +0.9 5.6 N-acetyl-gamma-glutamyl-phosphate reductase compare
HP15_2000 +0.9 1.5 conserved hypothetical protein compare
HP15_3529 +0.9 5.2 GTP cyclohydrolase 1 compare
HP15_704 +0.9 3.2 translation-associated GTPase compare
HP15_2687 +0.9 3.3 urea amidolyase related protein compare
HP15_2364 +0.9 2.5 nucleotide-binding protein compare
HP15_4077 +0.9 1.9 conserved hypothetical protein compare
HP15_1834 +0.9 5.3 protein containing 3-isopropylmalate dehydratase, large subunit region domain compare
HP15_3827 +0.9 3.9 secreted protein compare
HP15_p42g14 +0.9 1.3 hypothetical protein compare
HP15_2262 +0.9 1.5 transcriptional Regulator, TetR family protein compare
HP15_3762 +0.9 2.8 protein containing DUF1653 compare
HP15_1605 +0.9 2.1 general secretion pathway protein H compare
HP15_2357 +0.8 3.6 conserved hypothetical protein compare
HP15_321 +0.8 3.5 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase compare
HP15_2411 +0.8 4.0 type IV pilus prepilin peptidase PilD compare
HP15_1745 +0.8 4.7 methyltransferase type 11 compare
HP15_1734 +0.8 2.1 ABC-type multidrug transport system, ATPase component compare
HP15_3622 +0.8 3.8 peroxiredoxin compare
HP15_555 +0.8 2.9 MraZ protein compare
HP15_2763 +0.8 3.0 methyltransferase, UbiE/COQ5 family protein compare
HP15_2221 +0.8 5.4 pseudouridine synthase, RluA family compare
HP15_1609 +0.8 4.0 general secretion pathway protein L compare
HP15_2582 +0.8 2.1 NADH-ubiquinone oxidoreductase, chain 4L compare
HP15_514 +0.8 1.2 peptidylprolyl isomerase, FKBP-type compare
HP15_433 +0.8 6.5 adenylate cyclase compare
HP15_1733 +0.8 2.5 conserved hypothetical protein compare
HP15_721 +0.8 2.3 protein belonging to uncharacterized protein family UPF0047 compare
HP15_44 +0.8 2.8 DitK protein compare
HP15_2700 +0.7 1.4 phenylacetate-CoA oxygenase, PaaJ subunit compare
HP15_3351 +0.7 1.8 hypoxanthine-guanine phosphoribosyltransferase compare
HP15_1607 +0.7 1.9 general secretion pathway protein J-like protein compare
HP15_1931 +0.7 4.2 2-methylcitrate synthase/citrate synthase II compare
HP15_1861 +0.7 1.8 thioesterase superfamily protein compare
HP15_2424 +0.7 1.1 AFG1-family ATPase compare
HP15_2415 +0.7 3.9 sensory box sensor histidine kinase/response regulator compare
HP15_1177 +0.7 0.9 (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase compare
HP15_2777 +0.7 1.9 penicillin-binding protein 1B compare
HP15_1610 +0.7 3.4 general secretion pathway protein M compare
HP15_4090 +0.7 4.9 L-lactate dehydrogenase, LutC subunit (from data) compare
HP15_3967 +0.7 2.5 integral membrane sensor signal transduction histidine kinase compare
HP15_2180 +0.7 3.8 transcriptional regulator, RpiR family protein compare
HP15_2080 +0.7 4.8 ATP-dependent Clp protease ATP-binding subunit ClpA compare
HP15_3053 +0.7 3.4 transcriptional regulator, MarR family protein compare
HP15_2355 +0.7 4.8 type II and III secretion system protein compare
HP15_2514 +0.7 4.0 lysine 2,3-aminomutase YodO family protein compare
HP15_3237 +0.7 1.3 nitrogen regulatory protein P-II family protein-like protein compare
HP15_1764 +0.7 2.5 two-component response regulator compare
HP15_655 +0.7 1.9 phage tail collar domain protein-like protein compare
HP15_2497 +0.7 4.7 HflK compare
HP15_794 +0.7 2.1 conserved hypothetical protein compare
HP15_256 +0.7 4.5 serine protease compare
HP15_p42g18 +0.7 4.5 traM-like protein compare
HP15_1606 +0.7 2.0 general secretion pathway protein I-like protein compare
HP15_1832 +0.6 2.9 3-isopropylmalate dehydrogenase compare
HP15_1933 +0.6 3.0 transcriptional regulator, GntR family compare
HP15_1318 +0.6 2.0 RDD domain containing protein compare
HP15_34 +0.6 3.6 transcriptional regulator, IclR family compare
HP15_1614 +0.6 3.0 conserved hypothetical protein compare
HP15_3716 +0.6 1.8 conserved hypothetical protein compare
HP15_1130 +0.6 4.2 transporter, BCCT family protein compare
HP15_1602 +0.6 3.5 type II secretion system protein E compare
HP15_2257 +0.6 5.4 transcription-repair-coupling factor compare
HP15_3824 +0.6 2.9 ErfK/YbiS/YcfS/YnhG family protein compare
HP15_652 +0.6 1.4 conserved hypothetical protein compare
HP15_2072 +0.6 2.3 conserved hypothetical protein, secreted compare
HP15_1358 +0.6 3.3 formyltetrahydrofolate deformylase compare
HP15_p42g19 +0.6 2.3 transfer origin protein, TraL compare
HP15_3223 +0.6 3.5 ribosomal protein L11 methyltransferase compare
HP15_3248 +0.6 1.3 tripartite ATP-independent periplasmic transporter, DctQ component compare
HP15_3841 +0.6 4.6 iron(III) ABC transporter permease protein compare
HP15_2548 +0.6 3.7 xanthine/uracil permease family protein compare
HP15_461 +0.6 0.8 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
HP15_466 +0.6 1.6 ATP-dependent protease peptidase subunit compare
HP15_3139 +0.6 3.5 pyrroloquinoline quinone biosynthesis protein PqqC compare
HP15_2697 +0.6 2.1 phenylacetate-CoA oxygenase, PaaG subunit compare
HP15_2410 +0.6 3.1 type IV pilus biogenesis protein PilC compare
HP15_253 +0.6 3.9 extracellular solute-binding protein, family 3 compare
HP15_p42g5 +0.6 2.0 conserved hypothetical protein compare
HP15_3343 +0.6 1.3 conserved hypothetical protein compare
HP15_1603 +0.6 3.4 general secretion pathway protein F compare
HP15_3843 +0.6 2.3 iron(III) ABC transporter, periplasmic iron-compound-binding protein compare
HP15_4132 +0.6 1.9 hypothetical protein compare
HP15_3633 +0.6 1.6 protein-S-isoprenylcysteine methyltransferase compare
HP15_3058 +0.6 2.4 leucine/isoleucine/valine transporter ATP-binding subunit compare
HP15_351 +0.6 3.5 Cl-channel, voltage-gated family protein compare
HP15_635 +0.6 3.1 3-oxoacyl-(acyl carrier protein) synthase I compare
HP15_892 +0.5 1.4 uncharacterized conserved protein UCP029543 compare
HP15_2408 +0.5 2.3 methylation site containing protein compare
HP15_950 +0.5 1.9 RNA polymerase, sigma-24 subunit, ECF subfamily compare
HP15_3057 +0.5 4.6 leucine/isoleucine/valine transporter permease subunit compare
HP15_900 +0.5 1.6 hypothetical protein compare
HP15_407 +0.5 3.8 transporter, major facilitator family compare
HP15_1626 +0.5 0.6 conserved hypothetical protein compare
HP15_1193 +0.5 1.2 conserved hypothetical protein compare
HP15_2496 +0.5 2.0 HflC compare
HP15_1052 +0.5 3.5 peptidase S16, lon domain-containing protein compare
HP15_3601 +0.5 2.7 conserved hypothetical protein, secreted compare
HP15_429 +0.5 3.3 GTP-binding protein TypA compare
HP15_1608 +0.5 2.3 general secretion pathway protein K-like protein compare
HP15_1039 +0.5 3.7 acyl-CoA synthetase compare
HP15_4011 +0.5 1.3 protein containing DUF1232 compare
HP15_905 +0.5 3.1 protein containing helix-turn-helix, AraC domain compare
HP15_1070 +0.5 3.8 TRAP-type uncharacterized transport system, fused permease component compare
HP15_2356 +0.5 2.7 general secretion pathway protein C compare
HP15_678 +0.5 3.4 conserved hypothetical protein compare
HP15_3042 +0.5 3.2 acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
HP15_1087 +0.5 1.2 prophage CP4-57 regulatory compare
HP15_1985 +0.5 2.5 protein containing phage antirepressor protein domain compare
HP15_2307 +0.5 2.7 xanthine/uracil permease compare
HP15_4089 +0.5 3.7 L-lactate dehydrogenase, LutB subunit (from data) compare
HP15_453 +0.5 1.9 thiamine biosynthesis protein thiC compare
HP15_2045 +0.5 3.2 DNA-binding transcriptional repressor FabR compare
HP15_3607 +0.5 4.2 DEAD/DEAH box helicase domain protein compare
HP15_p42g10 +0.5 1.5 KleE protein compare
HP15_1173 +0.5 2.4 membrane-associated zinc metalloprotease compare
HP15_118 +0.5 0.8 hypothetical protein compare
HP15_82 +0.5 2.4 hypothetical protein compare
HP15_692 +0.5 2.1 phage protein compare
HP15_1634 +0.5 2.9 branched-chain alpha-keto acid dehydrogenase complex E1 alpha subunit compare
HP15_3287 +0.5 2.7 phosphoglycolate phosphatase compare
HP15_4105 +0.5 1.8 hypothetical protein compare
HP15_1862 +0.5 2.4 3-oxoacyl-(acyl carrier protein) synthase III compare
HP15_2836 +0.5 1.0 conserved hypothetical protein, membrane compare
HP15_3554 +0.5 0.7 carboxyl-terminal protease-like protein compare
HP15_3840 +0.5 3.1 metallophosphoesterase compare
HP15_1675 +0.5 1.0 hypothetical protein compare
HP15_3478 +0.5 1.6 integron integrase-like protein compare
HP15_2589 +0.5 2.1 NADH:ubiquinone/quinone oxidoreductase, chain 4L compare
HP15_841 +0.5 1.9 YaiI/YqxD-like protein compare
HP15_4051 +0.5 1.4 phenylacetic acid degradation-related protein, thioesterase superfamily compare
HP15_2825 +0.5 1.2 conserved hypothetical protein compare
HP15_1063 +0.5 0.5 protein containing DUF1315 compare
HP15_3203 +0.5 1.8 proline aminopeptidase P II compare
HP15_3619 +0.5 3.4 FAD-dependent pyridine nucleotide-disulfide oxidoreductase compare
HP15_3124 +0.5 3.1 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
HP15_2306 +0.4 1.7 uracil phosphoribosyltransferase compare
HP15_1268 +0.4 1.4 thioredoxin compare
HP15_36 +0.4 1.0 protein containing DUF35 compare


Specific Phenotypes

For 28 genes in this experiment

For stress Aluminum chloride hydrate in Marinobacter adhaerens HP15

For stress Aluminum chloride hydrate across organisms