Experiment set7IT055 for Klebsiella michiganensis M5al

Compare to:

LB with Sodium nitrite 20 mM

200 most important genes:

  gene name fitness t score description  
BWI76_RS01210 -6.2 -4.2 tyrosine recombinase XerC compare
BWI76_RS09660 -4.7 -3.3 DNA translocase FtsK compare
BWI76_RS23240 -4.3 -4.2 exonuclease V subunit gamma compare
BWI76_RS23230 -4.1 -2.8 exodeoxyribonuclease V subunit beta compare
BWI76_RS08385 -3.6 -4.4 citrate (Si)-synthase compare
BWI76_RS16635 -3.1 -4.2 carbonate dehydratase compare
BWI76_RS08430 -3.0 -8.1 succinate--CoA ligase subunit alpha compare
BWI76_RS00180 -2.8 -2.5 F0F1 ATP synthase subunit epsilon compare
BWI76_RS04510 -2.8 -2.2 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS02530 -2.7 -3.3 tRNA dimethylallyltransferase compare
BWI76_RS09645 -2.6 -1.7 thioredoxin-disulfide reductase compare
BWI76_RS05840 -2.5 -4.8 glutamate 5-kinase compare
BWI76_RS20155 -2.4 -2.9 NADH-quinone oxidoreductase subunit I compare
BWI76_RS19010 -2.3 -3.9 polysaccharide pyruvyl transferase yvff compare
BWI76_RS01350 -2.3 -1.4 NAD(P)H-flavin reductase compare
BWI76_RS08425 -2.3 -5.9 succinyl-CoA ligase subunit beta compare
BWI76_RS08395 -2.3 -2.6 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS01200 -2.2 -2.5 diaminopimelate epimerase compare
BWI76_RS08500 -2.2 -3.6 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS20135 -2.2 -6.0 NADH-quinone oxidoreductase subunit M compare
BWI76_RS20150 -2.1 -2.3 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS24900 -2.1 -2.2 DeoR family transcriptional regulator compare
BWI76_RS20180 -2.1 -6.3 NADH-quinone oxidoreductase subunit C/D compare
BWI76_RS26570 -2.0 -3.6 anion permease compare
BWI76_RS16965 -2.0 -3.7 murein lipoprotein compare
BWI76_RS17980 -1.9 -5.0 RNA chaperone ProQ compare
BWI76_RS20170 -1.9 -5.3 NADH-quinone oxidoreductase subunit F compare
BWI76_RS20130 -1.8 -4.7 NADH-quinone oxidoreductase subunit N compare
BWI76_RS11150 -1.8 -1.9 membrane protein compare
BWI76_RS08210 -1.8 -2.7 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS19035 -1.8 -7.0 dTDP-rhamnosyl transferase compare
BWI76_RS20140 -1.7 -5.1 NADH-quinone oxidoreductase subunit L compare
BWI76_RS02815 -1.7 -2.6 fructose-bisphosphatase class I compare
BWI76_RS21450 -1.7 -3.0 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS09970 -1.7 -2.5 porin OmpA compare
BWI76_RS20190 -1.7 -4.8 NADH-quinone oxidoreductase subunit A compare
BWI76_RS20380 -1.6 -1.6 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS00140 -1.6 -1.1 phosphate transport system regulator PhoU compare
BWI76_RS08405 -1.5 -2.1 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS02410 -1.5 -2.2 EF-P beta-lysylation protein EpmB compare
BWI76_RS04705 -1.5 -5.4 DNA-binding transcriptional regulator FruR compare
BWI76_RS25070 -1.5 -1.8 hypothetical protein compare
BWI76_RS03665 -1.5 -1.7 ABC transporter ATP-binding protein compare
BWI76_RS05835 -1.5 -2.7 gamma-glutamyl-phosphate reductase compare
BWI76_RS22625 -1.5 -2.3 transcriptional regulator compare
BWI76_RS17720 -1.5 -1.3 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS25335 -1.4 -2.7 stringent starvation protein A compare
BWI76_RS21070 -1.4 -1.3 outer membrane protein assembly factor BamB compare
BWI76_RS14390 -1.4 -1.6 hypothetical protein compare
BWI76_RS04305 -1.4 -1.2 molecular chaperone DnaJ compare
BWI76_RS21980 -1.4 -2.9 hypothetical protein compare
BWI76_RS27875 -1.3 -1.2 membrane protein compare
BWI76_RS15990 -1.3 -4.6 serine protease compare
BWI76_RS14915 -1.3 -2.5 hypothetical protein compare
BWI76_RS19585 -1.3 -2.6 gentisate 1,2-dioxygenase compare
BWI76_RS16675 -1.3 -1.7 ABC transporter compare
BWI76_RS25600 -1.3 -0.9 tRNA-Thr compare
BWI76_RS18165 -1.3 -1.5 NUDIX pyrophosphatase compare
BWI76_RS20145 -1.3 -1.7 NADH-quinone oxidoreductase subunit K compare
BWI76_RS15660 -1.3 -1.0 hypothetical protein compare
BWI76_RS08495 -1.3 -5.2 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS11700 -1.3 -1.2 hypothetical protein compare
BWI76_RS20160 -1.3 -1.8 NADH-quinone oxidoreductase subunit H compare
BWI76_RS01115 -1.3 -2.1 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS13250 -1.3 -1.2 cytochrome b561 compare
BWI76_RS08205 -1.2 -4.1 DNA-binding transcriptional dual regulator NagC compare
BWI76_RS01885 -1.2 -1.4 CsbD family protein compare
BWI76_RS00240 -1.2 -1.8 FMN-binding protein MioC compare
BWI76_RS12855 -1.2 -1.5 enamine deaminase RidA compare
BWI76_RS23480 -1.2 -6.7 EAL domain-containing protein compare
BWI76_RS00720 -1.2 -2.1 DNA-binding response regulator compare
BWI76_RS16555 -1.2 -2.7 hypothetical protein compare
BWI76_RS21570 -1.2 -2.4 RnfH family protein compare
BWI76_RS26085 -1.2 -1.6 3-dehydroquinate synthase compare
BWI76_RS04645 -1.2 -4.4 3-dehydroquinase compare
BWI76_RS27165 -1.2 -3.1 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS05200 -1.1 -2.5 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS10955 -1.1 -1.7 hypothetical protein compare
BWI76_RS16955 -1.1 -1.0 hypothetical protein compare
BWI76_RS17400 -1.1 -1.2 transporter compare
BWI76_RS20165 -1.1 -2.8 NADH-quinone oxidoreductase subunit G compare
BWI76_RS08725 -1.1 -3.6 Formiminoglutamase (EC 3.5.3.8) (from data) compare
BWI76_RS04530 -1.1 -1.6 peptidylprolyl isomerase SurA compare
BWI76_RS27440 -1.1 -2.9 DNA helicase RecG compare
BWI76_RS23885 -1.1 -1.6 2-octaprenylphenol hydroxylase compare
BWI76_RS16485 -1.1 -1.5 ribonuclease T compare
BWI76_RS26245 -1.1 -2.7 transcriptional regulator compare
BWI76_RS25000 -1.1 -1.5 malonate decarboxylase acyl carrier protein compare
BWI76_RS21235 -1.1 -1.3 hypothetical protein compare
BWI76_RS02745 -1.1 -1.2 hypothetical protein compare
BWI76_RS12090 -1.1 -1.8 HNH endonuclease compare
BWI76_RS01125 -1.1 -3.5 4-alpha-L-fucosyltransferase compare
BWI76_RS13435 -1.0 -1.1 hypothetical protein compare
BWI76_RS04270 -1.0 -3.7 transaldolase compare
BWI76_RS21505 -1.0 -1.1 hypothetical protein compare
BWI76_RS16275 -1.0 -1.6 fumarate hydratase FumA compare
BWI76_RS04875 -1.0 -2.9 transcriptional regulator PdhR compare
BWI76_RS26460 -1.0 -3.9 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS21310 -1.0 -1.0 DNA repair protein RecO compare
BWI76_RS23830 -1.0 -3.7 hypothetical protein compare
BWI76_RS11635 -1.0 -1.2 ABC transporter compare
BWI76_RS15225 -1.0 -4.6 DeoR family transcriptional regulator compare
BWI76_RS12040 -1.0 -1.0 hypothetical protein compare
BWI76_RS25420 -1.0 -3.5 malate dehydrogenase compare
BWI76_RS16570 -1.0 -2.7 catalase compare
BWI76_RS13820 -0.9 -1.0 hypothetical protein compare
BWI76_RS05790 -0.9 -1.3 phage DNA-binding protein compare
BWI76_RS05915 -0.9 -1.3 helix-turn-helix transcriptional regulator compare
BWI76_RS05570 -0.9 -0.9 hypothetical protein compare
BWI76_RS26075 -0.9 -2.3 DNA adenine methylase compare
BWI76_RS12870 -0.9 -1.6 putative phytanoyl-CoA dioxygenase compare
BWI76_RS24945 -0.9 -1.0 glutamine amidotransferase compare
BWI76_RS08390 -0.9 -2.9 hypothetical protein compare
BWI76_RS06525 -0.9 -4.0 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS26455 -0.9 -2.9 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS27425 -0.9 -2.0 DNA-directed RNA polymerase subunit omega compare
BWI76_RS20090 -0.9 -3.5 ribonuclease Z compare
BWI76_RS14650 -0.9 -2.7 helix-turn-helix transcriptional regulator compare
BWI76_RS15835 -0.9 -0.7 hypothetical protein compare
BWI76_RS03080 -0.9 -2.4 (Fe-S)-cluster assembly protein compare
BWI76_RS26980 -0.9 -1.8 cold-shock protein compare
BWI76_RS04715 -0.9 -1.3 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS03880 -0.9 -3.0 homoprotocatechuate degradation operon regulator, HpaR compare
BWI76_RS20475 -0.9 -3.1 phospholipid-binding lipoprotein MlaA compare
BWI76_RS27310 -0.9 -4.8 glycosyltransferase compare
BWI76_RS01800 -0.9 -3.5 glucose-6-phosphate isomerase compare
BWI76_RS01185 -0.9 -2.7 adenylate cyclase compare
BWI76_RS22420 -0.9 -1.9 LacI family transcriptional regulator compare
BWI76_RS07425 -0.9 -3.9 transcriptional regulator compare
BWI76_RS08605 -0.9 -1.9 phosphoglyceromutase compare
BWI76_RS09640 -0.9 -2.5 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS15635 -0.9 -2.0 hypothetical protein compare
BWI76_RS15650 -0.9 -2.8 gp5 compare
BWI76_RS09635 -0.9 -2.1 amino acid ABC transporter ATP-binding protein compare
BWI76_RS19535 -0.9 -1.7 putative integral membrane protein compare
BWI76_RS25220 -0.9 -2.0 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS09015 -0.8 -2.9 aldo/keto reductase compare
BWI76_RS01110 -0.8 -2.0 TDP-fucosamine acetyltransferase compare
BWI76_RS12895 -0.8 -1.5 hypothetical protein compare
BWI76_RS02610 -0.8 -2.7 transcriptional regulator compare
BWI76_RS06535 -0.8 -2.9 endopeptidase La compare
BWI76_RS11190 -0.8 -1.7 putative TetR/AcrR family transcriptional regulatory protein compare
BWI76_RS26890 -0.8 -0.9 hypothetical protein compare
BWI76_RS20565 -0.8 -1.2 hypothetical protein compare
BWI76_RS07675 -0.8 -4.1 DeoR family transcriptional regulator compare
BWI76_RS26045 -0.8 -1.5 nitrite reductase small subunit compare
BWI76_RS26775 -0.8 -2.8 endo-1,4-D-glucanase compare
BWI76_RS23820 -0.8 -1.5 flavodoxin FldB compare
BWI76_RS11810 -0.8 -1.6 outer membrane protein OmpW compare
BWI76_RS06520 -0.8 -3.8 trigger factor compare
BWI76_RS16425 -0.8 -1.0 hypothetical protein compare
BWI76_RS21340 -0.8 -1.5 SoxR reducing system protein RseC compare
BWI76_RS07075 -0.8 -2.0 hypothetical protein compare
BWI76_RS24955 -0.8 -1.8 hypothetical protein compare
BWI76_RS11335 -0.8 -0.9 tautomerase compare
BWI76_RS05120 -0.8 -4.8 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS06475 -0.8 -1.0 protoheme IX farnesyltransferase compare
BWI76_RS24850 -0.8 -3.6 DeoR family transcriptional regulator compare
BWI76_RS08330 -0.8 -1.0 hypothetical protein compare
BWI76_RS15745 -0.8 -2.3 hypothetical protein compare
BWI76_RS17775 -0.8 -1.5 hypothetical protein compare
BWI76_RS06730 -0.8 -2.0 lac repressor compare
BWI76_RS07730 -0.8 -1.0 iron-enterobactin transporter membrane protein compare
BWI76_RS05005 -0.8 -1.8 polynucleotide adenylyltransferase compare
BWI76_RS07705 -0.8 -1.8 enterochelin esterase compare
BWI76_RS20375 -0.8 -1.3 membrane protein compare
BWI76_RS01165 -0.8 -3.4 protoheme IX biogenesis protein HemY compare
BWI76_RS25065 -0.8 -1.4 polyribonucleotide nucleotidyltransferase compare
BWI76_RS18770 -0.8 -0.6 DNA gyrase inhibitor compare
BWI76_RS21075 -0.8 -0.9 membrane protein compare
BWI76_RS12755 -0.8 -1.7 hypothetical protein compare
BWI76_RS11300 -0.7 -0.8 cupin compare
BWI76_RS23340 -0.7 -1.6 transcriptional regulator compare
BWI76_RS27395 -0.7 -2.1 hypothetical protein compare
BWI76_RS23530 -0.7 -1.7 MarR family transcriptional regulator compare
BWI76_RS16315 -0.7 -1.1 SirA-like protein compare
BWI76_RS21370 -0.7 -1.1 ATP-dependent RNA helicase SrmB compare
BWI76_RS09190 -0.7 -2.3 hypothetical protein compare
BWI76_RS00010 -0.7 -3.9 DNA replication and repair protein RecF compare
BWI76_RS24350 -0.7 -1.5 quinol monooxygenase compare
BWI76_RS01120 -0.7 -2.9 O-antigen translocase compare
BWI76_RS15690 -0.7 -1.9 hypothetical protein compare
BWI76_RS19215 -0.7 -1.1 proline-specific peptidase compare
BWI76_RS17975 -0.7 -2.2 tail-specific protease compare
BWI76_RS20390 -0.7 -1.2 erythronate-4-phosphate dehydrogenase compare
BWI76_RS00865 -0.7 -1.7 DNA-binding transcriptional regulator OxyR compare
BWI76_RS16805 -0.7 -1.1 basic amino acid ABC transporter substrate-binding protein compare
BWI76_RS11565 -0.7 -4.7 DeoR family transcriptional regulator compare
BWI76_RS15685 -0.7 -1.2 hypothetical protein compare
BWI76_RS17190 -0.7 -1.0 TonB system transport protein TonB compare
BWI76_RS08885 -0.7 -2.0 transcriptional regulator compare
BWI76_RS08315 -0.7 -1.2 K+-transporting ATPase subunit B compare
BWI76_RS10950 -0.7 -1.4 MFS transporter compare
BWI76_RS01065 -0.7 -2.8 ATP-dependent RNA helicase RhlB compare
BWI76_RS09625 -0.7 -0.9 hypothetical protein compare
BWI76_RS13330 -0.7 -0.9 tellurite resistance methyltransferase TehB compare
BWI76_RS27475 -0.7 -5.0 regulatory protein GntR family protein compare
BWI76_RS25905 -0.7 -1.7 hypothetical protein compare
BWI76_RS18745 -0.7 -1.4 adenosylhomocysteinase compare
BWI76_RS14820 -0.7 -1.2 LysR family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in stress experiments

For stress Sodium nitrite across organisms