Experiment set7IT053 for Marinobacter adhaerens HP15
marine broth with Zinc sulfate heptahydrate 0.5 mM
Group: stressMedia: marine_broth_2216 + Zinc sulfate heptahydrate (0.5 mM)
Culturing: Marino_ML2, 48 well microplate; Tecan Infinite F200, Aerobic, at 25 (C), shaken=orbital
By: Jake on 5/20/2014
Media components: 5 g/L Bacto Peptone, 1 g/L Yeast Extract, 0.1 g/L Ferric citrate, 19.45 g/L Sodium Chloride, 5.9 g/L Magnesium chloride hexahydrate, 3.24 g/L Magnesium sulfate, 1.8 g/L Calcium chloride, 0.55 g/L Potassium Chloride, 0.16 g/L Sodium bicarbonate, 0.08 g/L Potassium bromide, 34 mg/L Strontium chloride, 22 mg/L Boric Acid, 4 mg/L Sodium metasilicate, 2.4 mg/L sodium fluoride, 8 mg/L Disodium phosphate
Growth plate: 929 A5,A6
Specific Phenotypes
For 34 genes in this experiment
For stress Zinc sulfate heptahydrate in Marinobacter adhaerens HP15
For stress Zinc sulfate heptahydrate across organisms
SEED Subsystems
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Glycolysis / Gluconeogenesis
- Galactose metabolism
- Urea cycle and metabolism of amino groups
- Geraniol degradation
- Lysine biosynthesis
- Arginine and proline metabolism
- Tryptophan metabolism
- Glutathione metabolism
- Nucleotide sugars metabolism
- Pyruvate metabolism
- 1- and 2-Methylnaphthalene degradation
- Naphthalene and anthracene degradation
- Limonene and pinene degradation
- Biosynthesis of phenylpropanoids
- Biosynthesis of terpenoids and steroids
- Biosynthesis of alkaloids derived from shikimate pathway
- Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid
- Biosynthesis of alkaloids derived from histidine and purine
- Biosynthesis of alkaloids derived from terpenoid and polyketide
- Biosynthesis of plant hormones
MetaCyc Pathways
Pathways that contain genes with specific phenotypes: