Experiment set7IT053 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

MoLS4 with L-Serine nitrogen source without Molybdate

200 most detrimental genes:

  gene name fitness t score description  
DVU0973 +2.1 1.9 4-hydroxybenzoate octaprenyltransferase, putative (TIGR) compare
DVU2148 +1.4 7.6 CBS/transporter associated domain protein (TIGR) compare
DORF13021 +1.1 3.0 no description compare
DVU1420 +1.0 2.5 Hpt domain protein (TIGR) compare
DVU1571 rho +0.9 1.2 transcription termination factor Rho (TIGR) compare
DVU1264 +0.9 4.9 transglycosylase SLT domain protein (TIGR) compare
DVU2957 +0.8 0.8 hypothetical protein (TIGR) compare
DORF15023 +0.8 1.7 no description compare
DVU3227 +0.8 5.1 flagellar basal body-associated protein, putative (TIGR) compare
DVU1268 +0.8 4.0 hypothetical protein (TIGR) compare
DORF18707 +0.8 0.9 no description compare
DORF10286 +0.8 3.0 no description compare
DVU0315 flgC +0.8 6.4 flagellar basal-body rod protein FlgC (TIGR) compare
DVU0311 +0.8 5.8 flagellar assembly protein FliH, putative (TIGR) compare
DVU1272 gspE +0.8 6.7 general secretion pathway protein E, putative (TIGR) compare
DVU1092 +0.8 6.1 sodium-dependent symporter family protein (TIGR) compare
DVU0314 fliE +0.8 3.3 flagellar basal body component FliE (TIGR) compare
DVU1704 +0.7 1.1 conserved hypothetical protein (TIGR) compare
DVU1063 flrC +0.7 4.5 transcriptional regulatory protein (TIGR) compare
DVU1985 +0.7 1.8 conserved domain protein (TIGR) compare
DVU1275 +0.7 5.0 hypothetical protein (TIGR) compare
DVU0074 +0.7 2.6 polysaccharide biosynthesis domain protein (TIGR) compare
DVU0034 +0.7 3.8 DSBA-like thioredoxin domain protein (TIGR) compare
DVU2566 lysA-2 +0.7 1.9 diaminopimelate decarboxylase (TIGR) compare
DVU0310 fliI +0.7 5.1 flagellum-specific ATP synthase FliI (TIGR) compare
DVU0798 +0.7 1.0 hypothetical protein (TIGR) compare
DVU1267 +0.7 3.0 hypothetical protein (TIGR) compare
DVU1862 +0.7 3.5 GGDEF domain protein (TIGR) compare
DVU0513 flgG +0.7 6.0 flagellar basal-body rod protein FlgG (TIGR) compare
DVU1276 +0.7 5.1 hypothetical protein (TIGR) compare
DVU0514 +0.7 4.6 FlgA family protein (TIGR) compare
DVU0512 flgF +0.7 4.3 flagellar basal-body rod protein, putative (TIGR) compare
DVU2669 +0.6 2.4 conserved domain protein (TIGR) compare
DVU0516 flgI +0.6 5.7 flagellar P-ring protein FlgI (TIGR) compare
DVU1266 +0.6 5.1 hypothetical protein (TIGR) compare
DVU1273 +0.6 4.9 bacterial type II/III secretion system protein (TIGR) compare
DVU0747 cysA +0.6 2.5 ABC transporter, ATP-binding protein (TIGR) compare
DVU0308 +0.6 1.3 membrane protein, putative (TIGR) compare
DVU0913 +0.6 4.0 conserved hypothetical protein (TIGR) compare
DVU3233 flhB +0.6 4.6 flagellar biosynthetic protein FlhB (TIGR) compare
DVU2539 +0.6 0.9 hypothetical protein (TIGR) compare
DORF10446 +0.6 4.3 SEED: FIG00604570: hypothetical protein compare
DVU0339 serA +0.6 4.0 D-isomer specific 2-hydroxyacid dehydrogenase family protein (TIGR) compare
DVU1464 +0.6 4.7 heptosyltransferase family protein (TIGR) compare
DVU2600 +0.6 2.7 hypothetical protein (TIGR) compare
DVU2821 +0.6 1.7 hypothetical protein (TIGR) compare
DVU2062 +0.6 1.7 ATP-dependent DNA helicase, UvrD/REP family (TIGR) compare
DVU0515 flgH +0.6 4.5 flagellar L-ring protein FlgH (TIGR) compare
DVU1377 ilvN-2 +0.6 0.7 acetolactate synthase, small subunit (TIGR) compare
DVU1682 +0.6 1.7 GAF domain protein (TIGR) compare
DVU3232 flhA +0.6 5.1 flagellar biosynthetic protein FlhA (TIGR) compare
DVU1996 +0.6 1.6 quaternary ammonium compound-resistance protein QacC, putative (TIGR) compare
DVU3392 glnA +0.6 4.5 glutamine synthetase, type I (TIGR) compare
DVU3234 +0.6 2.6 flagellar biosynthetic protein FliR (TIGR) compare
DVU0043 fliQ +0.6 2.8 flagellar biosynthetic protein FliQ (TIGR) compare
DVU0045 +0.6 5.0 flagellar biosynthesis protein, FliO, putative (TIGR) compare
DVU0044 fliP +0.6 3.7 flagellar biosynthetic protein fliP (TIGR) compare
DVU0046 fliN +0.6 3.4 flagellar motor switch protein FliN (TIGR) compare
DVU1274 +0.5 2.9 hypothetical protein (TIGR) compare
DVU3364 +0.5 2.5 conserved hypothetical protein (TIGR) compare
DVU1444 flgD +0.5 3.7 basal-body rod modification protein FlgD (TIGR) compare
DVU1434 +0.5 0.7 hypothetical protein (TIGR) compare
DVU1844 +0.5 0.6 septum formation initiator family protein (TIGR) compare
DVU1443 flgE +0.5 3.8 flagellar hook protein FlgE (TIGR) compare
DVU0859 +0.5 3.6 hypothetical protein (TIGR) compare
DVU3133 glpF +0.5 1.6 glycerol uptake facilitator protein (TIGR) compare
DVU0858 +0.5 3.8 lipoprotein, putative (TIGR) compare
DVU2200 +0.5 0.8 hypothetical protein (TIGR) compare
DVU0316 flgB +0.5 1.9 flagellar basal-body rod protein FlgB (TIGR) compare
DVU3360 parB +0.5 3.5 ParB family protein (TIGR) compare
DVU1137 +0.5 1.0 hypothetical protein (TIGR) compare
DVU1271 +0.5 3.3 general secretion pathway protein F, putative (TIGR) compare
DVU1079 trmE +0.5 1.4 tRNA modification GTPase TrmE (TIGR) compare
DVU3032 +0.5 2.4 conserved hypothetical protein (TIGR) compare
DVU2441 hspC +0.5 1.2 heat shock protein, Hsp20 family (TIGR) compare
DVU1263 pppA +0.5 2.4 type IV prepilin-like proteins leader peptidase (TIGR) compare
DORF9585 +0.5 0.9 no description compare
DVU3387 +0.5 3.8 hypothetical protein (TIGR) compare
DVU3118 +0.5 2.5 conserved hypothetical protein (TIGR) compare
DVU1265 +0.5 2.5 hypothetical protein (TIGR) compare
DVU2206 +0.5 2.7 conserved hypothetical protein (TIGR) compare
DVU0642 +0.5 2.1 hydrolase, alpha/beta fold family (TIGR) compare
DVUA0089 +0.5 0.5 hypothetical protein (TIGR) compare
DVU2577 +0.5 2.8 DNA-binding response regulator, LuxR family (TIGR) compare
DORF38058 +0.5 0.7 SEED: FIG00604017: hypothetical protein compare
DVU3393 +0.5 1.0 hypothetical protein (TIGR) compare
DVU0507 +0.5 1.1 conserved hypothetical protein (TIGR) compare
DVU2715 +0.5 2.5 conserved hypothetical protein (TIGR) compare
DVU2894 flrA +0.4 2.9 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU3218 pncA +0.4 2.4 pyrazinamidase/nicotinamidase (TIGR) compare
DORF12455 +0.4 1.8 SEED: helix-turn-helix protein, CopG family compare
DVU2877 +0.4 3.2 hypothetical protein (TIGR) compare
DVU1944 oorD +0.4 1.5 pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative (TIGR) compare
DVU1853 +0.4 0.6 hypothetical protein (TIGR) compare
DVU1762 +0.4 1.5 membrane protein, putative (TIGR) compare
DVU1676 secG +0.4 1.1 preprotein translocase, SecG subunit (TIGR) compare
DVU1752 +0.4 2.7 hypothetical protein (TIGR) compare
DVU3028 +0.4 2.8 iron-sulfur cluster-binding protein (TIGR) compare
DVU2184 +0.4 1.7 DNA-binding domain, excisionase family (TIGR) compare
DVU2896 +0.4 3.6 TPR domain protein (TIGR) compare
DVU0793 +0.4 0.8 hypothetical protein (TIGR) compare
DVU1926 +0.4 1.5 conserved hypothetical protein (TIGR) compare
DVU1183 +0.4 3.3 HD domain protein (TIGR) compare
DVU1961 cheW-3 +0.4 1.1 chemotaxis protein CheW (TIGR) compare
DVU0376 +0.4 1.0 hypothetical protein (TIGR) compare
DVU2283 +0.4 1.1 hypothetical protein (TIGR) compare
DVU3229 fliA +0.4 2.5 RNA polymerase sigma factor for flagellar operon FliA (TIGR) compare
DVU0307 +0.4 2.8 flagella basal body rod domain protein (TIGR) compare
DVU1445 +0.4 2.8 flagellar hook-length control domain protein (TIGR) compare
DVU2510 +0.4 0.4 penicillin-binding protein (TIGR) compare
DVU1567 +0.4 2.2 hypothetical protein (TIGR) compare
DVU1593 cheY-1 +0.4 1.6 chemotaxis protein CheY (TIGR) compare
DVU2400 +0.4 2.7 hydrogenase, putative (TIGR) compare
DVU1900 +0.4 2.0 conserved hypothetical protein (TIGR) compare
DVU3311 +0.4 1.2 hypothetical protein (TIGR) compare
DVU2582 +0.4 2.2 transcriptional regulator, TetR family (TIGR) compare
DVU2012 +0.4 0.6 hypothetical protein (TIGR) compare
DVU0238 +0.4 1.0 hypothetical protein (TIGR) compare
DVU2169 +0.4 2.6 conserved hypothetical protein (TIGR) compare
DVU2203 +0.4 2.2 endoribonuclease, L-PSP family (TIGR) compare
DVU0533 hmcD +0.4 0.6 HmcD, 5.8 kd protein in hmc operon (voordouw) compare
DVU1510 +0.4 0.7 hypothetical protein (TIGR) compare
DVU1727 +0.4 1.2 hypothetical protein (TIGR) compare
DVU1863 +0.4 2.2 flagellar synthesis regulator FleN, putative (TIGR) compare
DVU2794 +0.4 1.6 NADH:quinone oxidoreductase subunit RnfG (Shelley Haveman) compare
DVU1557 +0.4 0.9 hypothetical protein (TIGR) compare
DVU2867 +0.4 0.7 holin (TIGR) compare
DVU0971 +0.4 2.1 molybdenum cofactor biosynthesis protein (TIGR) compare
DVU3331 +0.4 1.3 hypothetical protein (TIGR) compare
DORF8192 +0.4 0.7 SEED: FIG00606834: hypothetical protein compare
DVU0769 +0.4 2.2 pyridoxal kinase, putative (TIGR) compare
DVU2138 +0.4 1.0 conserved hypothetical protein (TIGR) compare
DVU1850 +0.3 0.9 CBS domain protein (TIGR) compare
DVUA0053 +0.3 2.0 conserved hypothetical protein (TIGR) compare
DVU2160 +0.3 2.0 hypothetical protein (TIGR) compare
DVU0320 +0.3 2.1 conserved hypothetical protein (TIGR) compare
DVU1442 +0.3 1.1 flagellin FlaG, putative (TIGR) compare
DVU2059 +0.3 2.4 glycosyl transferase, group 2 family protein (TIGR) compare
DVU1945 oorA +0.3 2.2 pyruvate ferredoxin oxidoreductase, alpha subunit, putative (TIGR) compare
DVU3260 +0.3 1.0 hypothetical protein (TIGR) compare
DVU2391 +0.3 0.3 hypothetical protein (TIGR) compare
DVU0347 +0.3 1.7 transferase, hexapeptide repeat family (TIGR) compare
DVU0703 lepA +0.3 0.4 GTP-binding protein LepA (TIGR) compare
DVU2007 +0.3 1.4 nuclease, putative (TIGR) compare
DVU1412 +0.3 1.5 D-isomer specific 2-hydroxyacid dehydrogenase family protein (TIGR) compare
DVU0395 hit +0.3 1.3 HIT family protein (TIGR) compare
DVU0349 +0.3 2.6 NeuB family protein (TIGR) compare
DVU3310 deaD +0.3 2.0 ATP-dependent RNA helicase, DEAD/DEAH family (TIGR) compare
DVU3024 +0.3 0.5 hypothetical protein (TIGR) compare
DVU0077 +0.3 2.4 conserved hypothetical protein (TIGR) compare
DVU0223 +0.3 0.7 conserved hypothetical protein (TIGR) compare
DORF19331 +0.3 1.5 no description compare
DVU0926 +0.3 1.0 hypothetical protein (TIGR) compare
DVU0092 +0.3 2.4 sensory box histidine kinase (TIGR) compare
DVU0167 oppC +0.3 1.3 oligopeptide/dipeptide ABC transporter, permease protein (TIGR) compare
DVU1726 +0.3 0.6 hypothetical protein (TIGR) compare
DORF19118 +0.3 1.8 SEED: FIG00606735: hypothetical protein compare
DVU0351 +0.3 2.2 cytidine 5monophosphate N-acetylneuraminic acid synthetase, putative/polysaccharide biosynthesis protein (TIGR) compare
DVU0756 +0.3 2.0 TPR domain protein (TIGR) compare
DVU0201 +0.3 1.6 hypothetical protein (TIGR) compare
DVU0612 +0.3 1.9 STAS domain protein (TIGR) compare
DVU3139 +0.3 0.9 bacterial extracellular solute-binding protein, family 3 (TIGR) compare
DVU0313 fliF +0.3 2.5 flagellar M-ring protein FliF (TIGR) compare
DVU1652 hit +0.3 1.1 HIT family protein (TIGR) compare
DVUA0029 +0.3 1.0 hypothetical protein (TIGR) compare
DVU0923 +0.3 1.5 endoribonuclease, L-PSP family (TIGR) compare
DVU0348 +0.3 2.1 hypothetical protein (TIGR) compare
DVU1262 pilT-1 +0.3 1.7 twitching motility protein PilT (TIGR) compare
DVU2829 +0.3 2.3 hypothetical protein (TIGR) compare
DVU2956 flrA +0.3 0.6 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU1600 +0.3 1.6 adenylate cyclase (TIGR) compare
DVU0432 +0.3 0.9 Ech hydrogenase, subunit EchC, putative (TIGR) compare
DVU0906 lipB +0.3 0.9 lipoate-protein ligase B (TIGR) compare
DVU0790 +0.3 1.9 radical SAM protein, TIGR01212 family (TIGR) compare
DVU0802 +0.3 0.3 hypothetical protein (TIGR) compare
DVU0008 +0.3 0.3 hypothetical protein (TIGR) compare
DVU0352 lpsC +0.3 2.2 aminotransferase, DegT/DnrJ/EryC1/StrS family (TIGR) compare
DVU2960 ntrC +0.3 2.3 sigma-54 dependent transcriptional regulator (TIGR) compare
DVU_tRNA-Arg-1 tRNA-Arg +0.3 0.7 tRNA with anticodon ACG for Arg (VIMSS-AUTO) compare
DVU2292 hypA +0.3 0.5 hydrogenase nickel insertion protein HypA (TIGR) compare
DVU0497 +0.3 1.9 hypothetical protein (TIGR) compare
DVU0736 purN +0.3 1.8 phosphoribosylglycinamide formyltransferase (TIGR) compare
DVU3033 +0.3 2.0 iron-sulfur cluster-binding protein (TIGR) compare
DVU1430 +0.3 2.3 peptidase, M16 family (TIGR) compare
DVU0368 +0.3 0.8 hypothetical protein (TIGR) compare
DVU1156 +0.3 1.9 sigma-54 dependent transcriptional regulator, putative/response regulator (TIGR) compare
DVU1261 +0.3 1.9 conserved domain protein (TIGR) compare
DVU0912 +0.3 1.1 conserved domain protein (TIGR) compare
DVU0141 +0.3 1.2 peptidase, M50 family (TIGR) compare
DVU2462 +0.3 1.4 oligopeptide ABC transporter, permease protein (TIGR) compare
DVU2576 +0.3 2.1 oligopeptide ABC transporter, ATP-binding protein (TIGR) compare
DVU3031 +0.3 1.0 conserved hypothetical protein (TIGR) compare
DORF12360 +0.3 0.9 SEED: FIG00605053: hypothetical protein compare
DVU2149 +0.3 2.2 conserved hypothetical protein (TIGR) compare
DVU1143 +0.3 1.4 hypothetical protein (TIGR) compare
DVU3027 glcD +0.3 1.0 glycolate oxidase, subunit GlcD (TIGR) compare
DVU1002 +0.3 1.8 conserved domain protein (TIGR) compare
DVU0974 +0.3 1.1 hypothetical protein (TIGR) compare
DVU2042 +0.2 1.1 Fic family protein (TIGR) compare
DVU0446 +0.2 1.8 sodium/solute symporter family protein (TIGR) compare


Specific Phenotypes

For 2 genes in this experiment

For nitrogen source L-Serine in Desulfovibrio vulgaris Hildenborough JW710

For nitrogen source L-Serine across organisms