Experiment set7IT051 for Pseudomonas fluorescens SBW25-INTG

Compare to:

Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs

Genes with specific phenotypes:

  gene name fitness t score description  
PFLU_RS18955 -1.5 -8.7 hydroxymethylglutaryl-CoA lyase compare
PFLU_RS00730 +1.1 7.0 YdgA family protein compare
PFLU_RS03940 +1.1 6.9 prepilin peptidase compare
PFLU_RS03185 +1.2 8.3 type II and III secretion system protein family protein compare
PFLU_RS03145 +1.3 6.1 peptidase A24 compare
PFLU_RS03190 +1.4 7.3 Flp pilus assembly protein CpaB compare
PFLU_RS03135 +1.4 12.4 PAS domain-containing sensor histidine kinase compare
PFLU_RS03180 +1.4 7.7 hypothetical protein compare
PFLU_RS03130 +1.4 12.9 hypothetical protein compare
PFLU_RS03210 +1.4 9.4 hypothetical protein compare
PFLU_RS03175 +1.4 7.7 CpaF family protein compare
PFLU_RS03140 +1.4 11.8 pilus assembly protein compare
PFLU_RS03165 +1.5 7.5 type II secretion system F family protein compare
PFLU_RS03205 +1.5 13.1 ShlB/FhaC/HecB family hemolysin secretion/activation protein compare
PFLU_RS03150 +1.5 11.0 response regulator transcription factor compare
PFLU_RS03195 +1.5 9.5 Flp family type IVb pilin compare
PFLU_RS03160 +1.5 8.8 tetratricopeptide repeat protein compare
PFLU_RS03170 +1.6 8.3 type II secretion system F family protein compare


Specific phenotypes for soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs across organisms