Experiment set7IT051 for Methanococcus maripaludis S2

Compare to:

Iron excess (5x) , H2 media

200 most important genes:

  gene name fitness t score description  
MMP_RS08720 -5.1 -2.0 4Fe-4S binding protein compare
MMP_RS08715 -4.8 -2.5 formylmethanofuran dehydrogenase subunit B compare
MMP_RS03315 -4.5 -2.1 ferrous iron transport protein A compare
MMP_RS01005 -4.3 -1.6 riboflavin synthase compare
MMP_RS01385 -4.3 -0.8 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS07630 -4.1 -1.9 ATP-binding cassette domain-containing protein compare
MMP_RS01610 -4.1 -5.0 hypothetical protein compare
MMP_RS01175 -4.0 -8.4 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS06625 -3.8 -2.6 DNA primase compare
MMP_RS02900 -3.8 -0.7 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS03475 -3.8 -1.0 hypothetical protein compare
MMP_RS03960 -3.6 -1.4 hypothetical protein compare
MMP_RS01020 -3.6 -1.5 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS00110 -3.5 -3.9 hypothetical protein compare
MMP_RS06885 -3.5 -3.9 50S ribosome-binding GTPase compare
MMP_RS09020 -3.5 -2.5 hypothetical protein compare
MMP_RS03600 -3.5 -3.0 triose-phosphate isomerase compare
MMP_RS02010 -3.5 -11.3 PHP domain-containing protein compare
MMP_RS03445 -3.4 -1.3 methanogenesis marker 17 protein compare
MMP_RS07635 -3.4 -7.7 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS01220 -3.3 -10.8 hypothetical protein compare
MMP_RS01755 -3.3 -1.6 DUF2097 domain-containing protein compare
MMP_RS07545 -3.3 -1.3 HTH domain-containing protein compare
MMP_RS04605 -3.3 -7.3 cobalt ECF transporter T component CbiQ compare
MMP_RS04090 -3.2 -3.1 hypothetical protein compare
MMP_RS01545 -3.2 -1.5 CBS domain-containing protein compare
MMP_RS06355 -3.2 -3.2 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS06020 -3.2 -6.6 archaeoflavoprotein AfpA compare
MMP_RS01500 -3.2 -2.9 CBS domain-containing protein compare
MMP_RS03035 -3.1 -6.2 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS04500 -3.1 -19.3 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS07005 -3.1 -0.8 4Fe-4S binding protein compare
MMP_RS05515 -3.1 -9.3 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS06285 -3.1 -3.2 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS07600 -3.1 -3.2 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS04710 -3.0 -2.6 hypothetical protein compare
MMP_RS01800 -3.0 -5.8 TIGR00303 family protein compare
MMP_RS02240 -3.0 -4.1 methanogenesis marker 7 protein compare
MMP_RS06295 -3.0 -9.7 methanogenesis marker 14 protein compare
MMP_RS02195 -3.0 -4.7 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS03025 -3.0 -7.8 molybdenum cofactor guanylyltransferase compare
MMP_RS04620 -3.0 -14.2 cobalt transporter CbiM compare
MMP_RS04685 -3.0 -4.3 DUF126 domain-containing protein compare
MMP_RS08210 -2.8 -3.2 phosphatidylglycerophosphatase A compare
MMP_RS07845 -2.8 -2.2 LL-diaminopimelate aminotransferase compare
MMP_RS08790 -2.8 -2.8 translation initiation factor IF-2 subunit alpha compare
MMP_RS06120 -2.8 -2.9 UPF0147 family protein compare
MMP_RS03015 -2.8 -12.7 GTP 3' 8-cyclase MoaA compare
MMP_RS08745 -2.8 -10.0 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS04890 -2.8 -1.0 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS06485 -2.8 -1.5 zinc ribbon domain-containing protein compare
MMP_RS04615 -2.7 -6.0 PDGLE domain-containing protein compare
MMP_RS06370 -2.7 -4.5 biotin synthase BioB compare
MMP_RS01225 -2.7 -6.1 DUF5379 domain-containing protein compare
MMP_RS08100 -2.7 -8.7 8-amino-7-oxononanoate synthase compare
MMP_RS04775 -2.7 -4.8 adenosylhomocysteinase compare
MMP_RS02145 -2.7 -9.7 winged helix-turn-helix transcriptional regulator compare
MMP_RS03700 -2.6 -10.8 sodium:proton antiporter compare
MMP_RS00305 -2.6 -2.4 phosphoribosyl-ATP diphosphatase compare
MMP_RS06475 -2.5 -5.9 FAD-dependent oxidoreductase compare
MMP_RS00520 -2.5 -2.6 RNA polymerase Rpb4 family protein compare
MMP_RS08095 -2.5 -7.1 dethiobiotin synthase compare
MMP_RS08105 -2.5 -7.8 6-carboxyhexanoate--CoA ligase compare
MMP_RS06730 -2.5 -2.6 phosphopantothenate/pantothenate synthetase compare
MMP_RS05925 -2.5 -5.1 small nuclear ribonucleoprotein compare
MMP_RS01265 -2.5 -2.2 hypothetical protein compare
MMP_RS06270 -2.4 -8.2 TIGR00300 family protein compare
MMP_RS05555 -2.4 -1.8 DUF4040 domain-containing protein compare
MMP_RS07735 -2.4 -1.3 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS06630 -2.4 -0.9 UPF0058 family protein compare
MMP_RS08635 -2.4 -2.5 UbiA family prenyltransferase compare
MMP_RS06670 -2.3 -8.6 glucose-6-phosphate isomerase compare
MMP_RS00040 -2.3 -5.3 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS05930 -2.3 -3.2 3-isopropylmalate dehydratase large subunit compare
MMP_RS03400 -2.3 -3.4 archease compare
MMP_RS01925 -2.3 -11.7 DUF1616 domain-containing protein compare
MMP_RS02355 -2.3 -4.2 30S ribosomal protein S27ae compare
MMP_RS02875 -2.3 -10.0 chorismate pyruvate-lyase family protein compare
MMP_RS06350 -2.2 -8.0 HesA/MoeB/ThiF family protein compare
MMP_RS08300 -2.2 -1.3 metal-sulfur cluster assembly factor compare
MMP_RS02175 -2.2 -1.0 DUF1611 domain-containing protein compare
MMP_RS05265 -2.2 -2.7 2-isopropylmalate synthase compare
MMP_RS08820 -2.2 -6.8 hypothetical protein compare
MMP_RS07730 -2.2 -2.1 pyruvate synthase subunit beta compare
MMP_RS05250 -2.2 -2.2 NFYB/HAP3 family transcription factor subunit compare
MMP_RS05815 -2.2 -2.8 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS06400 -2.1 -1.7 4Fe-4S binding protein compare
MMP_RS00750 -2.1 -2.9 fumarate hydratase compare
MMP_RS08650 -2.1 -3.7 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS07750 -2.1 -4.8 DUF357 domain-containing protein compare
MMP_RS03250 -2.1 -4.0 MJ1244 family protein compare
MMP_RS03435 -2.1 -1.8 ketol-acid reductoisomerase compare
MMP_RS07645 -2.1 -6.0 aldehyde dehydrogenase family protein compare
MMP_RS01900 -2.0 -14.0 hypothetical protein compare
MMP_RS04780 -2.0 -4.3 ribonuclease P compare
MMP_RS02800 -2.0 -5.3 nucleotidyltransferase domain-containing protein compare
MMP_RS07860 -2.0 -1.1 hypothetical protein compare
MMP_RS01830 -2.0 -1.8 tRNA-Val compare
MMP_RS07200 -2.0 -5.2 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS06895 -2.0 -2.4 selenocysteine-specific translation elongation factor compare
MMP_RS03580 -2.0 -3.6 signal recognition particle-docking protein FtsY compare
MMP_RS06925 -2.0 -2.7 ribonuclease VapC4 compare
MMP_RS05845 -2.0 -2.3 tRNA-intron lyase compare
MMP_RS07380 -1.9 -2.7 transcription elongation factor Spt5 compare
MMP_RS04720 -1.9 -3.1 DedA family protein compare
MMP_RS00515 -1.9 -1.1 DUF655 domain-containing protein compare
MMP_RS07755 -1.9 -1.5 DUF555 domain-containing protein compare
MMP_RS01380 -1.9 -4.6 PHP domain-containing protein compare
MMP_RS08460 -1.9 -2.4 proteasome-activating nucleotidase compare
MMP_RS00985 -1.9 -5.6 CDC48 family AAA ATPase compare
MMP_RS06725 -1.9 -8.4 hypothetical protein compare
MMP_RS08440 -1.8 -2.4 cell division protein SepF compare
MMP_RS03440 -1.8 -1.5 MoaD/ThiS family protein compare
MMP_RS08435 -1.8 -2.4 Era-like GTP-binding protein compare
MMP_RS00810 -1.8 -7.4 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS01725 -1.8 -3.9 class I SAM-dependent methyltransferase family protein compare
MMP_RS07540 -1.8 -3.6 CBS domain-containing protein compare
MMP_RS00685 -1.7 -4.7 2-phospho-L-lactate guanylyltransferase compare
MMP_RS06130 -1.7 -4.0 peptidylprolyl isomerase compare
MMP_RS06940 -1.7 -3.0 polyprenyl diphosphate synthase compare
MMP_RS01905 -1.7 -11.1 glycosyltransferase compare
MMP_RS02135 -1.7 -3.5 DUF5612 domain-containing protein compare
MMP_RS01875 -1.7 -8.2 N-acetyltransferase compare
MMP_RS07195 -1.7 -7.0 M20 family metallo-hydrolase compare
MMP_RS07710 -1.7 -7.5 cell division protein FtsZ compare
MMP_RS05540 -1.7 -2.8 hypothetical protein compare
MMP_RS01880 -1.6 -7.0 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS07075 -1.6 -3.7 phosphomannomutase/phosphoglucomutase compare
MMP_RS00300 -1.6 -0.7 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS03145 -1.6 -6.9 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS01885 -1.6 -5.6 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS01665 -1.6 -3.3 DUF2111 domain-containing protein compare
MMP_RS07575 -1.6 -3.1 RNA ligase partner protein compare
MMP_RS01325 -1.6 -2.0 dihydroneopterin aldolase family protein compare
MMP_RS05550 -1.6 -0.8 cation:proton antiporter compare
MMP_RS01960 -1.6 -1.1 hypothetical protein compare
MMP_RS03140 -1.5 -10.1 hypothetical protein compare
MMP_RS04955 -1.5 -5.4 DNA topoisomerase I compare
MMP_RS06980 -1.5 -5.6 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS04585 -1.5 -7.4 AIR synthase related protein compare
MMP_RS07955 -1.5 -4.8 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS07420 -1.5 -3.2 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS06340 -1.5 -5.7 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS02345 -1.5 -2.0 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS03550 -1.5 -1.5 DUF2124 domain-containing protein compare
MMP_RS05440 -1.5 -6.9 winged helix-turn-helix transcriptional regulator compare
MMP_RS07435 -1.5 -2.1 GMP synthase subunit A compare
MMP_RS01795 -1.5 -1.5 methanogenesis marker 6 protein compare
MMP_RS07525 -1.4 -7.1 4Fe-4S binding protein compare
MMP_RS07605 -1.4 -3.4 diadenylate cyclase compare
MMP_RS01840 -1.4 -6.5 TIGR00289 family protein compare
MMP_RS03640 -1.4 -3.3 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS02340 -1.4 -1.7 DNA-directed RNA polymerase subunit E'' compare
MMP_RS07390 -1.4 -2.1 cell division protein FtsZ compare
MMP_RS08330 -1.4 -4.0 NADH-quinone oxidoreductase subunit H compare
MMP_RS08785 -1.4 -0.9 RNA-protein complex protein Nop10 compare
MMP_RS05460 -1.4 -6.3 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS05345 -1.4 -5.8 hypothetical protein compare
MMP_RS01100 -1.4 -1.3 ABC transporter ATP-binding protein compare
MMP_RS00735 -1.4 -3.3 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS07555 -1.3 -0.6 monovalent cation/H+ antiporter subunit E compare
MMP_RS02245 -1.3 -3.1 hypothetical protein compare
MMP_RS01975 -1.3 -9.6 hypothetical protein compare
MMP_RS06900 -1.3 -2.9 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS06975 -1.3 -1.8 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS05835 -1.3 -0.8 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS01910 -1.3 -7.9 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS05425 -1.3 -3.4 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS00915 -1.3 -4.5 DUF116 domain-containing protein compare
MMP_RS04485 -1.3 -7.4 putative beta-lysine N-acetyltransferase compare
MMP_RS01890 -1.3 -4.3 nucleotide sugar dehydrogenase compare
MMP_RS00720 -1.3 -4.7 metal-dependent hydrolase compare
MMP_RS01970 -1.2 -8.4 TIGR04279 domain-containing protein compare
MMP_RS05640 -1.2 -4.4 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS05430 -1.2 -3.1 TIGR00288 family NYN domain-containing protein compare
MMP_RS08595 -1.2 -1.0 flagellar protein C compare
MMP_RS08195 -1.2 -5.3 hypothetical protein compare
MMP_RS06105 -1.2 -4.7 hydrogenase maturation peptidase HycI compare
MMP_RS00695 -1.2 -0.9 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS00325 -1.2 -1.7 RNA-binding protein compare
MMP_RS01030 -1.2 -2.9 MTAP family purine nucleoside phosphorylase compare
MMP_RS03095 -1.2 -3.7 diphthine synthase compare
MMP_RS07580 -1.2 -1.7 DUF356 domain-containing protein compare
MMP_RS03205 -1.2 -1.4 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS01440 -1.1 -2.8 NAAT family transporter compare
MMP_RS05280 -1.1 -5.3 COG1361 S-layer family protein compare
MMP_RS01895 -1.1 -7.9 flippase compare
MMP_RS00060 -1.1 -1.4 3-dehydroquinate synthase II compare
MMP_RS05525 -1.1 -3.9 calcium/sodium antiporter compare
MMP_RS08445 -1.1 -3.0 DUF2099 family protein compare
MMP_RS01955 -1.1 -2.9 hypothetical protein compare
MMP_RS00895 -1.1 -2.2 hypothetical protein compare
MMP_RS00320 -1.1 -1.5 class I SAM-dependent methyltransferase compare
MMP_RS00315 -1.1 -4.9 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS00115 -1.1 -6.6 radical SAM protein compare
MMP_RS07695 -1.1 -3.7 DUF3236 domain-containing protein compare
MMP_RS07090 -1.1 -5.6 tRNA (adenine-N1)-methyltransferase compare
MMP_RS01045 -1.1 -5.0 diphthamide biosynthesis enzyme Dph2 compare
MMP_RS00675 -1.1 -0.9 nitroreductase family protein compare
MMP_RS00965 -1.1 -3.0 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in iron experiments

For iron Iron (II) chloride tetrahydrate across organisms