Experiment set7IT050 for Methanococcus maripaludis S2

Compare to:

Iron excess (5x) , H2 media

200 most important genes:

  gene name fitness t score description  
MMP_RS03475 -4.8 -0.9 hypothetical protein compare
MMP_RS08720 -4.8 -2.6 4Fe-4S binding protein compare
MMP_RS00110 -4.7 -4.2 hypothetical protein compare
MMP_RS02240 -4.6 -4.8 methanogenesis marker 7 protein compare
MMP_RS08435 -4.5 -3.4 Era-like GTP-binding protein compare
MMP_RS01385 -4.3 -0.8 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS02280 -4.3 -1.1 DUF211 domain-containing protein compare
MMP_RS07845 -3.9 -3.1 LL-diaminopimelate aminotransferase compare
MMP_RS07630 -3.9 -2.2 ATP-binding cassette domain-containing protein compare
MMP_RS03315 -3.9 -2.1 ferrous iron transport protein A compare
MMP_RS02900 -3.9 -0.7 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS06355 -3.8 -4.3 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS01545 -3.8 -1.4 CBS domain-containing protein compare
MMP_RS01795 -3.7 -2.6 methanogenesis marker 6 protein compare
MMP_RS01175 -3.7 -6.0 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS07600 -3.7 -3.5 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS06730 -3.6 -2.9 phosphopantothenate/pantothenate synthetase compare
MMP_RS04605 -3.6 -7.3 cobalt ECF transporter T component CbiQ compare
MMP_RS06400 -3.6 -2.2 4Fe-4S binding protein compare
MMP_RS04890 -3.6 -1.0 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS02010 -3.5 -13.4 PHP domain-containing protein compare
MMP_RS08650 -3.5 -4.1 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS06120 -3.4 -3.3 UPF0147 family protein compare
MMP_RS08300 -3.4 -1.5 metal-sulfur cluster assembly factor compare
MMP_RS07635 -3.4 -10.5 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS03640 -3.4 -5.0 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS06295 -3.4 -8.7 methanogenesis marker 14 protein compare
MMP_RS03600 -3.3 -3.2 triose-phosphate isomerase compare
MMP_RS04500 -3.3 -18.0 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS04615 -3.2 -5.4 PDGLE domain-containing protein compare
MMP_RS07005 -3.2 -0.8 4Fe-4S binding protein compare
MMP_RS03025 -3.2 -8.4 molybdenum cofactor guanylyltransferase compare
MMP_RS02145 -3.2 -11.3 winged helix-turn-helix transcriptional regulator compare
MMP_RS00695 -3.2 -1.2 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS01020 -3.1 -1.5 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS00305 -3.1 -2.5 phosphoribosyl-ATP diphosphatase compare
MMP_RS08095 -3.1 -9.7 dethiobiotin synthase compare
MMP_RS04710 -3.1 -2.4 hypothetical protein compare
MMP_RS03435 -3.0 -2.2 ketol-acid reductoisomerase compare
MMP_RS00040 -3.0 -5.6 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS01195 -3.0 -1.7 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS01610 -3.0 -5.3 hypothetical protein compare
MMP_RS06285 -3.0 -3.7 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS03445 -3.0 -1.3 methanogenesis marker 17 protein compare
MMP_RS04620 -2.9 -14.7 cobalt transporter CbiM compare
MMP_RS01005 -2.9 -2.1 riboflavin synthase compare
MMP_RS05515 -2.9 -7.8 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS08715 -2.9 -2.5 formylmethanofuran dehydrogenase subunit B compare
MMP_RS01800 -2.8 -4.3 TIGR00303 family protein compare
MMP_RS08790 -2.8 -2.8 translation initiation factor IF-2 subunit alpha compare
MMP_RS07075 -2.8 -7.4 phosphomannomutase/phosphoglucomutase compare
MMP_RS01380 -2.8 -5.8 PHP domain-containing protein compare
MMP_RS05815 -2.8 -2.9 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS02195 -2.8 -5.2 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS06895 -2.8 -2.3 selenocysteine-specific translation elongation factor compare
MMP_RS07750 -2.8 -4.6 DUF357 domain-containing protein compare
MMP_RS06370 -2.8 -5.6 biotin synthase BioB compare
MMP_RS04685 -2.7 -3.7 DUF126 domain-containing protein compare
MMP_RS03015 -2.7 -8.0 GTP 3' 8-cyclase MoaA compare
MMP_RS07545 -2.7 -1.4 HTH domain-containing protein compare
MMP_RS07200 -2.7 -7.3 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS06270 -2.7 -6.8 TIGR00300 family protein compare
MMP_RS08100 -2.6 -7.1 8-amino-7-oxononanoate synthase compare
MMP_RS01960 -2.6 -1.4 hypothetical protein compare
MMP_RS04090 -2.6 -3.4 hypothetical protein compare
MMP_RS06475 -2.6 -6.7 FAD-dependent oxidoreductase compare
MMP_RS01700 -2.6 -0.9 dihydroxy-acid dehydratase compare
MMP_RS00520 -2.6 -2.0 RNA polymerase Rpb4 family protein compare
MMP_RS07755 -2.5 -1.7 DUF555 domain-containing protein compare
MMP_RS08745 -2.5 -7.7 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS02345 -2.5 -4.8 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS00750 -2.5 -2.4 fumarate hydratase compare
MMP_RS03400 -2.5 -3.9 archease compare
MMP_RS01755 -2.4 -2.1 DUF2097 domain-containing protein compare
MMP_RS02875 -2.4 -10.6 chorismate pyruvate-lyase family protein compare
MMP_RS01220 -2.4 -11.0 hypothetical protein compare
MMP_RS03700 -2.4 -11.6 sodium:proton antiporter compare
MMP_RS06020 -2.4 -5.6 archaeoflavoprotein AfpA compare
MMP_RS08635 -2.4 -2.4 UbiA family prenyltransferase compare
MMP_RS06350 -2.3 -9.7 HesA/MoeB/ThiF family protein compare
MMP_RS01325 -2.3 -2.5 dihydroneopterin aldolase family protein compare
MMP_RS06625 -2.3 -2.3 DNA primase compare
MMP_RS08210 -2.3 -3.0 phosphatidylglycerophosphatase A compare
MMP_RS07555 -2.3 -0.8 monovalent cation/H+ antiporter subunit E compare
MMP_RS08105 -2.3 -7.0 6-carboxyhexanoate--CoA ligase compare
MMP_RS01265 -2.3 -2.0 hypothetical protein compare
MMP_RS07355 -2.2 -1.2 transcription factor S compare
MMP_RS05540 -2.2 -4.1 hypothetical protein compare
MMP_RS01830 -2.2 -1.9 tRNA-Val compare
MMP_RS05925 -2.2 -4.6 small nuclear ribonucleoprotein compare
MMP_RS01875 -2.2 -10.1 N-acetyltransferase compare
MMP_RS04775 -2.2 -4.1 adenosylhomocysteinase compare
MMP_RS06670 -2.1 -6.4 glucose-6-phosphate isomerase compare
MMP_RS00300 -2.1 -0.8 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS05265 -2.1 -2.1 2-isopropylmalate synthase compare
MMP_RS01225 -2.1 -6.6 DUF5379 domain-containing protein compare
MMP_RS03440 -2.1 -1.6 MoaD/ThiS family protein compare
MMP_RS07645 -2.1 -8.6 aldehyde dehydrogenase family protein compare
MMP_RS06900 -2.1 -3.4 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS06925 -2.1 -3.0 ribonuclease VapC4 compare
MMP_RS08330 -2.1 -6.9 NADH-quinone oxidoreductase subunit H compare
MMP_RS01880 -2.0 -8.2 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS07735 -2.0 -1.2 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS07540 -2.0 -5.9 CBS domain-containing protein compare
MMP_RS07420 -2.0 -4.0 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS08820 -2.0 -6.6 hypothetical protein compare
MMP_RS06340 -2.0 -6.7 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS05430 -2.0 -5.5 TIGR00288 family NYN domain-containing protein compare
MMP_RS01925 -1.9 -9.5 DUF1616 domain-containing protein compare
MMP_RS03140 -1.9 -10.2 hypothetical protein compare
MMP_RS01725 -1.9 -4.4 class I SAM-dependent methyltransferase family protein compare
MMP_RS07710 -1.9 -8.1 cell division protein FtsZ compare
MMP_RS02245 -1.9 -4.4 hypothetical protein compare
MMP_RS02800 -1.9 -6.5 nucleotidyltransferase domain-containing protein compare
MMP_RS07730 -1.9 -2.2 pyruvate synthase subunit beta compare
MMP_RS04780 -1.8 -2.8 ribonuclease P compare
MMP_RS05640 -1.8 -7.5 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS06940 -1.8 -3.1 polyprenyl diphosphate synthase compare
MMP_RS00060 -1.8 -2.4 3-dehydroquinate synthase II compare
MMP_RS05280 -1.8 -8.1 COG1361 S-layer family protein compare
MMP_RS01905 -1.8 -11.1 glycosyltransferase compare
MMP_RS05550 -1.8 -0.9 cation:proton antiporter compare
MMP_RS01500 -1.8 -2.5 CBS domain-containing protein compare
MMP_RS03035 -1.7 -3.6 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS05845 -1.7 -1.8 tRNA-intron lyase compare
MMP_RS01900 -1.7 -10.7 hypothetical protein compare
MMP_RS00895 -1.7 -3.8 hypothetical protein compare
MMP_RS07380 -1.7 -2.4 transcription elongation factor Spt5 compare
MMP_RS06725 -1.7 -8.4 hypothetical protein compare
MMP_RS01840 -1.7 -6.3 TIGR00289 family protein compare
MMP_RS03145 -1.7 -7.0 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS00985 -1.7 -4.9 CDC48 family AAA ATPase compare
MMP_RS00685 -1.7 -3.9 2-phospho-L-lactate guanylyltransferase compare
MMP_RS07195 -1.7 -7.3 M20 family metallo-hydrolase compare
MMP_RS04720 -1.7 -2.6 DedA family protein compare
MMP_RS03250 -1.6 -4.1 MJ1244 family protein compare
MMP_RS05250 -1.6 -1.7 NFYB/HAP3 family transcription factor subunit compare
MMP_RS08840 -1.6 -8.2 class I SAM-dependent methyltransferase compare
MMP_RS06980 -1.6 -5.9 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS01975 -1.6 -11.1 hypothetical protein compare
MMP_RS05920 -1.6 -0.4 50S ribosomal protein L37e compare
MMP_RS04585 -1.6 -7.9 AIR synthase related protein compare
MMP_RS01885 -1.6 -6.9 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS05285 -1.6 -8.3 MMPL family transporter compare
MMP_RS07390 -1.6 -2.9 cell division protein FtsZ compare
MMP_RS00810 -1.6 -5.3 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS08440 -1.5 -2.2 cell division protein SepF compare
MMP_RS05345 -1.5 -5.4 hypothetical protein compare
MMP_RS01955 -1.5 -3.4 hypothetical protein compare
MMP_RS05245 -1.5 -7.3 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS07435 -1.5 -2.0 GMP synthase subunit A compare
MMP_RS06230 -1.5 -2.5 helix-turn-helix domain-containing protein compare
MMP_RS03205 -1.5 -1.5 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS06885 -1.5 -2.4 50S ribosome-binding GTPase compare
MMP_RS01890 -1.5 -4.0 nucleotide sugar dehydrogenase compare
MMP_RS00720 -1.4 -5.9 metal-dependent hydrolase compare
MMP_RS08195 -1.4 -5.7 hypothetical protein compare
MMP_RS08605 -1.4 -4.6 flagellar protein E compare
MMP_RS00915 -1.4 -4.6 DUF116 domain-containing protein compare
MMP_RS09020 -1.4 -1.7 hypothetical protein compare
MMP_RS01970 -1.4 -7.9 TIGR04279 domain-containing protein compare
MMP_RS02135 -1.4 -4.9 DUF5612 domain-containing protein compare
MMP_RS03960 -1.4 -1.0 hypothetical protein compare
MMP_RS01895 -1.4 -8.0 flippase compare
MMP_RS00050 -1.4 -4.9 AarF/UbiB family protein compare
MMP_RS08445 -1.4 -2.7 DUF2099 family protein compare
MMP_RS06840 -1.4 -0.9 DNA-directed RNA polymerase subunit N compare
MMP_RS08600 -1.3 -2.3 flagellar protein D compare
MMP_RS05930 -1.3 -2.0 3-isopropylmalate dehydratase large subunit compare
MMP_RS00850 -1.3 -3.5 TIGR01177 family methyltransferase compare
MMP_RS01910 -1.3 -7.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS07580 -1.3 -2.4 DUF356 domain-containing protein compare
MMP_RS01915 -1.3 -7.5 DUF354 domain-containing protein compare
MMP_RS00965 -1.3 -1.7 hypothetical protein compare
MMP_RS06525 -1.3 -1.4 YciI family protein compare
MMP_RS03080 -1.2 -1.8 universal stress protein compare
MMP_RS04955 -1.2 -4.1 DNA topoisomerase I compare
MMP_RS05440 -1.2 -5.7 winged helix-turn-helix transcriptional regulator compare
MMP_RS08785 -1.2 -0.9 RNA-protein complex protein Nop10 compare
MMP_RS08590 -1.2 -3.5 flagellin compare
MMP_RS03580 -1.2 -1.9 signal recognition particle-docking protein FtsY compare
MMP_RS03095 -1.2 -3.8 diphthine synthase compare
MMP_RS05865 -1.2 -2.3 hypothetical protein compare
MMP_RS00515 -1.2 -0.7 DUF655 domain-containing protein compare
MMP_RS00730 -1.2 -2.3 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS00735 -1.2 -3.4 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS07955 -1.2 -3.6 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS01180 -1.2 -2.2 XTP/dITP diphosphatase compare
MMP_RS04485 -1.2 -8.1 putative beta-lysine N-acetyltransferase compare
MMP_RS00115 -1.1 -6.1 radical SAM protein compare
MMP_RS04125 -1.1 -2.1 TetR/AcrR family transcriptional regulator compare
MMP_RS07090 -1.1 -4.9 tRNA (adenine-N1)-methyltransferase compare
MMP_RS07525 -1.1 -5.0 4Fe-4S binding protein compare
MMP_RS07900 -1.1 -1.8 YeeE/YedE family protein compare
MMP_RS07575 -1.1 -2.4 RNA ligase partner protein compare
MMP_RS05460 -1.1 -6.2 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS06770 -1.1 -4.3 DHH family phosphoesterase compare
MMP_RS05555 -1.1 -0.9 DUF4040 domain-containing protein compare
MMP_RS03155 -1.1 -3.6 precorrin-6A reductase compare
MMP_RS01440 -1.1 -2.8 NAAT family transporter compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in iron experiments

For iron Iron (II) chloride tetrahydrate across organisms