Experiment set7IT049 for Phaeobacter inhibens DSM 17395

Compare to:

marine broth with MreB Perturbing Compound A22 0.02 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
PGA1_c24220 +1.1 3.1 ornithine carbamoyltransferase ArgF compare
PGA1_c17050 +1.1 4.1 N-acetyl-gamma-glutamyl-phosphate reductase ArgC compare
PGA1_262p00610 +1.0 1.8 metallophosphoesterase compare
PGA1_c13510 +0.9 2.1 hypothetical protein compare
PGA1_c06670 +0.9 4.7 carbamoyl-phosphate synthase small chain compare
PGA1_c02050 +0.9 3.0 acetylglutamate kinase ArgB compare
PGA1_c24230 +0.9 5.6 acetylornithine aminotransferase ArgD compare
PGA1_c06420 +0.9 3.4 acetyltransferase domain-containing protein compare
PGA1_c24560 +0.8 5.8 carbamoyl-phosphate synthase large chain compare
PGA1_c15380 +0.8 2.0 Uncharacterized conserved protein compare
PGA1_c19100 +0.8 2.4 hypothetical protein compare
PGA1_c34650 +0.8 2.2 UPF0090 protein YhbC compare
PGA1_c05470 +0.8 1.8 hydroxyisourate hydrolase compare
PGA1_262p01410 +0.8 2.7 malate/L-lactate dehydrogenase-like protein compare
PGA1_c35770 +0.7 2.2 putative flagella basal body P-ring formation protein FlgA compare
PGA1_65p00450 +0.7 2.9 UDP-glucose 6-dehydrogenase Ugd compare
PGA1_c30900 +0.7 3.2 hypothetical protein compare
PGA1_c24410 +0.7 1.6 hypothetical protein compare
PGA1_c18380 +0.7 1.4 Phage Head-Tail Attachment. compare
PGA1_c36270 +0.6 2.1 hypothetical protein compare
PGA1_262p00920 +0.6 2.7 Membrane proteins related to metalloendopeptidases compare
PGA1_c32710 +0.6 1.7 Protein of unknown function (DUF3775). compare
PGA1_c11400 +0.6 2.6 ferric uptake regulation protein Fur compare
PGA1_c27890 +0.6 3.6 Glucosamine-6-phosphate deaminase [isomerizing], alternative (EC 3.5.99.6) (from data) compare
PGA1_c35260 +0.6 1.7 ATP-dependent protease HslV compare
PGA1_262p00950 +0.6 1.2 thioesterase superfamily protein TdaD compare
PGA1_c07710 +0.6 1.9 putative sulfopyruvate decarboxylase subunit alpha compare
PGA1_c08780 +0.5 1.4 hypothetical protein compare
PGA1_262p00960 +0.5 5.3 Prephenate dehydratase. compare
PGA1_c04070 +0.5 3.7 phenylacetic acid degradation protein PaaB compare
PGA1_c34120 +0.5 1.2 HTH-type transcriptional regulator PetP compare
PGA1_c01080 +0.5 1.5 Uncharacterized conserved protein compare
PGA1_c06160 +0.5 2.0 hypothetical protein compare
PGA1_c15740 +0.5 1.9 phosphate transport system protein PhoU compare
PGA1_c14760 +0.5 1.1 bifunctional enzyme IspDF compare
PGA1_c13750 +0.5 2.7 phosphopantetheine binding protein compare
PGA1_c21000 +0.5 2.6 Predicted integral membrane protein (DUF2282). compare
PGA1_262p00450 +0.5 1.7 glucose transporter, ATPase component (from data) compare
PGA1_c14890 +0.5 1.5 Uncharacterized conserved protein compare
PGA1_c13110 +0.5 2.2 putative nitrilotriacetate monooxygenase component B compare
PGA1_c08590 +0.5 3.5 heme NO binding domain-containing protein compare
PGA1_262p00910 +0.5 1.1 putative cation transort protein compare
PGA1_c27060 +0.5 2.1 putative signal transduction histidine kinase compare
PGA1_78p00270 +0.5 1.7 lipoyl synthase LipA compare
PGA1_c31780 +0.5 1.5 DNA polymerase I compare
PGA1_c15590 +0.5 4.3 putative transcriptional activator protein compare
PGA1_c36020 +0.5 0.8 putative 3'-5'-exonuclease compare
PGA1_c08600 +0.5 3.6 diguanylate cyclase (GGDEF) domain-containing protein compare
PGA1_262p01800 +0.5 2.1 putative membrane dipeptidase compare
PGA1_c33190 +0.5 2.4 putative anti-sigma-B factor antagonist compare
PGA1_c18490 +0.4 4.0 Predicted ATPase compare
PGA1_262p00250 +0.4 1.6 ferritin-like protein compare
PGA1_c29670 +0.4 1.6 small heat shock protein IbpA compare
PGA1_262p01060 +0.4 1.3 Protein of unknown function (DUF995). compare
PGA1_c09410 +0.4 1.4 hypothetical protein compare
PGA1_c34770 +0.4 2.8 Uncharacterized protein conserved in bacteria compare
PGA1_c12550 +0.4 1.3 hypothetical protein compare
PGA1_262p00930 +0.4 1.9 hypothetical protein compare
PGA1_c31930 +0.4 3.3 putative transporter, MFS family compare
PGA1_262p00660 +0.4 1.6 Predicted periplasmic protein compare
PGA1_c30470 +0.4 2.2 mandelate racemase / muconate lactonizing enzyme compare
PGA1_262p00810 +0.4 2.1 putative flavoprotein, HFCD family compare
PGA1_c17680 +0.4 1.2 hypothetical protein compare
PGA1_c09470 +0.4 2.3 putative ATP-binding protein compare
PGA1_c15760 +0.4 2.1 putative phosphate transport system permease protein PstA compare
PGA1_c34400 +0.4 2.2 aminotransferase class-III compare
PGA1_c18480 +0.4 3.6 hypothetical protein compare
PGA1_c17830 +0.4 1.2 putative gene transfer agent prohead protease compare
PGA1_c12390 +0.4 0.6 putative protein SoxS compare
PGA1_c15660 +0.4 2.3 enoyl-CoA hydratase/isomerase family protein compare
PGA1_c03040 +0.4 2.4 hypothetical protein compare
PGA1_c29320 +0.4 1.8 putative endoribonuclease L-PSP compare
PGA1_c06210 +0.4 1.5 probable succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A compare
PGA1_262p01110 +0.4 1.6 hypothetical protein compare
PGA1_c33610 +0.4 2.3 hypothetical protein compare
PGA1_65p00370 +0.4 1.3 putative glycosyl transferase compare
PGA1_c05560 +0.4 1.2 glycine cleavage system protein GcvH compare
PGA1_65p00280 +0.4 1.2 Protein of unknown function (DUF2793)./Domain of unknown function (DUF3476). compare
PGA1_c32230 +0.4 1.5 putative 5-carboxymethyl-2-hydroxymuconate delta-isomerase compare
PGA1_c10100 +0.4 1.4 putative glutathione transport system permease protein GsiD compare
PGA1_c19090 +0.4 1.2 Protein required for attachment to host cells compare
PGA1_c08890 +0.4 1.9 putative capsule polysaccharide export outer membrane protein compare
PGA1_c30000 +0.4 1.6 ATP-dependent Clp protease adaptor protein ClpS compare
PGA1_c29690 +0.3 1.9 serine protease-like protein compare
PGA1_c22510 +0.3 1.6 hypothetical protein compare
PGA1_c04050 +0.3 2.3 phenylacetic acid degradation protein PaaD compare
PGA1_262p01540 +0.3 1.0 putative enoyl-CoA hydratase / isomerase compare
PGA1_c19870 +0.3 1.1 hypothetical protein compare
PGA1_c23930 +0.3 2.0 putative histidinol-phosphate aminotransferase compare
PGA1_c31970 +0.3 1.6 peptidyl-tRNA hydrolase-like protein compare
PGA1_c22860 +0.3 1.5 hypothetical protein compare
PGA1_c34940 +0.3 1.4 Putative sterol carrier protein compare
PGA1_78p00250 +0.3 0.8 putative HTH-type transcriptional regulator compare
PGA1_c08450 +0.3 0.8 Predicted membrane protein (DUF2061). compare
PGA1_c29530 +0.3 2.3 Protein of unknown function (DUF1523). compare
PGA1_c06170 +0.3 1.4 hypothetical protein compare
PGA1_c29000 +0.3 1.2 inner membrane lipoprotein compare
PGA1_c04520 +0.3 2.9 putative ABC transporter cyclic nucleotide-binding protein compare
PGA1_c19040 +0.3 2.8 multidrug resistance protein MdtC compare
PGA1_c10730 +0.3 0.9 ribose-5-phosphate isomerase B compare
PGA1_c27450 +0.3 1.9 Demethylmenaquinone methyltransferase compare
PGA1_c17750 +0.3 1.9 putative gene transfer agent tail tape measure protein compare
PGA1_c26790 +0.3 2.1 transcriptional regulator, TetR family compare
PGA1_c07920 +0.3 2.0 signal transduction histidine kinase compare
PGA1_c20370 +0.3 0.9 tRNA-Asp compare
PGA1_c19070 +0.3 2.3 LysM domain. compare
PGA1_c32110 +0.3 1.0 hypothetical protein compare
PGA1_c12120 +0.3 1.8 thioesterase domain-containing protein compare
PGA1_c07850 +0.3 1.7 transcriptional regulator, lacI family compare
PGA1_65p00260 +0.3 1.7 putative metallopeptidase compare
PGA1_c09970 +0.3 1.7 tryptophan 2,3-dioxygenase KynA compare
PGA1_c36130 +0.3 1.9 putative serine/threonine phosphatase compare
PGA1_c09290 +0.3 1.3 WGR domain. compare
PGA1_c32930 +0.3 0.7 ribosome-binding factor A compare
PGA1_c24290 +0.3 1.4 hypothetical protein compare
PGA1_c15930 +0.3 1.5 hypothetical protein compare
PGA1_262p00800 +0.3 2.4 phenylacetic acid degradation protein PaaZ compare
PGA1_c14190 +0.3 2.1 putative transcriptional regulator, AraC family compare
PGA1_78p00490 +0.3 0.9 putative HTH-type transcriptional regulator compare
PGA1_c20890 +0.3 1.7 Molybdopterin biosynthesis enzyme compare
PGA1_c21650 +0.3 1.1 Uncharacterized protein conserved in bacteria compare
PGA1_c02440 +0.3 2.6 putative ATP-binding/permease fusion ABC transporter compare
PGA1_c22820 +0.3 1.4 lytic transglycosylase-like protein compare
PGA1_c01090 +0.3 1.6 DNA repair protein RecO compare
PGA1_c07720 +0.3 1.6 universal stress protein compare
PGA1_c02460 +0.3 2.5 hypothetical protein compare
PGA1_65p00270 +0.3 1.3 Hemolysin-type calcium-binding repeat (2 copies). compare
PGA1_c11590 +0.3 1.6 hypothetical protein compare
PGA1_262p00990 +0.3 1.5 transcriptional regulator, LysR family compare
PGA1_c28910 +0.3 1.9 carboxymuconolactone decarboxylase-like protein compare
PGA1_262p00070 +0.3 1.8 Lipid A core - O-antigen ligase and related enzymes compare
PGA1_c10585 +0.3 1.3 hypothetical protein compare
PGA1_c26020 +0.3 2.1 transcriptional regulator, MarR family compare
PGA1_262p01670 +0.3 1.4 putative transcriptional regulator, LysR family compare
PGA1_c34880 +0.3 2.3 putative response regulator compare
PGA1_262p01300 +0.3 1.0 Cupin domain. compare
PGA1_78p00340 +0.3 0.8 Uncharacterized protein, possibly involved in utilization of glycolate and propanediol compare
PGA1_c18050 +0.3 1.3 Uncharacterized conserved protein compare
PGA1_c34890 +0.3 2.1 putative histidine-containing phosphotransfer protein compare
PGA1_c03210 +0.3 1.7 branched-chain amino acid transport protein azlD-like protein compare
PGA1_c04090 +0.3 2.0 beta-ketoadipyl-CoA thiolase PaaJ compare
PGA1_c15420 +0.3 1.2 Yip1 domain. compare
PGA1_c14930 +0.3 2.0 putative MFS transporter compare
PGA1_262p01360 +0.3 1.4 transcriptional regulator, LysR family compare
PGA1_c11070 +0.3 1.4 exodeoxyribonuclease III compare
PGA1_c34290 +0.3 0.9 peptide methionine sulfoxide reductase MsrA compare
PGA1_c23710 +0.3 1.0 putative protein HflK compare
PGA1_65p00160 +0.3 1.1 Bacterial putative lipoprotein (DUF940). compare
PGA1_c03370 +0.3 1.0 hypothetical protein compare
PGA1_c13060 +0.3 0.9 sensor histidine kinase compare
PGA1_c12300 +0.3 1.8 glucans biosynthesis glucosyltransferase H compare
PGA1_c04330 +0.3 1.4 hypothetical protein compare
PGA1_c13960 +0.3 2.1 putative mechanosensitive ion channel protein compare
PGA1_c04060 +0.3 1.6 phenylacetic acid degradation protein PaaC compare
PGA1_c29600 +0.3 1.4 hypothetical protein compare
PGA1_c22370 +0.3 1.4 hypothetical protein compare
PGA1_c24630 +0.3 1.8 transcriptional regulator, MarR family compare
PGA1_262p01730 +0.3 1.3 putative glutathione import ATP-binding protein compare
PGA1_c19030 +0.3 2.0 putative efflux transporter, RND family, MFP subunit compare
PGA1_65p00390 +0.3 1.4 UDP-galactopyranose mutase Glf compare
PGA1_c17400 +0.3 1.2 Uncharacterized protein conserved in bacteria compare
PGA1_262p01165 +0.3 0.9 hypothetical protein compare
PGA1_c13650 +0.3 2.0 hypothetical protein compare
PGA1_c15820 +0.3 1.5 putative phenylacetic acid degradation protein compare
PGA1_c22060 +0.3 1.6 Putative virion core protein (lumpy skin disease virus) compare
PGA1_262p02010 +0.3 0.7 Uncharacterized conserved protein compare
PGA1_c13850 +0.3 1.5 SnoaL-like polyketide cyclase. compare
PGA1_c16110 +0.3 0.7 putative ion channel compare
PGA1_c10770 +0.3 1.6 5'-nucleotidase SurE compare
PGA1_c16410 +0.3 1.5 ribosomal large subunit pseudouridine synthase E compare
PGA1_c33560 +0.3 2.1 putative adenylate and guanylate cyclase compare
PGA1_262p00740 +0.3 1.6 putative peptidase, family M20/M25/M40 compare
PGA1_c11380 +0.3 1.7 endonuclease-like protein compare
PGA1_c12580 +0.3 1.4 Uncharacterized protein conserved in bacteria (DUF2155). compare
PGA1_c11970 +0.3 1.7 Sporulation related domain. compare
PGA1_65p00430 +0.3 1.2 putative glycosyl transferase compare
PGA1_65p00180 +0.3 0.7 putative sugar transferase compare
PGA1_c27850 +0.3 1.7 glycosyltransferase compare
PGA1_c11930 +0.3 1.6 Cytidine deaminase (EC 3.5.4.5) (from data) compare
PGA1_c00790 +0.3 1.4 hypothetical protein compare
PGA1_c07860 +0.2 1.9 alpha-glucosides-binding periplasmic protein AglE compare
PGA1_c22240 +0.2 1.0 hypothetical protein compare
PGA1_c06140 +0.2 1.7 putative bacterial type II/III secretion system protein compare
PGA1_c07740 +0.2 1.3 putative gluconate 5-dehydrogenase compare
PGA1_262p00970 +0.2 2.3 putative beta etherase TdaB compare
PGA1_c12150 +0.2 1.8 dihydroorotate dehydrogenase PyrD compare
PGA1_c12370 +0.2 1.5 YeeE/YedE family (DUF395). compare
PGA1_c09140 +0.2 1.0 dethiobiotin synthetase BioD compare
PGA1_c13200 +0.2 1.4 ABC transporter for D-Sorbitol, permease component 2 (from data) compare
PGA1_c06400 +0.2 0.9 putative antibiotic acetyltransferase compare
PGA1_262p01260 +0.2 0.7 copper-containing nitrite reductase NirK compare
PGA1_c29070 +0.2 0.9 integral membrane protein PecM compare
PGA1_262p00190 +0.2 1.6 putative transporter, MFS family compare
PGA1_c19930 +0.2 1.4 agmatinase SpeB compare
PGA1_c11020 +0.2 1.5 hypothetical protein compare
PGA1_c20000 +0.2 0.6 hypothetical protein compare
PGA1_c00600 +0.2 0.3 putative acetyltransferase compare
PGA1_262p00640 +0.2 1.6 Hemolysin-type calcium-binding repeat (2 copies). compare
PGA1_c27120 +0.2 0.9 hypothetical protein compare
PGA1_c13790 +0.2 1.8 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Phaeobacter inhibens DSM 17395 in stress experiments

For stress MreB Perturbing Compound A22 across organisms