Experiment set7IT048 for Caulobacter crescentus NA1000

PYE_noCalcium 4C survival rep2 58 days

Group: survival
Media: PYE_noCalcium
Culturing: Caulo_ML2, tube, Aerobic, at 4 (C), shaken=25 rpm
By: Sneha on 8-Aug-18
Media components: 2 g/L Bacto Peptone, 1 g/L Yeast Extract, 0.8 mM Magnesium sulfate

Specific Phenotypes

For 6 genes in this experiment

SEED Subsystems

Subsystem	#Specific
Heat shock dnaK gene cluster extended	1
N-heterocyclic aromatic compound degradation	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Purine metabolism
• Lipopolysaccharide biosynthesis
• Thiamine metabolism
• Folate biosynthesis

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
UTP and CTP dephosphorylation I	7	5	2
pyrimidine deoxyribonucleotides de novo biosynthesis IV	7	6	1
pyrimidine deoxyribonucleotides biosynthesis from CTP	8	6	1
pyrimidine deoxyribonucleotides de novo biosynthesis I	9	9	1
pyrimidine deoxyribonucleotides de novo biosynthesis III	9	8	1
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli)	14	12	1
superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis	18	17	1