Experiment set7IT044 for Desulfovibrio vulgaris Miyazaki F

Compare to:

Defined MoLS4

200 most detrimental genes:

  gene name fitness t score description  
DvMF_0556 +2.5 21.8 diguanylate cyclase (RefSeq) compare
DvMF_0028 +2.4 17.7 hypothetical protein (RefSeq) compare
DvMF_1085 +2.3 19.3 flagellar motor protein MotA (RefSeq) compare
DvMF_1084 +2.3 21.4 OmpA/MotB domain protein (RefSeq) compare
DvMF_2770 +2.3 13.7 no description compare
DvMF_1325 +2.0 19.1 TPR repeat-containing protein (RefSeq) compare
DvMF_1674 +2.0 4.3 hypothetical protein (RefSeq) compare
DvMF_2290 +2.0 18.3 flagellar protein export ATPase FliI (RefSeq) compare
DvMF_2289 +2.0 17.9 flagellar assembly protein FliH, putative (RefSeq) compare
DvMF_3191 +1.9 3.9 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq) compare
DvMF_2009 +1.9 6.7 flagellar basal body-associated protein FliL (RefSeq) compare
DvMF_2277 +1.9 2.2 hydrogenase expression/formation protein HypE (RefSeq) compare
DvMF_2518 flgG +1.8 17.0 flagellar basal body rod protein FlgG (RefSeq) compare
DvMF_1324 +1.8 12.1 sigma54 specific transcriptional regulator, Fis family (RefSeq) compare
DvMF_2519 +1.8 14.2 flagella basal body P-ring formation protein FlgA (RefSeq) compare
DvMF_1808 +1.8 15.9 protein of unknown function DUF1078 domain protein (RefSeq) compare
DvMF_0557 +1.7 13.9 flagellar synthesis regulator FleN, putative (RefSeq) compare
DvMF_2517 +1.7 15.9 protein of unknown function DUF1078 domain protein (RefSeq) compare
DvMF_1552 +1.7 2.3 hypothetical protein (RefSeq) compare
DvMF_0965 +1.7 5.3 pyruvate kinase (RefSeq) compare
DvMF_2521 flgI +1.7 16.2 flagellar basal body P-ring protein (RefSeq) compare
DvMF_1393 +1.7 7.9 flagellar export protein FliJ (RefSeq) compare
DvMF_2285 +1.7 9.8 flagellar basal-body rod protein FlgC (RefSeq) compare
DvMF_2520 flgH +1.7 14.4 flagellar basal body L-ring protein (RefSeq) compare
DvMF_0217 +1.6 8.9 Hpt protein (RefSeq) compare
DvMF_2284 flgB +1.6 14.0 flagellar basal body rod protein FlgB (RefSeq) compare
DvMF_0247 +1.6 4.7 flagellar hook capping protein (RefSeq) compare
DvMF_0246 +1.6 6.9 protein of unknown function DUF1078 domain protein (RefSeq) compare
DvMF_2287 +1.6 12.2 flagellar M-ring protein FliF (RefSeq) compare
DvMF_2286 +1.5 9.5 flagellar hook-basal body complex subunit FliE (RefSeq) compare
DvMF_0248 +1.5 9.1 flagellar hook-length control protein (RefSeq) compare
DvMF_2215 fliP +1.4 13.5 flagellar biosynthesis protein FliP (RefSeq) compare
DvMF_2016 +1.4 13.8 flagellar biosynthetic protein FliR (RefSeq) compare
DvMF_2288 +1.4 10.0 flagellar motor switch protein FliG (RefSeq) compare
DvMF_2014 flhA +1.4 11.5 flagellar biosynthesis protein FlhA (RefSeq) compare
DvMF_0702 +1.4 1.9 hypothetical protein (RefSeq) compare
DvMF_2314 +1.3 1.7 aminotransferase class IV (RefSeq) compare
DvMF_2216 +1.3 8.2 flagellar biosynthetic protein FliQ (RefSeq) compare
DvMF_1394 +1.3 10.7 hypothetical protein (RefSeq) compare
DvMF_2249 +1.3 9.0 signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq) compare
DvMF_1159 +1.3 12.1 type I secretion membrane fusion protein, HlyD family (RefSeq) compare
DvMF_1160 +1.2 11.0 cyclic nucleotide-binding protein (RefSeq) compare
DvMF_0736 +1.2 1.3 hypothetical protein (RefSeq) compare
DvMF_0205 +1.2 1.4 hypothetical protein (RefSeq) compare
DvMF_0206 +1.2 5.1 hypothetical protein (RefSeq) compare
DvMF_2015 flhB +1.2 9.7 flagellar biosynthesis protein FlhB (RefSeq) compare
DvMF_1396 +1.2 9.6 flagellar motor switch protein FliM (RefSeq) compare
DvMF_3045 +1.2 2.2 hypothetical protein (RefSeq) compare
DvMF_1157 +1.2 7.4 putative PAS/PAC sensor protein (RefSeq) compare
DvMF_0506 +1.2 1.9 PGAP1 family protein (RefSeq) compare
DvMF_0763 +1.1 7.2 diphosphate--fructose-6-phosphate 1-phosphotransferase (RefSeq) compare
DvMF_2119 +1.1 0.9 hypothetical protein (RefSeq) compare
DvMF_2213 +1.1 6.1 flagellar motor switch protein FliN (RefSeq) compare
DvMF_1558 +1.1 1.6 transcriptional regulator, MarR family (RefSeq) compare
DvMF_1463 +1.1 1.4 response regulator receiver protein (RefSeq) compare
DvMF_1572 +1.1 1.2 flavin reductase domain protein FMN-binding (RefSeq) compare
DvMF_0776 +1.0 1.6 CheW protein (RefSeq) compare
DvMF_1772 +1.0 6.6 response regulator receiver protein (RefSeq) compare
DvMF_3201 +1.0 2.0 hypothetical protein (RefSeq) compare
DvMF_3020 +1.0 9.7 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) compare
DvMF_2346 +1.0 1.1 response regulator receiver protein (RefSeq) compare
DvMF_1494 +1.0 8.7 type I secretion outer membrane protein, TolC family (RefSeq) compare
DvMF_2842 +1.0 7.5 hypothetical protein (RefSeq) compare
DvMF_2753 +1.0 1.4 ABC transporter related (RefSeq) compare
DvMF_2226 +0.9 1.6 type IV pilus assembly PilZ (RefSeq) compare
DvMF_1766 +0.9 8.2 sigma54 specific transcriptional regulator with PAS/PAC sensor, Fis family (RefSeq) compare
DvMF_0794 +0.9 2.8 transcriptional regulator, XRE family (RefSeq) compare
DvMF_0472 +0.9 5.7 hypothetical protein (RefSeq) compare
DvMF_0025 +0.9 1.4 protein of unknown function DUF1121 (RefSeq) compare
DvMF_0054 +0.9 1.5 hypothetical protein (RefSeq) compare
DvMF_2214 +0.9 4.9 flagellar biosynthesis protein FliO (RefSeq) compare
DvMF_0720 +0.9 1.2 protein of unknown function DUF1018 (RefSeq) compare
DvMF_0769 +0.8 1.5 metal dependent phosphohydrolase (RefSeq) compare
DvMF_0249 +0.8 6.3 glycosyl transferase family 9 (RefSeq) compare
DvMF_0460 +0.8 5.0 adenylate cyclase (RefSeq) compare
DvMF_1279 +0.8 1.7 hypothetical protein (RefSeq) compare
DvMF_2172 +0.8 4.2 DSBA oxidoreductase (RefSeq) compare
DvMF_1574 +0.8 1.6 glycosyl transferase family 9 (RefSeq) compare
DvMF_0117 +0.8 1.6 ABC-3 protein (RefSeq) compare
DvMF_1349 +0.8 1.3 alanine racemase (RefSeq) compare
DvMF_2717 +0.8 1.9 GTP-binding protein LepA (RefSeq) compare
DvMF_1844 +0.8 1.1 acylneuraminate cytidylyltransferase (RefSeq) compare
DvMF_3018 +0.8 3.5 O-antigen polymerase (RefSeq) compare
DvMF_0018 +0.8 1.1 adenylylsulfate kinase (RefSeq) compare
DvMF_1658 +0.8 1.7 Terminase (RefSeq) compare
DvMF_1521 +0.8 3.7 hypothetical protein (RefSeq) compare
DvMF_2100 +0.8 1.0 hypothetical protein (RefSeq) compare
DvMF_0966 +0.8 5.3 metal dependent phosphohydrolase (RefSeq) compare
DvMF_1183 +0.8 1.4 hypothetical protein (RefSeq) compare
DvMF_0295 +0.7 1.1 hypothetical protein (RefSeq) compare
DvMF_2952 +0.7 1.5 metal dependent phosphohydrolase (RefSeq) compare
DvMF_1022 +0.7 2.5 hypothetical protein (RefSeq) compare
DvMF_0905 +0.7 1.2 hypothetical protein (RefSeq) compare
DvMF_0781 +0.7 1.7 NLP/P60 protein (RefSeq) compare
DvMF_0252 +0.7 3.4 anti-sigma-factor antagonist (RefSeq) compare
DvMF_2948 +0.7 1.2 transcriptional regulator, AraC family (RefSeq) compare
DvMF_0968 +0.7 4.9 hypothetical protein (RefSeq) compare
DvMF_2844 +0.7 6.1 histidine kinase (RefSeq) compare
DvMF_2458 +0.7 1.3 fumarate reductase respiratory complex transmembrane subunit (RefSeq) compare
DvMF_0171 +0.7 4.0 beta-lactamase domain protein (RefSeq) compare
DvMF_1136 +0.7 4.1 Tetratricopeptide domain protein (RefSeq) compare
DvMF_1767 +0.7 3.6 hypothetical protein (RefSeq) compare
DvMF_2115 +0.7 1.0 hypothetical protein (RefSeq) compare
DvMF_0775 +0.7 4.2 response regulator receiver protein (RefSeq) compare
DvMF_0406 +0.7 4.6 Tetratricopeptide TPR_4 (RefSeq) compare
DvMF_2137 +0.7 1.6 TRAP dicarboxylate transporter, DctM subunit (RefSeq) compare
DvMF_1935 +0.7 1.4 hypothetical protein (RefSeq) compare
DvMF_2373 +0.7 6.3 multi-sensor hybrid histidine kinase (RefSeq) compare
DvMF_0553 +0.7 1.2 CBS domain containing protein (RefSeq) compare
DvMF_0939 +0.7 2.8 hypothetical protein (RefSeq) compare
DvMF_2204 +0.7 4.2 aminotransferase class I and II (RefSeq) compare
DvMF_1769 +0.7 0.8 response regulator receiver protein (RefSeq) compare
DvMF_0473 +0.6 1.2 hypoxanthine phosphoribosyltransferase (RefSeq) compare
DvMF_2843 +0.6 4.8 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) compare
DvMF_2523 +0.6 4.2 FlgN family protein (RefSeq) compare
DvMF_3011 +0.6 0.9 metal dependent phosphohydrolase (RefSeq) compare
DvMF_0613 +0.6 0.9 nicotinate (nicotinamide) nucleotide adenylyltransferase (RefSeq) compare
DvMF_1021 +0.6 2.7 two component transcriptional regulator, LuxR family (RefSeq) compare
DvMF_1800 +0.6 1.2 phage shock protein B (RefSeq) compare
DvMF_2220 +0.6 0.9 lipolytic protein G-D-S-L family (RefSeq) compare
DvMF_0724 +0.6 1.0 hypothetical protein (RefSeq) compare
DvMF_0780 +0.6 2.6 response regulator receiver modulated CheB methylesterase (RefSeq) compare
DvMF_0399 +0.6 1.2 multiple antibiotic resistance (MarC)-related protein (RefSeq) compare
DvMF_3017 +0.6 3.0 glycosyl transferase group 1 (RefSeq) compare
DvMF_0378 +0.6 1.1 undecaprenol kinase (RefSeq) compare
DvMF_2324 +0.6 3.7 PAS/PAC sensor hybrid histidine kinase (RefSeq) compare
DvMF_0947 +0.6 1.0 thioesterase superfamily protein (RefSeq) compare
DvMF_2301 +0.6 2.5 molybdenum cofactor biosynthesis protein C (RefSeq) compare
DvMF_1278 +0.6 2.8 hypothetical protein (RefSeq) compare
DvMF_1518 +0.6 2.8 NADH dehydrogenase (quinone) (RefSeq) compare
DvMF_1495 +0.6 5.3 von Willebrand factor type A (RefSeq) compare
DvMF_0336 +0.6 2.0 transcriptional regulator, TetR family (RefSeq) compare
DvMF_2325 +0.6 1.5 ectoine/hydroxyectoine ABC transporter solute-binding protein (RefSeq) compare
DvMF_2863 +0.6 1.8 AsmA family protein (RefSeq) compare
DvMF_2361 +0.6 1.3 TonB family protein (RefSeq) compare
DvMF_1086 +0.6 1.1 hypothetical protein (RefSeq) compare
DvMF_1312 +0.6 5.0 NAD-dependent epimerase/dehydratase (RefSeq) compare
DvMF_0431 +0.6 0.8 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family (RefSeq) compare
DvMF_2969 +0.6 1.3 ABC transporter related (RefSeq) compare
DvMF_0040 +0.6 2.5 Mammalian cell entry related domain protein (RefSeq) compare
DvMF_2524 +0.6 4.1 flagellar hook-associated protein FlgK (RefSeq) compare
DvMF_2455 +0.6 2.4 hemerythrin-like metal-binding protein (RefSeq) compare
DvMF_0304 +0.6 1.7 putative cache sensor protein (RefSeq) compare
DvMF_0768 +0.5 1.1 response regulator receiver modulated diguanylate cyclase (RefSeq) compare
DvMF_1825 +0.5 3.4 oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) compare
DvMF_1547 +0.5 3.0 glycosyl transferase family 9 (RefSeq) compare
DvMF_3014 +0.5 0.9 hypothetical protein (RefSeq) compare
DvMF_1366 +0.5 4.0 diguanylate cyclase (RefSeq) compare
DvMF_0072 +0.5 3.5 hypothetical protein (RefSeq) compare
DvMF_0451 +0.5 0.5 DNA ligase, NAD-dependent (RefSeq) compare
DvMF_0595 +0.5 1.2 phosphonate ABC transporter, inner membrane subunit (RefSeq) compare
DvMF_0357 +0.5 4.0 histidine triad (HIT) protein (RefSeq) compare
DvMF_1979 +0.5 1.2 hypothetical protein (RefSeq) compare
DvMF_2706 +0.5 2.1 glycosyl transferase group 1 (RefSeq) compare
DvMF_2397 +0.5 0.9 hypothetical protein (RefSeq) compare
DvMF_2811 +0.5 2.3 pyridoxamine kinase (RefSeq) compare
DvMF_2696 +0.5 2.5 glycosyl transferase family 2 (RefSeq) compare
DvMF_0372 +0.5 1.0 translation elongation factor P (RefSeq) compare
DvMF_2755 +0.5 1.3 response regulator receiver protein (RefSeq) compare
DvMF_1075 +0.5 0.8 hypothetical protein (RefSeq) compare
DvMF_2145 +0.5 0.5 Protein of unknown function DUF1778 (RefSeq) compare
DvMF_2522 +0.5 2.3 Peptidase M23 (RefSeq) compare
DvMF_1024 +0.5 3.5 hypothetical protein (RefSeq) compare
DvMF_3072 +0.5 3.8 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) compare
DvMF_2489 +0.5 2.2 diguanylate cyclase (RefSeq) compare
DvMF_2698 +0.5 2.2 methyltransferase FkbM family (RefSeq) compare
DvMF_0342 +0.5 2.7 hypothetical protein (RefSeq) compare
DvMF_2929 +0.5 0.8 hydroxypyruvate isomerase (RefSeq) compare
DvMF_0459 +0.5 1.5 ATP-dependent Clp protease adaptor protein ClpS (RefSeq) compare
DvMF_2645 +0.5 2.9 peptidase U32 (RefSeq) compare
DvMF_1295 +0.5 0.5 hypothetical protein (RefSeq) compare
DvMF_2950 +0.5 2.7 flagellin domain protein (RefSeq) compare
DvMF_1519 +0.5 4.3 respiratory-chain NADH dehydrogenase subunit 1 (RefSeq) compare
DvMF_1914 +0.5 2.0 protein of unknown function DUF939 (RefSeq) compare
DvMF_0447 +0.5 1.2 amino acid-binding ACT domain protein (RefSeq) compare
DvMF_1038 +0.5 3.7 twitching motility protein (RefSeq) compare
DvMF_0183 +0.5 1.5 Ferroxidase (RefSeq) compare
DvMF_0324 +0.5 1.5 4Fe-4S ferredoxin iron-sulfur binding domain protein (RefSeq) compare
DvMF_0032 +0.5 3.8 diguanylate cyclase (RefSeq) compare
DvMF_0322 +0.5 0.7 heterodisulfide reductase, C subunit (RefSeq) compare
DvMF_2640 +0.5 4.3 PAS/PAC sensor signal transduction histidine kinase (RefSeq) compare
DvMF_0203 +0.5 1.9 Radical SAM domain protein (RefSeq) compare
DvMF_2332 +0.5 2.9 response regulator receiver protein (RefSeq) compare
DvMF_1203 +0.5 1.4 protein of unknown function DUF81 (RefSeq) compare
DvMF_0332 +0.5 1.7 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) compare
DvMF_0993 +0.5 1.0 transcriptional regulator, Crp/Fnr family (RefSeq) compare
DvMF_0902 +0.5 1.1 hypothetical protein (RefSeq) compare
DvMF_1649 +0.5 1.3 hypothetical protein (RefSeq) compare
DvMF_2527 +0.5 3.2 flagellar assembly protein FliW (RefSeq) compare
DvMF_1033 +0.5 1.7 hypothetical protein (RefSeq) compare
DvMF_0030 +0.5 1.4 hypothetical protein (RefSeq) compare
DvMF_0619 +0.5 3.8 CheA signal transduction histidine kinase (RefSeq) compare
DvMF_0326 +0.5 2.3 hydrogenase, putative (RefSeq) compare
DvMF_1544 +0.4 3.2 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) compare
DvMF_0748 +0.4 0.6 hypothetical protein (RefSeq) compare
DvMF_1328 +0.4 1.3 heavy metal-binding domain-containing protein (RefSeq) compare
DvMF_1652 +0.4 1.6 phage head-tail adaptor (RefSeq) compare
DvMF_2113 +0.4 1.1 hypothetical protein (RefSeq) compare
DvMF_1827 +0.4 2.7 binding-protein-dependent transport systems inner membrane component (RefSeq) compare
DvMF_1375 +0.4 3.3 histidine kinase (RefSeq) compare


Specific Phenotypes

None in this experiment

For Desulfovibrio vulgaris Miyazaki F in carbon source experiments