Experiment set7IT043 for Synechococcus elongatus PCC 7942
BG11 with Sodium nitrite 20 mM
Group: stressMedia: BG11 + Sodium nitrite (20 mM)
Culturing: SynE_ML6, 12 well microplate, Aerobic, at 30 (C), shaken=0 rpm
By: Mark on 10/2/2015
Media components: 1.5 g/L Sodium nitrate, 0.04 g/L Potassium phosphate dibasic, 0.075 g/L Magnesium Sulfate Heptahydrate, 0.036 g/L Calcium chloride dihydrate, 0.006 g/L Citric Acid, 0.006 g/L Ferric ammonium citrate, 0.001 g/L EDTA (disodium salt), 0.02 g/L Sodium carbonate, Trace metal mix A5 (0.00286 g/L Boric Acid, 0.00181 g/L Manganese (II) chloride tetrahydrate, 0.000222 g/L Zinc sulfate heptahydrate, 0.00039 g/L Sodium Molybdate Dihydrate, 7.9e-05 g/L Copper (II) sulfate pentahydrate, 0.0494 mg/L Cobalt(II) nitrate hexahydrate)
Specific Phenotypes
For 3 genes in this experiment
For stress Sodium nitrite in Synechococcus elongatus PCC 7942
For stress Sodium nitrite across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Synechocystis experimental | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| plastoquinol-9 biosynthesis I | 3 | 1 | 1 |
| plastoquinol-9 biosynthesis II | 5 | 3 | 1 |
| superpathway of plastoquinol biosynthesis | 5 | 3 | 1 |
| vitamin E biosynthesis (tocopherols) | 7 | 1 | 1 |