Experiment set7IT035 for Herbaspirillum seropedicae SmR1

Compare to:

L-Malic acid carbon source and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days

Genes with specific phenotypes:

  gene name fitness t score description  
HSERO_RS14230 -4.5 -13.6 protein fixC conserved
HSERO_RS14225 -4.5 -8.5 protein fixB conserved
HSERO_RS14220 -4.4 -11.6 protein fixA compare
HSERO_RS14285 -4.3 -10.4 nitrogenase iron-molybdenum cofactor biosynthesis protein NifE conserved
HSERO_RS14295 -4.2 -11.0 nitrogenase molybdenum-iron protein alpha chain conserved
HSERO_RS14385 -4.1 -10.8 FeMo cofactor biosynthesis protein NifB conserved
HSERO_RS14300 -4.1 -7.4 nitrogenase iron protein conserved
HSERO_RS14290 -4.1 -12.4 nitrogenase molybdenum-iron protein beta chain conserved
HSERO_RS14280 -4.0 -10.0 nitrogenase molybdenum-cofactor synthesis protein NifN protein compare
HSERO_RS14390 -3.6 -17.0 ATPase AAA compare
HSERO_RS15790 -3.6 -11.0 chemotaxis protein compare
HSERO_RS14215 -3.5 -8.7 nitrogen fixation protein NifW conserved
HSERO_RS14210 -3.5 -7.4 homocitrate synthase compare
HSERO_RS14190 -2.8 -5.5 iron--sulfur cluster insertion protein ErpA compare
HSERO_RS00425 -2.7 -11.8 ammonia channel protein compare
HSERO_RS00415 -2.4 -8.3 hypothetical protein compare
HSERO_RS10545 -2.2 -12.7 protein disaggregation chaperone compare
HSERO_RS01920 -2.0 -5.5 50S ribosomal protein L11 methyltransferase compare
HSERO_RS11405 -1.7 -9.5 transcriptional regulator compare
HSERO_RS21210 -1.7 -11.1 membrane protein compare
HSERO_RS21195 -1.6 -8.8 hypothetical protein compare
HSERO_RS02615 -1.6 -8.9 polymerase compare
HSERO_RS21220 -1.6 -11.9 hypothetical protein compare
HSERO_RS10615 -1.5 -6.7 transcription elongation factor GreB compare
HSERO_RS14335 -1.4 -6.7 aminotransferase DegT conserved
HSERO_RS04295 -1.4 -7.2 diguanylate cyclase compare
HSERO_RS14180 -1.2 -5.5 cysteine desulfurase compare
HSERO_RS21980 -1.0 -6.7 membrane protein compare
HSERO_RS04290 +1.5 7.6 DNA-binding protein compare


Specific phenotypes for nitrogen fixation L-Malic acid across organisms