Experiment set7IT033 for Methanococcus maripaludis S2

Compare to:

control, 1x iron with casamino acids and vitamins, H2 media

200 most important genes:

  gene name fitness t score description  
MMP_RS06355 -5.3 -4.8 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS05515 -5.0 -10.8 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS01175 -4.8 -7.5 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS03600 -4.5 -3.6 triose-phosphate isomerase compare
MMP_RS01500 -4.3 -4.2 CBS domain-containing protein compare
MMP_RS07635 -4.2 -14.4 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS03015 -4.1 -14.8 GTP 3' 8-cyclase MoaA compare
MMP_RS07005 -4.0 -0.9 4Fe-4S binding protein compare
MMP_RS06350 -4.0 -10.1 HesA/MoeB/ThiF family protein compare
MMP_RS02010 -3.8 -11.5 PHP domain-containing protein compare
MMP_RS08210 -3.7 -3.2 phosphatidylglycerophosphatase A compare
MMP_RS01020 -3.7 -1.7 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS07845 -3.7 -3.5 LL-diaminopimelate aminotransferase compare
MMP_RS07755 -3.7 -1.7 DUF555 domain-containing protein compare
MMP_RS08720 -3.6 -3.2 4Fe-4S binding protein compare
MMP_RS01795 -3.6 -2.7 methanogenesis marker 6 protein compare
MMP_RS04685 -3.5 -4.3 DUF126 domain-containing protein compare
MMP_RS03435 -3.5 -2.5 ketol-acid reductoisomerase compare
MMP_RS02240 -3.4 -5.8 methanogenesis marker 7 protein compare
MMP_RS06295 -3.4 -10.9 methanogenesis marker 14 protein compare
MMP_RS03315 -3.3 -2.6 ferrous iron transport protein A compare
MMP_RS01755 -3.3 -2.3 DUF2097 domain-containing protein compare
MMP_RS01385 -3.2 -1.0 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS08715 -3.2 -3.2 formylmethanofuran dehydrogenase subunit B compare
MMP_RS06285 -3.2 -3.8 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS08635 -3.1 -3.3 UbiA family prenyltransferase compare
MMP_RS01545 -3.1 -1.7 CBS domain-containing protein compare
MMP_RS03025 -3.1 -9.6 molybdenum cofactor guanylyltransferase compare
MMP_RS06120 -3.1 -3.7 UPF0147 family protein compare
MMP_RS00040 -3.0 -5.3 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS04605 -3.0 -7.9 cobalt ECF transporter T component CbiQ compare
MMP_RS01225 -3.0 -6.2 DUF5379 domain-containing protein compare
MMP_RS05845 -3.0 -3.0 tRNA-intron lyase compare
MMP_RS04500 -3.0 -19.9 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS07380 -2.9 -3.3 transcription elongation factor Spt5 compare
MMP_RS06400 -2.9 -2.7 4Fe-4S binding protein compare
MMP_RS01005 -2.9 -2.1 riboflavin synthase compare
MMP_RS01610 -2.9 -4.8 hypothetical protein compare
MMP_RS04775 -2.9 -5.5 adenosylhomocysteinase compare
MMP_RS02195 -2.9 -5.2 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS01960 -2.9 -1.6 hypothetical protein compare
MMP_RS00520 -2.8 -2.8 RNA polymerase Rpb4 family protein compare
MMP_RS06730 -2.8 -2.2 phosphopantothenate/pantothenate synthetase compare
MMP_RS07600 -2.8 -3.1 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS06895 -2.8 -3.2 selenocysteine-specific translation elongation factor compare
MMP_RS08435 -2.8 -3.8 Era-like GTP-binding protein compare
MMP_RS02355 -2.8 -5.4 30S ribosomal protein S27ae compare
MMP_RS07390 -2.8 -3.9 cell division protein FtsZ compare
MMP_RS01220 -2.8 -9.9 hypothetical protein compare
MMP_RS08095 -2.8 -9.9 dethiobiotin synthase compare
MMP_RS09020 -2.7 -2.5 hypothetical protein compare
MMP_RS04780 -2.7 -5.2 ribonuclease P compare
MMP_RS01800 -2.7 -5.3 TIGR00303 family protein compare
MMP_RS08650 -2.7 -4.3 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS02245 -2.7 -5.8 hypothetical protein compare
MMP_RS04710 -2.7 -2.8 hypothetical protein compare
MMP_RS06370 -2.7 -6.5 biotin synthase BioB compare
MMP_RS00300 -2.7 -1.0 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS02800 -2.6 -7.5 nucleotidyltransferase domain-containing protein compare
MMP_RS01265 -2.6 -2.1 hypothetical protein compare
MMP_RS06270 -2.6 -7.9 TIGR00300 family protein compare
MMP_RS03400 -2.6 -4.7 archease compare
MMP_RS01725 -2.6 -6.4 class I SAM-dependent methyltransferase family protein compare
MMP_RS00110 -2.5 -4.3 hypothetical protein compare
MMP_RS05425 -2.5 -5.6 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS05920 -2.5 -0.6 50S ribosomal protein L37e compare
MMP_RS06475 -2.5 -6.7 FAD-dependent oxidoreductase compare
MMP_RS00695 -2.5 -1.3 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS07545 -2.5 -1.6 HTH domain-containing protein compare
MMP_RS08300 -2.5 -1.5 metal-sulfur cluster assembly factor compare
MMP_RS00685 -2.5 -4.6 2-phospho-L-lactate guanylyltransferase compare
MMP_RS02145 -2.5 -10.3 winged helix-turn-helix transcriptional regulator compare
MMP_RS08745 -2.4 -8.5 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS07735 -2.3 -1.4 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS04615 -2.3 -4.8 PDGLE domain-containing protein compare
MMP_RS03700 -2.3 -9.5 sodium:proton antiporter compare
MMP_RS06885 -2.3 -3.0 50S ribosome-binding GTPase compare
MMP_RS00515 -2.3 -1.2 DUF655 domain-containing protein compare
MMP_RS02345 -2.3 -4.4 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS03035 -2.3 -4.2 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS07955 -2.3 -7.2 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS08100 -2.3 -8.0 8-amino-7-oxononanoate synthase compare
MMP_RS08790 -2.2 -3.0 translation initiation factor IF-2 subunit alpha compare
MMP_RS07200 -2.1 -7.1 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS00810 -2.1 -7.6 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS06020 -2.1 -5.9 archaeoflavoprotein AfpA compare
MMP_RS02875 -2.1 -10.5 chorismate pyruvate-lyase family protein compare
MMP_RS04620 -2.1 -9.6 cobalt transporter CbiM compare
MMP_RS07645 -2.0 -7.1 aldehyde dehydrogenase family protein compare
MMP_RS06625 -2.0 -2.3 DNA primase compare
MMP_RS08105 -2.0 -8.9 6-carboxyhexanoate--CoA ligase compare
MMP_RS06975 -2.0 -2.5 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS00915 -2.0 -7.4 DUF116 domain-containing protein compare
MMP_RS03445 -2.0 -1.4 methanogenesis marker 17 protein compare
MMP_RS06230 -2.0 -3.2 helix-turn-helix domain-containing protein compare
MMP_RS08820 -2.0 -6.8 hypothetical protein compare
MMP_RS03580 -1.9 -3.3 signal recognition particle-docking protein FtsY compare
MMP_RS03960 -1.9 -1.5 hypothetical protein compare
MMP_RS01890 -1.9 -7.7 nucleotide sugar dehydrogenase compare
MMP_RS05555 -1.9 -2.3 DUF4040 domain-containing protein compare
MMP_RS01830 -1.9 -2.0 tRNA-Val compare
MMP_RS05540 -1.9 -3.4 hypothetical protein compare
MMP_RS03640 -1.9 -4.0 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS04890 -1.9 -1.3 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS08330 -1.9 -7.9 NADH-quinone oxidoreductase subunit H compare
MMP_RS01840 -1.9 -8.0 TIGR00289 family protein compare
MMP_RS05930 -1.8 -3.1 3-isopropylmalate dehydratase large subunit compare
MMP_RS00985 -1.8 -7.4 CDC48 family AAA ATPase compare
MMP_RS00750 -1.8 -2.6 fumarate hydratase compare
MMP_RS01880 -1.8 -7.2 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS00895 -1.8 -3.6 hypothetical protein compare
MMP_RS07540 -1.8 -6.1 CBS domain-containing protein compare
MMP_RS01885 -1.8 -8.3 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS06670 -1.8 -5.6 glucose-6-phosphate isomerase compare
MMP_RS07750 -1.7 -6.2 DUF357 domain-containing protein compare
MMP_RS04585 -1.7 -10.1 AIR synthase related protein compare
MMP_RS07420 -1.7 -5.0 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS07195 -1.7 -8.0 M20 family metallo-hydrolase compare
MMP_RS06980 -1.7 -7.5 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS02135 -1.7 -5.7 DUF5612 domain-containing protein compare
MMP_RS06105 -1.7 -9.9 hydrogenase maturation peptidase HycI compare
MMP_RS06900 -1.7 -3.9 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS06840 -1.7 -1.3 DNA-directed RNA polymerase subunit N compare
MMP_RS03145 -1.7 -6.4 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS07710 -1.7 -7.7 cell division protein FtsZ compare
MMP_RS02930 -1.6 -4.5 class I SAM-dependent methyltransferase compare
MMP_RS03475 -1.6 -1.0 hypothetical protein compare
MMP_RS04870 -1.6 -4.3 TIGR02253 family HAD-type hydrolase compare
MMP_RS06340 -1.6 -7.9 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS01380 -1.6 -4.5 PHP domain-containing protein compare
MMP_RS07525 -1.6 -6.4 4Fe-4S binding protein compare
MMP_RS07630 -1.6 -2.0 ATP-binding cassette domain-containing protein compare
MMP_RS02340 -1.6 -2.5 DNA-directed RNA polymerase subunit E'' compare
MMP_RS01365 -1.6 -3.2 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS07090 -1.5 -8.2 tRNA (adenine-N1)-methyltransferase compare
MMP_RS02280 -1.5 -1.1 DUF211 domain-containing protein compare
MMP_RS05265 -1.5 -3.1 2-isopropylmalate synthase compare
MMP_RS01325 -1.5 -1.9 dihydroneopterin aldolase family protein compare
MMP_RS05550 -1.5 -0.9 cation:proton antiporter compare
MMP_RS01875 -1.5 -7.8 N-acetyltransferase compare
MMP_RS03155 -1.5 -7.2 precorrin-6A reductase compare
MMP_RS08350 -1.5 -1.1 hypothetical protein compare
MMP_RS05345 -1.5 -5.9 hypothetical protein compare
MMP_RS03140 -1.5 -9.4 hypothetical protein compare
MMP_RS00115 -1.5 -9.8 radical SAM protein compare
MMP_RS03095 -1.5 -5.4 diphthine synthase compare
MMP_RS04875 -1.5 -6.3 energy-converting hydrogenase B subunit P compare
MMP_RS08460 -1.5 -2.4 proteasome-activating nucleotidase compare
MMP_RS05245 -1.5 -8.7 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS08440 -1.5 -2.5 cell division protein SepF compare
MMP_RS08785 -1.4 -1.1 RNA-protein complex protein Nop10 compare
MMP_RS07075 -1.4 -3.7 phosphomannomutase/phosphoglucomutase compare
MMP_RS07605 -1.4 -3.5 diadenylate cyclase compare
MMP_RS00130 -1.4 -1.5 nickel-responsive transcriptional regulator NikR compare
MMP_RS04900 -1.4 -11.6 hypothetical protein compare
MMP_RS06940 -1.4 -3.2 polyprenyl diphosphate synthase compare
MMP_RS03250 -1.4 -3.1 MJ1244 family protein compare
MMP_RS05925 -1.4 -3.1 small nuclear ribonucleoprotein compare
MMP_RS00050 -1.4 -6.2 AarF/UbiB family protein compare
MMP_RS00900 -1.4 -2.3 50S ribosomal protein L39e compare
MMP_RS01975 -1.3 -10.8 hypothetical protein compare
MMP_RS06925 -1.3 -2.8 ribonuclease VapC4 compare
MMP_RS07435 -1.3 -2.2 GMP synthase subunit A compare
MMP_RS07705 -1.3 -6.8 transcriptional regulator compare
MMP_RS05815 -1.3 -1.9 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS07730 -1.3 -1.6 pyruvate synthase subunit beta compare
MMP_RS06315 -1.3 -0.9 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS07580 -1.3 -2.7 DUF356 domain-containing protein compare
MMP_RS02900 -1.3 -0.6 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS05525 -1.3 -5.8 calcium/sodium antiporter compare
MMP_RS00060 -1.3 -1.7 3-dehydroquinate synthase II compare
MMP_RS08320 -1.3 -5.3 molybdopterin molybdotransferase MoeA compare
MMP_RS01665 -1.3 -2.6 DUF2111 domain-containing protein compare
MMP_RS00735 -1.3 -3.8 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS04090 -1.2 -2.8 hypothetical protein compare
MMP_RS00720 -1.2 -6.2 metal-dependent hydrolase compare
MMP_RS05850 -1.2 -3.6 Ldh family oxidoreductase compare
MMP_RS01045 -1.2 -7.4 diphthamide biosynthesis enzyme Dph2 compare
MMP_RS05440 -1.2 -6.5 winged helix-turn-helix transcriptional regulator compare
MMP_RS06215 -1.2 -1.6 30S ribosomal protein S6e compare
MMP_RS00730 -1.2 -4.4 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS04955 -1.1 -4.9 DNA topoisomerase I compare
MMP_RS01030 -1.1 -3.1 MTAP family purine nucleoside phosphorylase compare
MMP_RS06725 -1.1 -7.1 hypothetical protein compare
MMP_RS07695 -1.1 -3.7 DUF3236 domain-containing protein compare
MMP_RS06130 -1.1 -3.0 peptidylprolyl isomerase compare
MMP_RS07355 -1.1 -0.9 transcription factor S compare
MMP_RS06865 -1.1 -1.2 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS02885 -1.1 -7.3 molybdopterin biosynthesis protein compare
MMP_RS04720 -1.1 -1.7 DedA family protein compare
MMP_RS04690 -1.1 -2.4 class III signal peptide-containing protein compare
MMP_RS00325 -1.1 -1.6 RNA-binding protein compare
MMP_RS01180 -1.1 -1.6 XTP/dITP diphosphatase compare
MMP_RS05950 -1.1 -6.2 nickel-dependent hydrogenase large subunit compare
MMP_RS03485 -1.1 -3.0 TIGR00267 family protein compare
MMP_RS08195 -1.1 -5.7 hypothetical protein compare
MMP_RS05635 -1.1 -5.2 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS08340 -1.1 -3.4 4Fe-4S binding protein compare
MMP_RS08360 -1.0 -3.4 hypothetical protein compare
MMP_RS03110 -1.0 -2.9 glycosyltransferase family 2 protein compare


Specific Phenotypes

For 1 genes in this experiment

For iron Iron (II) chloride tetrahydrate in Methanococcus maripaludis S2

For iron Iron (II) chloride tetrahydrate across organisms