Experiment set7IT033 for Caulobacter crescentus NA1000

Compare to:

PYE 30C survival rep2 28 days

200 most detrimental genes:

  gene name fitness t score description  
CCNA_02910 +4.8 34.4 TonB-dependent receptor compare
CCNA_01393 +4.6 36.8 soluble lytic murein transglycosylase compare
CCNA_00472 +3.8 21.8 GDP-mannose 4,6 dehydratase compare
CCNA_02467 +3.7 19.4 polyisoprenylphosphate hexose-1-phosphotransferase pssZ compare
CCNA_03998 +3.6 23.5 GT1/WbuB-like N-acetyl-L-fucosamine transferase compare
CCNA_00161 +2.9 12.1 hypothetical protein compare
CCNA_00471 +2.9 17.2 GDP-L-fucose synthase compare
CCNA_01427 +2.8 4.8 beta-barrel assembly machine (BAM) protein BamE compare
CCNA_00164 +2.8 14.9 O-antigen polymerase compare
CCNA_00168 +2.6 17.2 polysaccharide export protein compare
CCNA_00163 +2.6 16.3 exopolysaccharide transport family protein compare
CCNA_01252 +2.6 21.3 soluble lytic murein transglycosylase compare
CCNA_00162 +2.5 11.2 hypothetical protein compare
CCNA_00280 +2.4 13.1 tRNA pseudouridine synthase A compare
CCNA_02287 +2.2 12.4 TetR-family transcriptional regulator compare
CCNA_00756 +2.2 4.2 hypothetical protein compare
CCNA_02415 +2.2 10.2 Xre-family transcriptional regulator compare
CCNA_00167 +2.1 9.6 metallophosphatase family protein compare
CCNA_02124 +2.1 6.2 hypothetical protein compare
CCNA_01784 +2.0 2.5 hypothetical protein compare
CCNA_00470 +2.0 10.8 O-antigen polymerase compare
CCNA_02000 +2.0 1.2 SSU ribosomal protein S2P compare
CCNA_01059 +2.0 10.4 S-layer protein rsaA compare
CCNA_02448 +2.0 12.5 hypothetical protein compare
CCNA_02414 +1.9 7.5 DadA-related amino acid oxidase compare
CCNA_03234 +1.9 7.4 glutamine amidotransferase, class I compare
CCNA_03129 +1.9 12.6 peptidoglycan-specific endopeptidase, M23 family compare
CCNA_02339 +1.9 11.5 methyltransferase compare
CCNA_00435 +1.9 10.7 L-proline transporter (from data) compare
CCNA_03229 +1.8 12.4 FAD dependent oxidoreductase compare
CCNA_02244 +1.8 9.8 aminotransferase class I family protein compare
CCNA_03858 +1.8 9.0 protein translocase subunit secB compare
CCNA_02619 +1.7 11.2 stomatin/prohibitin-related protein compare
CCNA_03964 +1.7 2.5 hypothetical protein compare
CCNA_03637 +1.7 10.0 triphosphate tunnel metalloenzyme family protein compare
CCNA_03796 +1.7 11.0 tellurium resistance protein terC compare
CCNA_00255 +1.6 2.8 esterase compare
CCNA_01181 +1.6 7.3 hypothetical protein compare
CCNA_00284 +1.6 7.4 pyrimidine 5'-nucleotidase family protein compare
CCNA_02631 +1.6 3.3 P-loop NTPase-related protein compare
CCNA_03236 +1.6 7.8 spermidine/putrescine transport system permease protein potC compare
CCNA_03353 +1.6 7.0 metallophosphatase domain protein compare
CCNA_03235 +1.6 10.3 spermidine/putrescine transport ATP-binding protein potA compare
CCNA_02549 +1.5 8.2 glucokinase compare
CCNA_02330 +1.5 5.4 hypothetical protein compare
CCNA_03431 +1.5 11.4 membrane-bound lytic murein transglycosylase B compare
CCNA_00217 +1.5 1.2 thiol:disulfide interchange protein DsbD compare
CCNA_03864 +1.5 8.4 hypothetical protein compare
CCNA_00354 +1.5 6.4 NlpC/P60 CHAP domain amidase protein compare
CCNA_03975 +1.5 3.6 hypothetical protein compare
CCNA_03951 +1.5 5.5 hypothetical protein compare
CCNA_01430 +1.4 7.0 hypothetical protein compare
CCNA_00036 +1.4 2.4 ribosome-binding factor A compare
CCNA_01012 +1.4 1.9 N-formimino-L-glutamate deiminase compare
CCNA_02649 +1.4 3.2 PaiB transcriptional regulator compare
CCNA_00369 +1.4 9.0 magnesium and cobalt efflux protein corC-like protein compare
CCNA_01690 +1.3 4.7 MAPEG family membrane protein compare
CCNA_01724 +1.3 3.4 hypothetical protein compare
CCNA_01788 +1.3 2.6 hypothetical protein compare
CCNA_00443 +1.3 5.9 chemotaxis protein cheW compare
CCNA_03060 +1.3 1.6 hypothetical protein compare
CCNA_01729 +1.3 2.8 transporter, sodium/bile acid symporter family compare
CCNA_03961 +1.3 3.1 hypothetical protein compare
CCNA_03239 +1.3 7.6 spermidine/putrescine-binding protein compare
CCNA_00124 +1.3 6.5 hypothetical protein compare
CCNA_01164 +1.3 8.7 O-linked N-acetylglucosamine transferase compare
CCNA_02961 +1.3 7.8 NeuB-family N-acetylneuraminate synthase compare
CCNA_03238 +1.3 7.1 ABC-type spermidine/putrescine transport system, permease component II compare
CCNA_00271 +1.3 1.9 hypothetical protein compare
CCNA_02729 +1.3 7.1 oligopeptide transporter compare
CCNA_00017 +1.3 3.6 molybdopterin converting factor, small subunit compare
CCNA_02534 +1.3 1.5 hypothetical protein compare
CCNA_03312 +1.3 3.1 hypothetical protein compare
CCNA_00448 +1.3 5.7 cheU protein compare
CCNA_03385 +1.2 4.4 flagellin N-methylase compare
CCNA_02468 +1.2 2.2 hypothetical protein compare
CCNA_00931 +1.2 7.5 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase compare
CCNA_03499 +1.2 3.2 hypothetical protein compare
CCNA_00441 +1.2 4.4 chemotaxis receiver domain protein cheYI compare
CCNA_01756 +1.2 0.9 hypothetical protein compare
CCNA_02248 +1.2 1.3 hypothetical protein compare
CCNA_01774 +1.2 1.1 phosphoribosylglycinamide formyltransferase compare
CCNA_01914 +1.2 6.9 16S rRNA m(2)G 1207 methyltransferase RsmC compare
CCNA_00834 +1.2 6.1 flagellin FljM compare
CCNA_02464 +1.2 2.7 UDP-glucose 6-dehydrogenase compare
CCNA_02249 +1.2 3.8 conserved hypothetical cytosolic protein compare
CCNA_03813 +1.2 6.1 intermediate filament-like cell shape determinant creS compare
CCNA_00485 +1.2 8.3 ribosomal large subunit pseudouridine synthase D compare
CCNA_03650 +1.2 1.2 mannose-1-phosphate guanyltransferase compare
CCNA_03755 +1.1 1.6 bifunctional D-glycero-D-manno-heptose-7-phosphate 1-kinase/D-glycero-D-manno-heptose-1-phosphate adenylyltransferase compare
CCNA_00409 +1.1 0.8 hypothetical protein compare
CCNA_02966 +1.1 2.1 non-specific DNA-binding protein Dps/iron-binding ferritin-like antioxidant protein/ferroxidase compare
CCNA_01848 +1.1 4.3 quinol cytochrome oxidase polypeptide IV compare
CCNA_03280 +1.1 9.8 pyruvate ferredoxin/flavodoxin oxidoreductase family protein compare
CCNA_01742 +1.1 4.9 hypothetical protein compare
CCNA_03242 +1.1 6.0 succinic semialdehyde dehydrogenase compare
CCNA_01779 +1.1 2.7 hypothetical protein compare
CCNA_03150 +1.1 2.0 hypothetical protein compare
CCNA_00210 +1.1 8.3 TonB-dependent receptor compare
CCNA_00932 +1.1 4.9 6,7-dimethyl-8-ribityllumazine synthase compare
CCNA_01678 +1.1 6.0 arginine N-succinyltransferase, beta chain compare
CCNA_03799 +1.1 3.4 short chain dehydrogenase compare
CCNA_03439 +1.1 1.5 hypothetical protein compare
CCNA_01372 +1.1 4.8 lysine decarboxylase family compare
CCNA_01041 +1.1 4.0 hypothetical protein compare
CCNA_03240 +1.1 5.2 glutamine synthetase compare
CCNA_02221 +1.1 7.4 methionine synthase I metH compare
CCNA_01175 +1.1 3.8 uroporphyrin-III C-methyltransferase compare
CCNA_01859 +1.1 4.8 TonB-dependent receptor compare
CCNA_01851 +1.0 7.7 quinol cytochrome oxidase polypeptide II compare
CCNA_03863 +1.0 3.3 hypothetical protein compare
CCNA_01617 +1.0 3.3 acetyltransferase compare
CCNA_00028 +1.0 2.5 TonB-dependent receptor compare
CCNA_00547 +1.0 2.1 PurR-family transcriptional regulator compare
CCNA_00750 +1.0 5.9 FeaR-family transcriptional regulator compare
CCNA_00347 +1.0 1.7 hypothetical protein compare
CCNA_01168 +1.0 1.6 3-ketoacyl-CoA thiolase compare
CCNA_01224 +1.0 0.7 O-antigen membrane transport protein compare
CCNA_00226 +1.0 2.8 hypothetical protein compare
CCNA_02250 +1.0 1.3 methylcrotonyl-CoA carboxylase biotin-containing subunit compare
CCNA_00852 +1.0 0.5 TetR family transcriptional regulator compare
CCNA_00555 +1.0 3.8 nitrogen regulatory protein P-II compare
CCNA_00215 +1.0 5.7 SapC surface layer protein compare
CCNA_01959 +1.0 2.7 3-dehydroquinate dehydratase compare
CCNA_02424 +1.0 4.8 TetR-family transcriptional regulator compare
CCNA_03776 +1.0 4.5 2'-5' RNA ligase compare
CCNA_00142 +1.0 2.4 endonuclease compare
CCNA_02297 +1.0 3.9 hypoxanthine-guanine phosphoribosyltransferase compare
CCNA_02591 +1.0 3.1 glutaredoxin compare
CCNA_01278 +1.0 3.2 hypothetical protein compare
CCNA_03787 +1.0 1.9 heme exporter protein D CcmD compare
CCNA_01816 +1.0 4.3 nitrogen regulation protein ntrY compare
CCNA_01849 +1.0 5.2 quinol cytochrome oxidase polypeptide III compare
CCNA_02942 +1.0 1.5 nucleoside-diphosphate-sugar epimerase compare
CCNA_00267 +1.0 6.1 MutT-like protein compare
CCNA_01855 +1.0 3.5 iron/manganese superoxide dismutase compare
CCNA_03692 +1.0 5.7 xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family compare
CCNA_00312 +1.0 4.3 putative membrane spanning protein compare
CCNA_01858 +1.0 4.3 AraC-family transcriptional regulator compare
CCNA_00233 +0.9 5.8 UDP-N-acetylglucosamine 4,6-dehydratase compare
CCNA_01727 +0.9 4.7 methyl-accepting chemotaxis protein compare
CCNA_01155 +0.9 7.0 TonB-dependent outer membrane receptor compare
CCNA_00481 +0.9 1.2 HipB transcriptional regulator compare
CCNA_00447 +0.9 3.9 chemotaxis protein cheD compare
CCNA_00001 +0.9 2.3 ATP/GTP-binding protein compare
CCNA_03625 +0.9 5.3 transcriptional regulator CztR compare
CCNA_02243 +0.9 6.6 D-alanyl-D-alanine serine-type carboxypeptidase compare
CCNA_00257 +0.9 2.2 adenosylhomocysteinase compare
CCNA_02109 +0.9 1.9 thiamine biosynthesis protein thiC compare
CCNA_01856 +0.9 5.5 ferrichrome-iron receptor compare
CCNA_02779 +0.9 4.3 LysM family peptidoglycan binding protein compare
CCNA_00643 +0.9 1.4 hypothetical protein compare
CCNA_02060 +0.9 1.8 CrcB family protein compare
CCNA_00556 +0.9 4.4 phospholipase D compare
CCNA_03062 +0.9 5.5 cell wall hydrolase family protein compare
CCNA_01681 +0.9 2.9 RimI-like acetyltransferase compare
CCNA_01060 +0.9 2.4 type I protein secretion ATP-binding protein RsaD compare
CCNA_00281 +0.9 0.5 methionyl-tRNA formyltransferase compare
CCNA_02340 +0.9 4.6 methyltransferase compare
CCNA_00446 +0.9 4.1 chemotaxis receiver domain protein cheYII compare
CCNA_01973 +0.9 2.2 hypothetical protein compare
CCNA_02283 +0.9 3.4 HNH endonuclease family protein compare
CCNA_01103 +0.9 0.6 ADP-heptose--LPS heptosyltransferase compare
CCNA_03232 +0.9 1.2 toxin protein relE-4 compare
CCNA_01541 +0.9 5.0 LysR-family transcriptional regulator compare
CCNA_03314 +0.9 3.0 ferredoxin-NADP reductase compare
CCNA_01204 +0.9 4.8 dTDP-glucose 4,6-dehydratase compare
CCNA_03318 +0.9 3.2 DNA polymerase Y-family protein ImuB compare
CCNA_02156 +0.9 4.8 hypothetical protein compare
CCNA_01751 +0.9 2.1 aminodeoxychorismate lyase compare
CCNA_01676 +0.9 0.5 hypothetical protein compare
CCNA_00998 +0.9 5.4 ROS/MUCR transcriptional regulator compare
CCNA_03856 +0.9 4.1 membrane-bound lytic murein transglycosylase A compare
CCNA_02151 +0.9 3.3 exodeoxyribonuclease VII small subunit compare
CCNA_00964 +0.9 1.7 gluconate kinase compare
CCNA_00929 +0.9 5.4 Riboflavin-specific deaminase family protein compare
CCNA_02363 +0.9 3.2 hypothetical protein compare
CCNA_03057 +0.9 1.8 glyoxalase family protein compare
CCNA_00762 +0.9 2.1 hypothetical protein compare
CCNA_01025 +0.9 4.7 hypothetical protein compare
CCNA_01860 +0.9 4.1 iron-regulated membrane protein compare
CCNA_00433 +0.8 3.8 type 1 capsular polysaccharide biosynthesis protein J compare
CCNA_02620 +0.8 2.2 hypothetical protein compare
CCNA_01509 +0.8 3.4 3-oxoacyl-(acyl-carrier-protein) synthase III compare
CCNA_02913 +0.8 4.4 hypothetical protein compare
CCNA_03728 +0.8 2.7 hypothetical protein compare
CCNA_01173 +0.8 4.4 chorismate mutase compare
CCNA_02130 +0.8 4.6 pyruvate kinase compare
CCNA_03888 +0.8 3.6 hypothetical protein compare
CCNA_03256 +0.8 0.6 chorismate synthase compare
CCNA_03643 +0.8 0.6 succinate dehydrogenase membrane anchor subunit compare
CCNA_00150 +0.8 4.7 PDZ domain family protein compare
CCNA_01847 +0.8 5.4 cytochrome c oxidase assembly protein Surf1 compare
CCNA_02666 +0.8 3.0 chemotactic signal-response protein CheL compare
CCNA_02068 +0.8 3.1 Mth938-like membrane protein compare
CCNA_00442 +0.8 5.9 chemotaxis histidine kinase protein cheAI compare
CCNA_01716 +0.8 0.8 hypothetical protein compare
CCNA_00444 +0.8 4.9 chemotaxis protein methyltransferase compare
CCNA_02766 +0.8 1.7 hypothetical protein compare
CCNA_01240 +0.8 2.3 two-component response regulator compare


Specific Phenotypes

For 10 genes in this experiment