Experiment set7IT033 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Varel_Bryant medium with Zinc Pyrithione 0.0125 mM

200 most important genes:

  gene name fitness t score description  
BT3395 -5.3 -6.3 N-succinylglutamate kinase (EC 2.7.2.-) (from data) compare
BT1857 -4.7 -6.4 3-isopropylmalate dehydrogenase (NCBI ptt file) compare
BT2074 -4.3 -7.2 ketol-acid reductoisomerase (NCBI ptt file) compare
BT1377 -4.3 -2.9 phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase (NCBI ptt file) compare
BT3757 -4.2 -7.5 pyrroline-5-carboxylate reductase (EC 1.5.1.2) (from data) compare
BT1843 -4.2 -5.7 adenylosuccinate synthetase (NCBI ptt file) compare
BT3918 -4.1 -4.8 pyridoxal phosphate biosynthetic protein pdxJ (NCBI ptt file) compare
BT1861 -3.9 -5.9 2-isopropylmalate synthase (EC 2.3.3.13) (from data) compare
BT3760 -3.9 -3.8 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
BT3718 -3.8 -9.9 gamma-glutamyl phosphate reductase (NCBI ptt file) compare
BT3759 -3.8 -8.1 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) compare
BT2402 -3.7 -10.7 homoserine phosphotransferase HomK (from data) compare
BT3933 -3.7 -6.2 prephenate dehydrogenase (EC 1.3.1.13) (from data) compare
BT1607 -3.7 -3.6 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT3733 -3.7 -13.4 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
BT2078 -3.6 -9.4 dihydroxy-acid dehydratase (NCBI ptt file) compare
BT3758 -3.6 -6.0 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
BT1153 -3.6 -5.5 phosphoserine aminotransferase (NCBI ptt file) compare
BT0738 -3.6 -2.5 serine hydroxymethyltransferase (NCBI ptt file) compare
BT3549 -3.5 -5.9 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) compare
BT1374 -3.5 -4.1 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) compare
BT0202 -3.5 -4.1 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
BT2403 -3.5 -9.5 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) compare
BT2401 -3.4 -10.7 threonine synthase (NCBI ptt file) compare
BT3717 -3.4 -4.0 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) compare
BT0201 -3.4 -3.3 histidinol dehydrogenase (NCBI ptt file) compare
BT1858 -3.2 -5.8 (R)-citramalate synthase (EC 2.3.1.182) (from data) compare
BT3320 -3.2 -8.0 dihydrodipicolinate reductase (NCBI ptt file) compare
BT1860 -3.2 -5.2 3-isopropylmalate dehydratase large subunit (NCBI ptt file) compare
BT2076 -3.1 -7.7 acetohydroxybutanoate synthase regulatory subunit (EC 2.2.1.6) (from data) compare
BT1859 -3.1 -3.0 3-isopropylmalate dehydratase small subunit (NCBI ptt file) compare
BT0530 -3.0 -4.6 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) compare
BT2836 -3.0 -16.0 2-oxoglutarate synthase subunit korA (NCBI ptt file) compare
BT3253 -3.0 -2.9 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT3719 -3.0 -4.1 glutamate 5-kinase (EC 2.7.2.11) (from data) compare
BT3936 -3.0 -2.9 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) compare
BT1375 -2.9 -12.9 aspartokinase (NCBI ptt file) compare
BT0529 -2.9 -2.0 indole-3-glycerol phosphate synthase (NCBI ptt file) compare
BT1378 -2.9 -2.8 imidazole glycerol phosphate synthase subunit hisF (NCBI ptt file) compare
BT0892 -2.9 -1.9 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT2077 -2.9 -6.9 acetolactate synthase large subunit (NCBI ptt file) compare
BT3361 -2.8 -8.4 erythronate-4-phosphate dehydrogenase (NCBI ptt file) compare
BT0700 -2.7 -4.6 GTP pyrophosphokinase (NCBI ptt file) compare
BT1379 -2.7 -4.6 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
BT3193 -2.7 -11.4 putative coenzyme A transferase (NCBI ptt file) compare
BT1844 -2.7 -5.4 transcriptional regulator, putative iron uptake regulation protein (NCBI ptt file) compare
BT2415 -2.7 -10.3 aspartate aminotransferase (NCBI ptt file) compare
BT0528 -2.7 -3.2 phosphoribosylanthranilate isomerase (EC 5.3.1.24) (from data) compare
BT0527 -2.7 -3.1 tryptophan synthase alpha chain (NCBI ptt file) compare
BT0532 -2.7 -5.3 anthranilate synthase component I (NCBI ptt file) compare
BT1152 -2.6 -3.1 D-3-phosphoglycerate dehydrogenase (NCBI ptt file) compare
BT2837 -2.6 -12.9 2-oxoglutarate synthase subunit korB (NCBI ptt file) compare
BT2129 -2.6 -6.2 aspartate--ammonia ligase (NCBI ptt file) compare
BT3761 -2.5 -4.5 N-succinylglutamate synthase (from data) compare
BT1970 -2.5 -9.4 glutamate dehydrogenase (NCBI ptt file) compare
BT1476 -2.3 -4.1 aspartate aminotransferase (NCBI ptt file) compare
BT4211 -2.3 -1.6 putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) compare
BT1444 -2.3 -2.6 conserved hypothetical protein (NCBI ptt file) compare
BT3394 -2.2 -9.3 putative arginine decarboxylase (NCBI ptt file) compare
BT3184 -2.2 -12.0 L-aspartate oxidase (NCBI ptt file) compare
BT1976 -2.2 -1.4 hypothetical protein (NCBI ptt file) compare
BT0200 -2.1 -2.9 ATP phosphoribosyltransferase (NCBI ptt file) compare
BT2080 -2.1 -4.2 L-cysteine desulfidase cdsB (from data) compare
BT1381 -2.0 -5.3 formyltetrahydrofolate deformylase (NCBI ptt file) compare
BT3035 -2.0 -10.4 carboxy-terminal processing protease precursor (NCBI ptt file) compare
BT0891 -2.0 -1.3 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT1733 -2.0 -3.0 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) compare
BT0531 -2.0 -2.9 anthranilate synthase component II (NCBI ptt file) compare
BT0203 -1.9 -2.9 histidine biosynthesis bifunctional protein hisB (NCBI ptt file) compare
BT3371 -1.9 -3.9 putative glycosyltransferase yibD (NCBI ptt file) compare
BT3369 -1.8 -1.2 putative glycosyltransferase (NCBI ptt file) compare
BT1270 -1.8 -5.2 putative Na+/H+ antiporter (NCBI ptt file) compare
BT3164 -1.8 -7.0 quinolinate synthetase A (NCBI ptt file) compare
BT0427 -1.8 -1.7 xanthine phosphoribosyltransferase (NCBI ptt file) compare
BT3372 -1.8 -5.5 glycosyltransferase (NCBI ptt file) compare
BT1380 -1.7 -1.7 imidazole glycerol phosphate synthase subunit hisH (NCBI ptt file) compare
BT2742 -1.6 -1.0 integrase, site-specific recombinase (NCBI ptt file) compare
BT4699 -1.6 -2.8 putative hydrolase, haloacid dehalogenase-like hydrolase (NCBI ptt file) compare
BT2417 -1.6 -1.9 conserved hypothetical protein (NCBI ptt file) compare
BT1369 -1.6 -1.8 hypothetical protein (NCBI ptt file) compare
BT1336 -1.6 -3.7 putative translation initiation inhibitor (NCBI ptt file) compare
BT3374 -1.5 -6.1 putative carbamoyl-phosphate-synthetase (NCBI ptt file) compare
BT0876 -1.5 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT1117 -1.5 -2.0 conserved hypothetical protein, with a cAMP-binding domain (NCBI ptt file) compare
BT3866 -1.5 -6.8 ammonium-dependent carbamoyl phosphate synthetase CarB2 (EC 6.3.4.16) (from data) compare
BT2389 -1.5 -2.0 putative transport protein (NCBI ptt file) compare
BT4753 -1.5 -1.3 hypothetical protein (NCBI ptt file) compare
BT2003 -1.5 -1.7 putative membrane peptidase (NCBI ptt file) compare
BT4551 -1.4 -1.6 putative GTPase, ThdF family (NCBI ptt file) compare
BT0771 -1.4 -4.6 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file) compare
BT1752 -1.4 -1.6 hypothetical protein (NCBI ptt file) compare
BT2843 -1.4 -3.4 integrase (NCBI ptt file) compare
BT2344 -1.4 -1.5 hypothetical protein (NCBI ptt file) compare
BT0747 -1.4 -0.9 putative phosphatidylinositol-4-phosphate 5-kinase (NCBI ptt file) compare
BT0611 -1.3 -1.5 glycosyltransferase (NCBI ptt file) compare
BT4610 -1.3 -2.1 RecA (NCBI ptt file) compare
BT3762 -1.3 -3.0 arginine repressor, transcriptional regulator of arginine metabolism (NCBI ptt file) compare
BT0533 -1.3 -1.9 tryptophan synthase beta chain (NCBI ptt file) compare
BT1515 -1.3 -4.5 conserved hypothetical protein (NCBI ptt file) compare
BT1326 -1.3 -1.4 TPR-domain containing protein (NCBI ptt file) compare
BT2546 -1.3 -4.4 transcriptional regulator (NCBI ptt file) compare
BT4265 -1.3 -0.8 GMP synthase (glutamine-hydrolyzing) (NCBI ptt file) compare
BT2169 -1.3 -3.7 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1220 -1.3 -1.2 6-phosphogluconolactonase (NCBI ptt file) compare
BT1535 -1.3 -1.8 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT1912 -1.2 -2.2 hypothetical protein (NCBI ptt file) compare
BT4310 -1.2 -8.4 NADPH-dependent glutamate synthase small chain (NCBI ptt file) compare
BT2281 -1.2 -1.3 hypothetical protein (NCBI ptt file) compare
BT3980 -1.2 -1.3 hypothetical protein (NCBI ptt file) compare
BT0954 -1.2 -2.2 conserved hypothetical protein (NCBI ptt file) compare
BT3730 -1.2 -1.1 putative regulatory protein (NCBI ptt file) compare
BT2375 -1.2 -2.3 hypothetical protein (NCBI ptt file) compare
BT0100 -1.2 -3.5 hypothetical protein (NCBI ptt file) compare
BT4304 -1.2 -7.9 putative glycosyltransferase (NCBI ptt file) compare
BT4097 -1.2 -1.3 Trk system K+ uptake protein trkH (NCBI ptt file) compare
BT2142 -1.2 -1.3 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT3370 -1.2 -1.6 putative glycosyltransferase yibD (NCBI ptt file) compare
BT3373 -1.2 -2.8 spermidine n1-acetyltransferase (NCBI ptt file) compare
BT4702 -1.2 -1.7 dihydroxynapthoic acid synthetase (NCBI ptt file) compare
BT4098 -1.1 -1.1 Trk system K+ uptake protein trkA (NCBI ptt file) compare
BT1972 -1.1 -7.2 phosphoenolpyruvate synthase/pyruvate phosphate dikinase (NCBI ptt file) compare
BT2075 -1.1 -2.6 acyl-ACP thioesterase (NCBI ptt file) compare
BT3375 -1.1 -5.1 aspartate aminotransferase (NCBI ptt file) compare
BT2932 -1.1 -1.7 transcriptional regulator (NCBI ptt file) compare
BT3935 -1.1 -2.8 aminotransferase (NCBI ptt file) compare
BT3712 -1.1 -2.7 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) compare
BT1845 -1.1 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT3887 -1.1 -2.2 hypothetical protein (NCBI ptt file) compare
BT2153 -1.1 -1.9 putative Fe-S oxidoreductases (NCBI ptt file) compare
BT1363 -1.1 -0.7 DNA Pol III Epsilon Chain (NCBI ptt file) compare
BT3223 -1.1 -2.8 hypothetical protein (NCBI ptt file) compare
BT1837 -1.1 -4.5 putative GTP-binding protein, putative GTPase (NCBI ptt file) compare
BT3074 -1.1 -3.3 conserved hypothetical protein (NCBI ptt file) compare
BT1348 -1.0 -4.0 CDP-abequose synthase (NCBI ptt file) compare
BT0795 -1.0 -1.8 conserved hypothetical protein (NCBI ptt file) compare
BT1689 -1.0 -2.0 oxaloacetate decarboxylase beta chain (NCBI ptt file) compare
BT1948 -1.0 -2.0 hypothetical protein (NCBI ptt file) compare
BT2691 -1.0 -3.1 methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
BT1701 -1.0 -1.4 hypothetical protein (NCBI ptt file) compare
BT1746 -1.0 -1.0 conserved hypothetical protein (NCBI ptt file) compare
BT1565 -1.0 -1.8 hypothetical protein (NCBI ptt file) compare
BT3268 -1.0 -1.3 glucose-inhibited division protein A (NCBI ptt file) compare
BT4339 -1.0 -1.3 glutamine synthetase (NCBI ptt file) compare
BT3801 -1.0 -2.3 rteB, two-component system response regulator (NCBI ptt file) compare
BT1979 -1.0 -2.7 Meso-diaminopimelate D-dehydrogenase (NCBI ptt file) compare
BT1747 -1.0 -2.8 pyruvate-flavodoxin oxidoreductase (NCBI ptt file) compare
BT2170 -0.9 -3.5 hypothetical protein (NCBI ptt file) compare
BT0084 -0.9 -2.5 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT3920 -0.9 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT1608 -0.9 -4.0 capsule biosynthesis protein capA (NCBI ptt file) compare
BT0596 -0.9 -1.0 putative transcriptional regulator (NCBI ptt file) compare
BT4029 -0.9 -2.1 hypothetical protein (NCBI ptt file) compare
BT2172 -0.9 -5.9 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT4161 -0.9 -1.9 hypothetical protein (NCBI ptt file) compare
BT1854 -0.9 -0.8 putative membrane-associated phospholipid phosphatase (NCBI ptt file) compare
BT3856 -0.9 -2.1 hypothetical protein (NCBI ptt file) compare
BT0418 -0.9 -1.6 outer membrane porin F precursor (NCBI ptt file) compare
BT4778 -0.9 -2.5 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT4586 -0.9 -3.2 conserved hypothetical protein (NCBI ptt file) compare
p5482_02 -0.9 -3.7 hypothetical protein (NCBI) compare
BT0242 -0.9 -1.5 putative polysaccharide deacetylase (NCBI ptt file) compare
BT0702 -0.9 -2.0 chloramphenicol acetyltransferase (CAT-III) (NCBI ptt file) compare
BT0631 -0.9 -1.3 conserved hypothetical protein (NCBI ptt file) compare
BT4416 -0.9 -2.4 Cu2+ homeostasis protein CutC (NCBI ptt file) compare
BT0783 -0.9 -1.0 hypothetical protein (NCBI ptt file) compare
BT1332 -0.9 -2.6 conserved hypothetical protein (NCBI ptt file) compare
BT4428 -0.9 -1.9 hypothetical protein (NCBI ptt file) compare
BT4616 -0.9 -2.6 conserved hypothetical protein (NCBI ptt file) compare
BT4751 -0.9 -1.9 hypothetical protein (NCBI ptt file) compare
BT2845 -0.9 -3.8 conserved hypothetical protein (NCBI ptt file) compare
BT0352 -0.9 -1.1 conserved hypothetical protein (NCBI ptt file) compare
BT0780 -0.9 -1.7 acetyltransferase (NCBI ptt file) compare
BT0067 -0.9 -1.5 hypothetical protein (NCBI ptt file) compare
BT0782 -0.9 -1.1 hypothetical protein (NCBI ptt file) compare
BT1443 -0.9 -3.5 8-amino-7-oxononanoate synthase (NCBI ptt file) compare
BT4325 -0.9 -2.5 hypothetical protein (NCBI ptt file) compare
BT1851 -0.8 -1.6 TPR-repeat-containing protein (NCBI ptt file) compare
BT3168 -0.8 -4.1 putative Fe-S oxidoreductase (NCBI ptt file) compare
BT4271 -0.8 -1.8 hypothetical protein (NCBI ptt file) compare
BT0567 -0.8 -1.3 putative protein involved in barrier function of the cell envelope (NCBI ptt file) compare
BT2539 -0.8 -2.6 rubredoxin (NCBI ptt file) compare
BT1836 -0.8 -4.3 thiamine biosynthesis protein ThiH (NCBI ptt file) compare
BT0639 -0.8 -1.4 conserved hypothetical protein (NCBI ptt file) compare
BT4017 -0.8 -2.3 hypothetical protein (NCBI ptt file) compare
BT1540 -0.8 -2.3 transcriptional regulator (NCBI ptt file) compare
BT1990 -0.8 -1.2 hypothetical protein (NCBI ptt file) compare
BT1358 -0.8 -2.1 putative transcriptional regulator (NCBI ptt file) compare
BT0503 -0.8 -1.3 hypothetical protein (NCBI ptt file) compare
BT1055 -0.8 -1.4 pyruvate formate-lyase activating enzyme (NCBI ptt file) compare
BT0087 -0.8 -1.7 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0383 -0.8 -2.4 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT0679 -0.8 -1.5 cation efflux system protein czcB (NCBI ptt file) compare
BT4558 -0.8 -2.1 conserved hypothetical protein (NCBI ptt file) compare
BT0560 -0.8 -1.3 outer membrane efflux protein (NCBI ptt file) compare
BT4237 -0.8 -2.6 tRNA pseudouridine synthase A (NCBI ptt file) compare
BT4042 -0.8 -5.5 putative Mg2+ transporter MgtE (NCBI ptt file) compare
BT0028 -0.8 -2.0 alkaline phosphatase (NCBI ptt file) compare
BT1576 -0.8 -1.2 conserved hypothetical protein, with a conserved domain (NCBI ptt file) compare
BT3376 -0.8 -3.3 nucleotide sugar transaminase (NCBI ptt file) compare
BT4303 -0.8 -5.3 glycogen debranching enzyme-related protein (4-alpha-glucanotransferase) (NCBI ptt file) compare


Specific Phenotypes

None in this experiment

For Bacteroides thetaiotaomicron VPI-5482 in stress experiments

For stress Zinc Pyrithione across organisms